XLOC_002272 (gene) - C. hemisphaerica

Overview
NameXLOC_002272
Unique NameXLOC_002272
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000039:635782..642446+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002272 ID=XLOC_002272|Name=XLOC_002272|organism=Clytia hemisphaerica|type=gene|length=6665bp|location=Sequence derived from alignment at sc0000039:635782..642446+ (Clytia hemisphaerica)
GTCTTAATTTGGTGCGTAAAGACGGGGGTCAAAAACACGACAAGGTCATG CTATATAAAGTGAATTTCATTACAATTTTAACATATCAGTGATTTTGCTT TGATTGACGATAATGAAGTTATTAGTTGTATTCGCTGCTCTTATTGCTTT TGCTGGAGGTAGATATGACTGCTCGCTTATAATTCTATTGCTAACAACGT TTATACTCGAGCCATCGATATGactgcccagctggcacacaacgttgttt caacgtttatctaacgttgtatggacgttgtgaatgctagaaaaacgttg aaacaacgttgtgtgccagctgggtgctCGCTTAAAATTATATCGCTAAA AACGTTTATACTCGAGCCATCGAGTAAACCTGAGaaaccttatcggccct ttttacaccacCCCTTATTGGTGTTATATTTTCGTCGCTAGCGTAATGAG GGCCAGCGTAACGGATCGAAATTAAATTAGGGCTGGGCTAAAAATGAGCT TTGGCGTGAGGGCCGTTGTAAAAAGAGCCGATAAAAAGCACATTAAAACT CTATTTCGGTACGGTCTGAGCTCCAAAACTTCTATGAACATCTCTTTTTC TCAAGATTTGAAATATATGATGATGCTACCTTTCTTTTCAGCATGCTCTG ACAAGAGTTCATATTGTCGGTTCTTCCCCCGTGCACAATGCTCGACGAAT GCTATTGTTCGTATGCAATGTCCAAAATACTGTGGAACGTGCGGTGGCAG TGGAAGTGGTAGCAGCGGCTGTGAGTGTGTTCTTCTCTGAATATTTTCCC CCTCCTGTATTGTAGTTTTGAGATTGTTAGGTCAACCTCCCCATAAGAAC CCTGGAAAGCTCGAGGTCCttgacttttttctaaattcctaacttttttc CGATAGGCTGAATTTTCCGAGTGAATTTCTGTATCGTTATTAGGATCATA TTGCTCGAGTAAAAAAGGGCAACTTTCCGTCTGGGATCTAAAGTGGTCAG GGGCTATGGCCTTCATCACCCAGTATGGTTGAAGGTTCATTTTCGATTTT ATTTaatgcataatttcaatttgttGTCGTATTAGCATGTCGAGATCTCT CCTCAAATTGTTACATGTTCCACTCTCAGTGTAGCAACTCTTACGTCAGA CAAAGATGCCCAAAGACCTGCAACGCCTGCAGTGGTGGCGGAAGTGGCGG TAGTGGCGGTGTTCCAAGTAAGTGTTTAGACTTTCACCAAAGTCTGTAAA AACCTCGGCCttgaagccttttgtttctttccattggaaaacttgaactt gcgtttgTTTTGCTCGTTTGATCAAATCTCGAACCAATGCCAAGAGGAGA ACTTGAAAActtgatcaaaaactgagcacaAAGGGCACTATAAGGGTCGA AATGAACAAAtgtaaaaaatattacactctaagggtgtaaaatttggaaa atgttgCCATATTTCGCCTGAAaacggtcgtttttgaatcgagtgccccc ccccaggCCATGGAAATGTCGATAAAAAAATCTGACTTCTTCGCCTAAAC TGGAAAGAGTAGTAATACCAATAACAAAGGATATGTTGGGGCTCTCCATA AAGCACACAAGTCAACTTGATTCATAAAACAACCACATCCAGATCcttga aaaatattctccaTTCTACCTTTGAAGGTTGCGCTGGCAAAGGCACTGGG TTACCCTCAGGTAAGAATTACATTAAAATTCCAAGAAACTCGACCTAAAA ATGGAAAGATAAAATGGACTCTTTTTGTCTTGGATATATATATCtaagaa tttcttttcttttgaagcATTTTATCAAGTCTAGCGAGTTGAAATAAAAC AAGTCCCTTACCTAATTTAAATCAATTAACTTGCAAATAAGTTCACATAC TTTCGAAGAAGATGAAATAACTGATAACTTCTGTCTATGTATATTTCTAC TCAAATTTAGGTGCACAATGCGGTCAAGTCAAAGTCAGTTCATCAAGAGT CATTGCTGGAGAGAACGCAAAAGCTGGAGCATGGCCATGGCAAATTGCCA TGACAATGAAAGATGGGCGTTTTTTCTGTGGAGGATCTTTGGTCAACGCC AAATGGGTGGTCACTGCATCTCATTGCATCGATAAACAACAAGCTTCCAA TATCCAAATCGTCTTAGGTACACGATAGTTATTTTCTAAGTAATCTAACA ACCTGTGAATAGCTTCTTCGCCCTTTTTAAAGTCTAACATCACGTGACTA TGGAGCGCCAAAAGAACAATAATAAATTCACTTATCTTTTGGCTATCTTT ACAACAGAGTCCCACGGGATATATAGTCGTAACCTTTTAATAATGTCGAG GTCGAGCTTTACAGAGAAAATCCGTGAGTAGTTGTTTAGAAATGTTGAGT TTTTATCTGACGCAATATACCACTAAATCTCAAGATACaaaatgaaaagg tattttgGAAGAACACGTGCTTTCTACAGGAAAATAGTACAAGCCAAAAC TCTCATCCTTAAAAGGCAATCTTTTCGTTACAGGCGGTCACGATTTAAAC CATCCATCTGGTAGCGAACAAACTCGAAATGTGAAACGCCTTATTATGCA TCCTTCATACGGACGCTTGAACAATGATATTGCATTGATCGAACTCGACC GTCCAGTAATGTTCACTGATCGTATACAGCCTGTGTGTTTGCCAGAGCCT ACAGAACAACCAGCTGTGGGAAGCAAATGCTACTTGACTGGTAAGAATCT CTTTCCATCAAACCTTTCGTCAAAGATTATAACATCCCTGTCTAGCTAAC ATGCCGgaaaatttgttaatttttctaatttaaggcatggcaataaataa ttattttggaagCTACGCGTGAAAAAATAGAGAAGAATTTAGTTACGATT CAGGCATGTAAAATACGCGTTAATGATTAAGGAAATTCAAGTCTAAAATT TAAATCTAAGTTTTAATGTCAAAAGCTTGATATGCGCTATAATTTAATAA TGCAAAACTTAGCCCACGTCTTAATATAGTAAGATTAATTGGGTTTTTTT GGAAGAGTAcgctttaaattaaaaaaagttacaatatCTTGTATGATTTA tctatttttaaggttttgtattgctttatgtttttatttctgTTCTGTCA CGCTTTTTTCACATAAAATTGAGGAATGATAGAatttgttggacctacct ggaggtcctataaattaacctttgtccgtctgttaccctgcttttctcga gattggctcattaattTGTTCCgcatttttgcataaagatgtgtattagc actgcccaaaaaaaaaaatccaggccaaaaatgccggaaatatgccggga aaaccggctttttggcattttctagagatttcatcatttgtttttttctg aattttcgaACTAAGATGTAAATCagcaatgcctaaaatatgacctagtc cgattttcgatggaaatttttttctggccgaaaatgacagaaatatgccg gaaatcaccgtttttgcagatttcatTGGATCTTTATaattcatattttt gtttttcaaaaaaaagcatTATAATAAAATGCCCACGATTCAgtatggtt caattttcaatgaaactgattttggtagcCGGAACAGCCGAAGATCACTA GGAAACCGTTCGCTCGTCCGTTCTTTTTTCACGATCTTTTCCATCATCGC TTTAAACTACAGTCGACTTTCCATAACTTGAACCTCCTCAACTCAATTAT CTCCATAAACTCGAAAGATTTTTTCGGTCTCTTGAGAAGATTCTTAGACT ATTCTGCCTCTCTATATCTCGAATTTCCATAACTGGAACAATTACTGATT ATCCCCTGGGCGTTCCAGCACTCGACTATATTACACTTCCCTACTTTAtt ttatttcgtattttcaacactttctctccttgagNNNNNNNNNNNNNNNN NNccaaaaatgctggaaatatgccgggaaaaccggctttttggcattttc tagagatttcatcatttgtttttttctgaattttcgaACTAAGATGTAAA TCagcaatgcctaaaatatgacctagtccgattttcgatggaaatttttt tctggccgaaaatgacagaaatatgccggaaatcaccgtttttgcagatt tcatTGGATCTTTATaattcatatttttgtttttcaaaaaaaagcatTAT AATAAAATGCCCACGATTCAgtatggttcaattttcaatgaaactgattt tggtagcCGGAACAGCCGAAGATCACTAGGAAACCGTTCGCTCGTCCGTT CTTTTTTCACGATCTTTTCCATCATCGCTTTAAACTACAGTCGGCTTCCC ATAACTTGAACCTCCTCAACTCAATTATCTCCATAAACTCGAAAGATTTT TTCGGTCTCTTGAGAAGATTCTTAGACTATTCTGCCTCTCTATATCTCGA ATTTCCATAACTGGAACAATTACTGATTATCCCCTGGGCGTTCCAGCACT CGACTATATTACACTTCCCTACTTTAttttatttcgtattttcaacactt tctctccttgaggtcagatctctgatcttcaccatatatattcATCAGGT TTGTCCAATCAGCGTTCcggcttgttttttttttttggtttagtCGATTG ATTGTAcattattttatagatttttttttctggttttGACAAGTTTTTGG TTTGTtgggtttgaaaatttacacacGTGTATGAAACACTCAAAAGGAAA ACTCGTTGTTATCGAAACAATTTTTTACCTACTATGGTCAGAGCCATTTT ACAGAATGAGTCgtcttattttttgaataaatacatATTCTTGATCTAAA CTGATAAATAATTTTCAGGGTTAACGAGAAGGAGAGATGACTGAGTGGTC TGTGGTATCAGACCTCAACCATTTTACCGAAATATCATGGTTATTTGAAA AGAGAATTTGATAGATTCAGCATCGccttttataaagtttttaaaatagt TGTATCTATTTCGAGTAGAACTTTCTTGGAGTGTTATTGTTTGAGATGCC TTGTAAACTTTTTATAAGcttttgaggctgaaatttgtaAAAAGATCTTG AGAAATTATgtactgaaaatgaaatcaatGAGACAGGGGGGTATACAACg aatagaaattgaaaataatctaaggctgaaaattaaattttgctaaGTAT GACGAGCCTCAGTTTTAATTTCCCGTATGCTTCTAAACCTTGTGGCTTGT TTCTATGGCGGTGGTTAAGCAGAAAATGGCACTCTCATCGgaggtttttt attttttggcgagCCTTCTTCATAAGTTTTCATCTAGGAGAAAATGCAAA CGAGAGAAATTTTGAACTATGAAAATTCATTGGAAGCAGTCCCAAGCCat ggtttttcaaaatttattttttgatagcAGCACCTGAAAAGTCTTCAAGT AGTGCCCATTCTCCGAGGGAACTGCTGCGGAGGACACTGACCACTCCCAT TACACCTTCACAAAACCATGACAAAATGTTTTAACTTTATAAAAGATTTA AACAAGACTAGTAATGATGCTGATAAGActcattcatttttatttaacaa CAGGCTGGGGAAAGATTCAACATCCTGGAAGCTCACATCCAATCCTTCAA CAAGTTGGCTTAACTATACAAGAAAATTCTCAATGTAACAGATTGAACTC AAAATACGTCCCCATCTCACAACAAATGGTATGCGCGGCCAACCCAGGCA CACGACAAATGGGTTGTCATGGTGACAGCGGTGGCCCACTTGTCTGTCAA CAGCCAGATGGTAGCTTCAAACTTCATGGGGCTGTCAGTTGGGGCTCACC AACATGTACGGCTAGTGACGCTTGGACTGTTTTTGCTCGTGTCTCCGTTT TCCGTAATTGGTTGAACTGCTATATCAACAACTAGATTTGTTAAATTAAC GANGAATGCAAACGAGAGAAATTTTGAACTATGAAAATTCATTAGAAGCA GTCCCAAGCCatggtttttcaaaatttattttttaatagcAGCACCTGAA AAGTCTTCAAGTAGTGCCCATTCTCCGAAGGAACTGCTGCGGAGGACACT GACCACTCCCATTACACCTTCACAAAACCATGACAAAATGTTATAAGTTT ATAAGAGCTTTAAACAAGACTAGTAATGATGCTGATAAGActcattcatt tttatttaacaaCAGGTTGGGGAAAGATTCAACATCCAGGAAGCTCACAT CCAATCCTTCAACAAGTTGGCCTAACTATACAAGAAAATTCTCAATGTAA CAGATTGAACTCAAAATACGTCCCCATCTCACAACAAATGGTATGCGCGG CCAACCCAGGCACACGACAAATGGGTTGTCATGGTGACAGCGGTGGCCCA CTTGTCTGTCAACAGCCAGATGGTAGCTTCAAACTTCATGGGGCTGTCAG TTGGGGCTCACCAACATGTACGGCTAGTGACGCTTGGACTGTTTTTGCTC GTGTCTCCGTTTTCCGTAATTGGTTGAACTGCTATATCAACAACTAGATT GGTTAAATTAAcgattatattatttttttagcaaagtTTTCTTTCTCAAC GAACAAAGATCGCAAAATTAGAACATAAAAGACAGAGATAATACATCAAA TTATATCCACTTAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004055TCONS_00004055Clytia hemisphaericatranscript
TCONS_00004056TCONS_00004056Clytia hemisphaericatranscript
TCONS_00004057TCONS_00004057Clytia hemisphaericatranscript
TCONS_00004058TCONS_00004058Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00004057-proteinTCONS_00004057-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000039supercontigsc0000039:635782..642446 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
CMA1chymase preproprotein Homo Sapiens
KLK9kallikrein-9 precursor Homo Sapiens
GZMHgranzyme H isoform 1 precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.55 2.35 1.27 1.03 0.25 0.12 0.62 0.47 1.11 0.7 3.42 1.3 26.52 19.96 1.84 2.16 22.29 21.18 185.12 163.71 88.03 102.88 162.13 206.26 123.35 172.37 6.27 3.66 1.82 1.5