XLOC_002261 (gene) - C. hemisphaerica

Overview
NameXLOC_002261
Unique NameXLOC_002261
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000039:324990..332149+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002261 ID=XLOC_002261|Name=XLOC_002261|organism=Clytia hemisphaerica|type=gene|length=7160bp|location=Sequence derived from alignment at sc0000039:324990..332149+ (Clytia hemisphaerica)
CCAGATACATTATGCAAAACCCAGATACATTATGCAAAACCCAGATACAT TCTGTAAAACCCAGATACATTATGCAAAACCCAGATACATTATGCAAAAC CCAGATACATTCTGCAAAACTTTCtgaaatcttttaaatttgCTTCGAAG ATTTTCCGAAATTTTGTAATGATAGCTGTTATGTCACGATTTATATTGAT ATTTATGTTTTAGTAAAAATAAGTAAACTTGGTGGATAACGACATGTAAT TACTAAGATGAGAAAATGTTAACATCATGTTCAGTATGAACCTGGGTTTT CAGAATCAAAGAAATATATGGCTGTCATTGTCCTGTCCATCTCCTCAATG AGAGGTGACATGTTATGAGAAGCTTTCGATTTGCGGCTAGCAGTTTTCGG TGAGTGAATTTATTTTAAAGTAATTATTGATATAACACAAGATTTGTTTG CCCTGCTGATCTCAAGGTGGAAGAGTTTATATACgataaaaaacttattt ttataaaactcGTTCGTgttgtttttaatgaattttattCAAAACACAAG AAATAGAGATTTTGAAAGCTACGAGGAGACACCAAAAGTTCGAAAGCGAC AAGTTAATCTGATGAAAGCAACTCCCTCTTGCTAGACGAGAGTTATGGAA GGCAAACAAATAATACGACAAGATAGAGAGGTTATCAGTTAATGTTTTGA ATACTTCTCAACTCATTTGGTCTGTCGTCAAGGAAACGTAACGATCGATT GATACTACGTGTATTTTTTGTGAAACAATTAGTTGCTGTTTTATAATCAA AAAAATGATGGTATTAGAAAAGATGCAGTGTTTCTGATGTTATGAGCTTA TGTTATTATAACAGCAAAATGTTCTTGTTCCTTTTGGTTGTTAACGTTTT GCAATNGCTGATGTTATTATAacagcaaaatgtttttgttcCTTTTGGTT GTCAACGTTTTGCAATTTTGTGGTTGTGAACTTCTGGAACCGAAGAACGT GAAACGGAAAGTTAACCTTAAAGGTGAGAGTTTCTTCTTTTACTCaactt ttgaaattcttttcgaTATTCGTCTCAGAGAATTTAAATGATATACTTTT GTGGTTTGTTTTCCTCTTTAACCTCAATCTCATCATAAATCTCATTTTTA ATGAGAGCTTGATTTAAATCAGTCAAGTCACCAGAAGTCACTATTTTTAT AACGTTCTTTCTTTGACCAGAATTAAGCTACTTAAATTAGACATCTGTTC TGACTACTTTTAAAGCCTTCCCCATATTGAATATCCAAAAATCCAGCAAT ACTGAAGTGTTTTTACTATGTATCgtgcatacacgctttttttataagaa tacactttataagaatgtccatgatgaaaatggccaaaaaatgaagaata tgctcagaatatcaccatcatagaattttgctactcaagctaagaatgcc attttagaccattttttagtcaattaggatcctaacctaagaatgctgta agaatattctaggatgattttcccaaaaaagttaagaataaccatgatga aatggatttacaccattcttataaaaaaaaagcgtgtagtattGTTGACA AGCCGATAGTTTCGTAATTTGTTTTATCTTGTCTCACTGCACCGCCCCTT GAAAGATGAGACGACGTATTTTGTTAAAACGATGATAACGTTAAGTGACA CTATTTATTGTATTGTTCTCTTTTCCAGATATCTCGAAGCTTGTGCCACT CAATTTTGTAGCAGACACAGCTGGTATCGGAGATTTTGACCCTGAGAAAA ATGGACTTCTTATACACGAAtattttgatcaattatatAAGAAATATCCA CAGTATAAGAAATTCTCTGAACTTCAAGATGAACAGATTTTAATGGTGGA TCCTTTTAAAGACAAAAATAACCCGTATGCTGACGCTGTGAAAAAGTTTA AATGGGTTTTAGAATCCATATATCAAGACAATGGAGGTAAACTGGAttct gaaaaatcggggaaCAATGACGCCCGATTTCAATTAGATTCTGCAGAGGT TGCAGAATATGAGCGTCCAACTGTACCTCCCTTATCAGAAATTCAAACAC CAGCAGATGTTGATGATTCAGATAATTTGTATGATGGAGATAATATACAA TTGGATATCGATGGAGATGATGATGGGGATAATTTAAATGAATTTAAGTA GTGAATGACACACAATTTTGTATATAATTTTTCTAGTTTCTTTAAAAGAA AGCTGTCACTAGCTATTGAATTTCCCAAACGTTATTAGTGTGCTCACATT TCGTAGGAGTGAAGGTATTTAGGACACATTAAAGGTGCGAATCTAAAAAG TAGACGCTAGCGTTCCAAACCATTTATAAGCAATCTTATAGGCGTTGGTG GTTTAAGCCCAAACAATTTGCTTCTTGAAACAATTTTAATAAGTTGTAAT AAAATGTTAAATGTTATGATTTGTGAATTGATAATTTTATTAAGTTCGAA GTATTATGGTGTCatcatttttcttaaaataactcCAAAACCACCAAAAT GTATAAACTTCTGACATTAAAATGAGAAGGAAGTCCCTATTCCTTTGATT CATTTGCATTCATTAAGAAAATTTGTGTCGTCATCATGACGTTTCGCGTG TCACAAATTAACACCTCCCCTTAGCCCTTTGTCGAGAAGCAAACTCACTC CAGGTTCAAACttctacattttttataagcaatcagtTGGCTAAGGCTCC AAGACTCAAACTTGccaatttatttttcatctcgtaaagtaaaagttttt ttgataatCTAACCATAGCAAGggatagcccttgacccaataacttaaat atataaatattgtataatatcaggggtggtcaaagtAAACTTtccagaaa atgagctagaatacTATGCAACTCCAGGGCTGACCCGAAAATTGcaattg cttataaaaaaatatgtaccaATGAATGCAATGCAGAATTTTAGGATTTT CAAGAGTTAACAATCTTGTACTGTTTCGCCACTTAAAATGAAATGTTCTT GTTGTCTTTTAGACTTTTCCGTTTATTACTTAGCTCTAGTTCAGACAAAT TACTTTCTGTTCTCTCAATTCCAATTTTCAAAGCAGACGAAAAGTGGGCA GAAAGTttgcagttaaaatctttgcttgaaaaagattaaatgaagtcatt gcattaaACACCCACTGGGATCCCTTCTCACTGGAAAGTTTTGCagaaat atcgtccccagttgAAAATTAtgctccaatttttgtccccattgaaaata atcaaataaacctcAAATAATGAACctaactgcaaaatattttgctattt ttcccttccaaactaaattttctgacttgaaaacaatggaatttaaatct GTGAAAAGGGTCTCCAATCTCCAGTTTCAATTCGTTATTTTTGCCCCCAC TGgttgaaaaaaatcctaccgggtctgtgaaaaaGGTGTGAAAAGGGTGA TATTGAAGTCAAAAGAGGGTAATGCAATGGACCATTCTGTGAAATTGTCA ACTATGATTGGAGAGTATATGCTCGATTGGTATATGGATATCGTAGCGTA GGTCACCACTGGCGGTATCCAGCTCGGAAACAATCGGAATATGCAGGGCG AATAGAGCGTAGGTTCTCCATCTCCTAGTGAGTGGAAGGTAACTGGGGAC TTAAAAATGAGTCTTCCATTCAATATGAAGAATTCGAGATGCTTTGGGTA TAATTTTGGTCTCAAAGGGACCCAATGTAAGAGCAAAAATGTTAgggttt ttcttttaatttcttttgatcTTTTTTACCAGAATCTAATGGATAAATTA TTTGTAACTGTCAGCTTTGGAAAAAATTCGATTGATGATTCTGATTTTCA CGGTCGAGATAAATACGCTATTACAGGCTGTCTATAGTGTCAATATTTCC ATGCTGATGAGGTAATATGACTCAATAAATTTCACCAAAACTTTTATGCC TTTTATGCCTTTTTACTTATAACCTCTGTTGTTCATGCATTTTTACGGTC TTAGTAATTTCTTCATCTGCCAATCAAACTAAACtcaactgtcaatcaaa taaattAACACCAATCAATGACAGTATAGATCATGCCGCTCTATTTCTCG TGCCTCTCTCCAACCAAAATTTTTGTcatcttaattttaaacagtttaAG AGGAATTTTCGAGGAGATGTTAAATGAAAAAGGGAGTTTCTTTATTAATT CATTAGAAAGCAAACCTCTTCCCTGTCGGTTTACATGTGCATGAAATAGT AGCTTATGACTTCCCTATGAAAATATTATACTCATGCTGCTGATTTATTG CTTTGTTCTCTGTTCAGATGCACAAATCTACTTATTTTCACCAGTTCTGA TTTAAAGTACGCCCccgggggtactacccttgccgaccgacgagggtgct ccgctgaggttcgaaaaatggactcTACTTGGgattcgttttttcaaaaa ttttgccgaaatttgcgaaaaaagtgaccctttgaatgggactaaaattc caaaattttctcaaattttctactttttcctaaattttccaaaaaaggca cccttcgAGGAACTGatgtgtttttgcgaccctacctgggacttgtggag gttaaaaaaNttactttttccccaaattttccaaaaaaggcaccctacga ggaactgatttttctattttggtgtttttgcgaccctacctgggacttgt ggaggttaaaaaaggtaccctgaccagcggcgtatctccgtaacccattt tgccgtAGTACCCCCCTCCCCGGGGATACGCCtcgttttagaaaaaattc cttttggaaatatttaagaatattttaaagtaATCTAACTTTTGTAATGC CTTTTGCCTTCTGTAATGTTATAATACTCCCTCATTTCTTTTGATTTGCG ATGTATGTTAAGTAAACAGAAATGCggccaaacaaaagaaattgatgAAC AATAAACTTGTCAGCACCAAAACGCAAATCTCGTTAAATCTTAAAGGTTA AAATTAAGGGAaggaaaaaaaactgttttataaATTAAAACTTCATTAAA TAGCCTATTTCataattgatttttcttttcttttttccaaaaggTTTTTT TCAACTCGTTGCTTTGATGCGCCATCTTGTCAAAGAGTCATCTCAACCAA TTGACACATGTTAAAAGCGGACATAGGATCCAATCGTTAATTAATGCTTA TGATGTTCAAGATGTATAaaacccttcatatatttgtggTCGGCAGGAAT GACAGATTTTCTTTCGACATCTCAACTCAACCAAGTCAACTAAACATTAA GCACGACTCGAGACAGGATGACAGGCTTTTTGATAGACGATATTTTAAGC AAGAAAGTGGCCAAAGAAAATGAGACGATACATGTGAGATCAGCATTCCT CCCAACTCAATCTGGTAAATTGAATATCCACTGTGAAAGGAATATTATTT TTGTCCTTGCCAAATATATTCTCAAAATAAATTACgcctaaattttgatt ttttggcgCAATTTTATCTTCctcgatttttgaattttgaaagtaaacAT AATTACATTTTTATTTCAGATCACCATTGCAAACGTCTCTACGCGCCGCC CCTTCCGCCTTTGCTACCACCATCAAACCACCATTACCACCCTTATCATC GACATCACCGCTTCTATCGTTCCCGATCACCCCCGCCTGCTATTTCACCT CGTTCATCACACTCAGACGATTTGGATCTTGACAAACTTTCACGACGACC ACGGACTTCAATCACTATGTGCCAAAGAGAATTTCTGGAAACGGAGTTTC AGAAAGAAAGATACCCGACACTGGCGTACATTGACAAACTATCACGCAAA GTCCACTTACAACAATATGTCATAAAGGTAAGCCTCTCCCatattattca aaattaatGTGATGCACTATCTATCTTGTACGTCTTAcggtagtccgaca ctttcttgTCCGACAATAAAACATTCCGAAAACAATCGAAATGGAATCAG CCCGGAAGTATATTTACTCCGACTGCTCTTTTGTCCGAAGACAATCGcat attgttttttattattcaCGATTCGGACTTTGAAGACTCCCCGCGTTGTC ATGATTTTCTCAGGTGGGGCTAAAGATTCGTTCTATTTCATACGAGGTAG ACAGAAACAATTCTAAAGGTCTCTAGTGAAAGAGAACAAGATCAATCATT AAGTTTAGCTGTAAGTTTCCTGATAATGATTTTCTATAACCAAAGCTTCA ACTTATGATCGGTGGATCGGACGTCGGCTGTCGGTGGTCGCTTAAATTCC CTGACTGTTTCGTTAGCAATTGGTAGAGAAATCTACTTTTGGTGGAATTG TCATACTTGGCAACTTTTGGGTCTATTTTAACGAATTTCAACCCCTTTTT TCACGGTAATGATACAAGGGTGTTCCTAGGAAAAATTTTAATCTAGAAGA ACAAGCTAGTCGGAtaaagataaagatttttgttgtTCCATTTCAGGTTT GGTTTCAAAATCGGAGAGCAAAATATCGAAAAGAAGGGCACCGTCGAAAA CCTTCCAAAGAAGACACAAACACAAAACCTgagtattttacagaacgaAA AGAAAGCAAAGACGACAAAGTACATTTATTGAAAGTTCATTCTTCCGAAA AATACACACCAGCTTCAGCAACGAAATATAGTGGACGGTATCTCTATAAT GAAAGGAATTCAGCACAAACGTTGCTATGGCAACCTCGAATGAAATCATC TTGCGAAGAGCATTGTGGGTGCTTCACGTGTGGGTGATTGACCGATCTTC TATTGAATCGATTAATTGACTTCATATTGCGCTAATTAATGAATTCACTT ATTTACTGTTTTGTCGGAATCCTTATTCTCACTGACATTCAAAATAATCA TCAAGTTCATAATTACATGGGATGTTTAAATTTAGTTTCTAGTTGTGTAT TATAGATTGTATTATTCAATTATTGTATTAtataaattccttattttttt atcatatctttttgtttttcgttGCATTTTATTGAAGAGTATTTATTGGT TGTTGATATTTATTTGAGAATTtattcagaaaaagaaaattattactTGT TTACTATAAt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004025TCONS_00004025Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00004025-proteinTCONS_00004025-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000039supercontigsc0000039:324990..332149 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.42 7.8 1.65 0.96 1.2 1 1.85 2.44 1.73 1.78 1.08 1.35 4.92 4.17 1.39 1.4 3.29 3.35 6.42 6.75 4.91 4.41 4.68 5.73 4.41 6.69 12.12 6.74 2.47 2.83