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Sequence
The following sequences are available for this feature:
gene from alignment at sc0000044:609489..615443+ Legend: gene Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_002446 ID=XLOC_002446|Name=XLOC_002446|organism=Clytia hemisphaerica|type=gene|length=5955bp|location=Sequence derived from alignment at sc0000044:609489..615443+ (Clytia hemisphaerica)
ggaaaaaaaagttaaagaacataaaaaaataaacaaaaaaagacagaaaa
aaGTAAACTGTTATTGCAAAACAGAacaattatgatttttttgatatgCT
CCATCAAATTGGTGGTGATACTAATGTTCCTTAGATTTTCAACCGGTGAG
TCTcctttgttttaaaaatatattgttcTAGTGAGTCTATCGATCTATCG
ATTTTCTCTAAATAAATCTTCAgctttaaagaaaaagaaagtggaCTAGT
CTATTTTAGCCTGTACCAACCCGCTCAAGGGCATTTTTTatattgtgaaa
aaaattgccgttatCTTTTCGGCTAGCGAAGAAGAGTTTGATACAGTCTA
AGCCTATTTATACGTTCCCAAATTTTACTGCGCATTTCTTCTTACCGATC
CAAATTTAGAttctaaacaaaaattattggaTATTCGATTACTTTTGCTC
ATTTTCTTCCCTTTGTAGTATCCAAGGATGCAATCTTACTTCTCCTTTTC
TAGCGTCCAAGGTTAATTCTGAGATGAAGTTGGTGGATTATATCCTTGCG
AATTACAGTAAACAAGCCCGACCTGTGATCAATCCACGACATAGTATAAA
TGTGACTTTTGGCATTGAAATCGTGCATCTTATCAAAGTTGTAAGTATAA
AAACTGGGATAGTTCCAGTGACTGGTTTGTTCATACGTTATTATATAAAG
GGTAATTGTTTGTTAActtcgtttatgagagtttcttgttgacagttACT
TTTAATATTATTGAATATCGGAGCGTAtggaatagtagaacgtcattTAT
GAGTGTTTCTTTTTGACAGTAACTTTTAATATTATTGAATAtcggagcgt
atcgaatagtaaaacgtcgtttatgagagttgcTTTTTGACGGTAACTTT
CAATATTATAGAATAATGGGAGCGTATGGAATAGTAGAATgtcaaattaa
ttaattaacgCGATAGACTTTTTTCGTTAAAGAATGAGTAGTTGCCTAGA
ACTGGAACGCGTGGAGAAAATCTACGCTATGTTTTAACGGTTTCGTGTTT
ATTATACAACCGTTACAGTTTTGTAGAGGTTTCACACTACCTTATGGCGT
CTacgaatttttgaattttttgtaaattttcaaaattctttgaaaatatt
taaacaaGTTCAATGTTGCAACCTGATCCTGATCCCAAGCTCTTTGTTTA
AATATTATAGCgttcttttatgttttcttattgacaaaaactttttattt
attattgtaGGATGATAGAAATCAAATGTTGACCACAAAGATATGGGTTC
GACAGGTTGGTACAACCCAACCTcgtgcccgtgtatcccaggctttattt
acactaGTGACGGACGCCATTATCTAATTCTAGCGTCATATcgttaaagc
ataaaaaagctgtgataatgcgcagggaatGAGGTTGGGTACAACCCTAC
AGATCTAATACAttaaaggaaaaaattatagcggaaatttatttttgcgg
ATGGTAATTTACCTAAAATCCACCGAatccgccaatttttttctaccaaa
atttccttcttttaaaattttaaggtGAAACTTTGAATTGCACTGAATGT
TGGAAGTTTAACATGAAAGTTGTAAAAACGGTACACTCATAGGAACTAAA
ATGTTTGCTTGAACAAGgctgaagattcctctctagcacTTTGGTGTTTA
AACTCAATAGTGGGCGGCTCTGGTACAAGAATAATTTTTAACAGCTAATA
GTTCCAAtagcaatttttcaaaaaagtatttcttgCAACTGAGATTACAG
TTCAATGTGATTTCCTAAGGGTTGGGGGACGTACGAGGGTACTGggcacc
gaaataccgacagttTTTCACAAAATCACCGCAATACCGATACATTTTTT
ACGAAATACCGACACCGacactttttcatgtttttcaaaattctaatatG
AGATAAAAGCATACGAGGGATTTCTGAGATAACAAGCTCTTGTTTTAGCA
CCGGTTTTCCGACGAAAATTACCGTATCACCAATTGAAAATGTAACATTT
TCCGTTATCACCGAAAAGCATCtcaaacaccgaaataccgacacatTTTT
TGTTGATCACCAAAATACCGACGCAAAAAAGGTCAATACTGACACACCGA
CAAACTGGTACGCCCATGAACTTTTTCGACTTAATTTCTCATTGGATCAG
TGTCATAGAGGTACGACTTAGACAAATAAATGTTTGTAAAAATGTGTCCT
ACAcaggaaatttcatttttagcaaTGGTTGAATGAACTTCTGAAGTGGG
ATTCATCCAAATGGTCAGGGACAACTGAAGTACAAATTGATGGACAACTT
GTTTGGGTACCAGACATTGTCCTTTACAATAAGTAAGTGAGATATTCTTG
AAGAAAGCTCGTTCCTCTAGAGAGCTACAATTCATTGCATTGTGCGAATT
TCCGATTAGTGGAaatattttggattttcaaCATGGAAGTAAAATATAAG
GCGGACTATAAACTTATTATTAATTAAACCTTCATTCTTTACTGCTCAAC
TGCGCTGGGAATTTTTTACCAAATGTTAAAGATGGCACTCTAGATATGAA
TCTCAAAAAAATTCTCGATTTGCGTAAAGTTGGCCCTCTCAGCAATTAGC
TTAAATGCGTGAATATGGGTCTGCGTGAATGcgctaaaatggaaaaaaaa
aacgtgtgaaTTGGTGAATTTTCTATATTTTGTGTTTGACtacgtgaatt
tttctctttcttccATCGATTATGTGCAAATTTCCCGTTTTTTACGAAAA
GAATTTccgatattttgaaaattgggtttgcgtgaaACTCGGGAAAAATg
cgtgaattttgaaaaaattgcgtCATTGCGTGTGTATTTAGGATCCTCTG
GGGGAGTGGCTCGTAAAGGATCACCtggaacgtttgcttccataatggtg
gaaattacTTTGCTTAACAAAACGAACTTGAAATCTTTATTATTACATCT
TAATAAATTCCTGTACTTCTTCTTTAAGTGCGGACAGTGAATTCAGTGGT
GGTGTAGAGAAATACAAAACTCGCATCATACAATATAGCGATGGAACATC
TTTTTGGCTGGCACCTGCTACTTTTACAAGCACGTGCAGTATTGATATCA
AGTAGGTCAAGTTATACAGttgacgttctctaattcgatttcaaggggaa
ttgaatTTCCATAGAATAAAGGAGCGTATCGACTGGTAAAGAGTTAGAGA
GTGTTAACTGAATTACCCTTTCCTCCTGGCACAGAGACCCGATGGAGCCT
CCCTCCCCTTAATAGGAGGATGTGCTAAAAAGTCGTCCCAGGTgaaaaaa
taccctgaaattttaCTTTGACTGGATAAGTGCCCTATGATTTCATGTCC
ATTGGAAAATTAATAGAAATTGAAATGAGATCGCGCTCCGAAGCGATTCC
CACAGGCGTCATGATAAGGTTTTTTTAGTAGCGTAGGATACATGTATTAG
TATTTTACGTTTGTTGCACTCGCACTACGCTTAGATAATAGCGaaattat
gtatcggagatattctacggctacggttgcggggctgcccgtacgggtcg
ttgtctactttgctctgttcgggaaaaacaccaaaataccgtataagcaa
agtcgacataatgacgtacgtcaaatatcgaatttgcttttacccgccat
tacttgccttactcgccatttccctcgccactttagccgtagccgtagag
aattccagatacataatctcgctagtAGTTACACCCCTATCTCAGAGTAT
TTTGACTACCATATTTTGGTTTTTCGGTAATAATAggtctttattatttt
tttcactttcagaTATTTTCCATTCGACAAACAAGAATGTCATTTGAAAT
TTGGTTCTTGGACTTTCGATATTGCTGGTATCAATTTACTCAAGGATAAT
CGTCCATTGATTACTGACCAGTATTCTGCGTCCAGTGAATGGGATTTAAT
CAAAGCTGAGAAACTCCGACATGTTGTCAAATACCAGTGTTGCCCAGAGC
CTTATGTTGATATAACATTCAATTTAGTGTTATTACGGAAACCATTATAT
TTCGTGTTCAACGTTATAGCACCTTGCTTGGTTTTAGTTATGACtgtatt
ttttggtttttttctaCCCCCTGAAAGTGGAGAACGCATATCTTTGACCA
TCACTATTTTGCTTGCTGTTGCCGTGTTTCTCCAGTTGATATCCGACGCA
TTACCTCGCAACTCGAATAGTGTTCCAATGCTAGCCGTCTTCTATATGGC
GATTATGGCTGAAAGTGCATTTAGCCTGATAACTACGTGTATTGTCTTGG
TTATTCATTACCGGTCTAGTGAAAGAGGTGCAGCACCTATGCCGAAGTGG
GTACGCAGTTTCTTTCTTGGTACATGTGCAAAATTTTTCGGTATCCATGG
TTACTATGATGAACTTGAGACAATGCAGACAGAAACCAGGTTAGGCGAGG
ATGCGAATAAAAACCACTCCTCCGCTTATGATAATGGTTTCTACATGTCA
GATGAATACAATGACCTTCAGAAAAGCAATCCAAATTCAACCCTTCAGAC
AAATAATTTTAGCGGGACGCTTGATGTGATTTTAAAGGAAattcaaatta
taacaaaagGAATGTTAAGCAGTCATCAGAAAAGTGAACTGCAAGAAGAC
TGGAGGCTACTCGCTCGAGTACTGGATCGTTTGTTTTTCTGGTTGTTCTT
GGTTACAGTGGTCTCCTCGGCTCTCGGCATTTTGGTACCTGTTTATCTTA
TACATCATGGATAAAAGTACAAAACTACTTTCCGATTTTTTTTCACGAAT
ATCCTTATGGAGTACGTTGTTATAAGAAAAAGCATGTAGAGGCGAAGTTC
GGACCCCTTGGAGAGTGCAGCAATACACCCCTCAAACTCGAACCAACCAG
CTGTTGATTTGCTCGAGGAAATGGCTGTGGGGAAACATGATGGACAAGAA
GTATGGAGACAGTAAAATGTACAATGAACTGGATAGAATCTTCTTTCAGA
TTAACGTCTTAAAGTTTGATTTGTAACTTTGTAACTAGCGCCCCATTATG
AAAGCAGACAAGAAAAACACGAGAAAAGACTAGGCCAAGACTACAGACTA
AGAGTCCTGCAACCGACAAAAGTAAacaattagaaaacgaaagtgaaggT
AGTCGTCAAATATTGACACCAGCatccatcagtaaaatccaaaagTGGCT
CTGTCTACGACCCCCGTCCCActtgaaaatttggccaaaatttcgtcccc
gttggaaagatatctcCCAACAAGTTCAGTCCCACTGACAAATGACTTCG
ATTTCATCCCTATTCGAAATCCAATGTAAAAGAAGATGTTGTACACCGAA
ACCATCCTACAGAATTTCGTTAGCTAGGAACAGTAGAATTTCTAACCACA
TTtagatttcgatagaaatattccatggggctgtgagacagggttgtaac
ATTAACAGTCAAtagtagattttatttttgcattGCATAATTTCTTTTTA
ACCATCATCATTAATTTTTCTCCGCTAGCAGAGATAATATATCATCACTG
TACAAAACACTTGCAAAGGTTCCAaagtcaaaaagattttagaagaaaaa
aatctaaaaattgtaTGACAGTGTAAATTATACCTtaataaaaagtaatt
tttacACAATTTTAGTATGAAATAATTATccattaaataaaataaaatat
atagtcGTTATTTGCATTATAATGTATATTGTAATGTatatataataaat
aataaaattttaatatcttaaaaggGCGTCATTTTTGGGGGACCAAGGGT
CTTTCTTCTTTCATCACGTCGTTTGGATCTTTTGGAAGTTATGGATTTTT
CTTTCGTCTTTGTACCATTTTCCAAGTTTTCCCTTCTGTGGGTAATCGTT
AATAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
The following polypeptide feature(s) derives from this gene:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000044 | supercontig | sc0000044:609489..615443 + |
Orthologs
The following orthologs are found for this feature:
| Ortholog Name | Description | Organism |
|---|
| CHRNE | acetylcholine receptor subunit epsilon precursor | Homo Sapiens |
| CHRNA6 | neuronal acetylcholine receptor subunit alpha-6 isoform 1 precursor | Homo Sapiens |
| CHRNA1 | acetylcholine receptor subunit alpha isoform a precursor | Homo Sapiens |
| CHRNA3 | neuronal acetylcholine receptor subunit alpha-3 isoform 1 precursor | Homo Sapiens |
| CHRNA9 | neuronal acetylcholine receptor subunit alpha-9 precursor | Homo Sapiens |
| CHRNA10 | neuronal acetylcholine receptor subunit alpha-10 isoform a precursor | Homo Sapiens |
| CHRNB3 | neuronal acetylcholine receptor subunit beta-3 precursor | Homo Sapiens |
| CHRNB2 | neuronal acetylcholine receptor subunit beta-2 precursor | Homo Sapiens |
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