XLOC_002457 (gene) - C. hemisphaerica

Overview
NameXLOC_002457
Unique NameXLOC_002457
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000044:137756..141284-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002457 ID=XLOC_002457|Name=XLOC_002457|organism=Clytia hemisphaerica|type=gene|length=3529bp|location=Sequence derived from alignment at sc0000044:137756..141284- (Clytia hemisphaerica)
CATCTGCCACTTGCTGGTAACTCCTAAACACAGCTGATCACAGCAGCCAT
ATATGCAAGTAGGTTTGCTTTTACTTTCGCATAAACAACAGACCACATTT
CAGTACTTAGCTCCAGTTTAAACAGCCGGCTTTCTTCCCTGTCTAGTTTA
ATTGTTAAAGTGGGCAGAAAGTTGGCAGTTACATACTTTGCTTGAAAAAG
ATTGAAAGAAGTAATTGCATTGACTTTAGACAGCCAACTTTCTGCCACTT
TAATCNGTGGGCAGAAAGTTGGCTGTTACATACTTTGCTTGAAAAAGATT
GAAAGAAGTAATTGCATTGACTTTAGACAGCCAACTTTCTGCCACTTTAA
TCACAATTATTATACATGATATGATCAAATGGAAGTGAGTTTATTTGATT
TACCTTGTGGACATTTACACGCTGATTTCTTGGTTGAATTTATAGTAAAA
CGTTGCATTCCTTATAATTTTTATTATCTCAATGTGTAGATCCACAGCTT
TTTACCGTAAAATGTAACCAAAAGTGACAGTGAATTTTTCAATTTCCCCC
TGTAAATGAGTACTTTACTCAAACTTTACTATAAATGTCATCTCCGAAAA
GGGCCAGAATGCCAGAATTCGCGCTTCTCGTAAATACGCGACTTCTCGTA
AACTTAAGCTCTTCCGTGCAGTGAATCTCCATATTTTGGGTAGGTGGGCA
GGCTATCACACAATGATGACGTATATTTATTTGAACTCTTTCTTGCATAG
GTATCCTATATGTATCAAATTGTTATAAGATGAGGTAACATGTTTCGTAA
TATAATCTATTTGATCAATATGGATGAAATATGAAATTGACAGTGAAAGA
AAATTTGGTGTAAGTAAAGGATTAAGATAACTCCTCCCATGCTCCTCTCG
CTTNTGACAGTGAAAGAAAATTTGGTGTAAGTAAAGGATTAAGATAACTC
CTCCCATTCTCCTCTCGCTTAATTAATCGACTTGTGAGAAAGATACTCCA
GTAACTTTGTTTGTATCAGTTTGTATAGTTGTTGTGGTAAACAGTCTTGC
GAGCATGGACAAGTTTGATCTGAGTGGATTTTATGTAAAGAAAGTATTAT
TAAACATGTAAGAAGTTTGAGTGGCTCTAAGAGGTTTGTAAAGATGGTGT
AGTCTTACTACCAGTGGGTTTGTTGCCAGGATATCCAAACTAGTGGTTTT
TGTAGGCGACTGCGATTCAGATCAATGTTTGTGTGAGTGAGTTGCGTCGA
TTGAAGAAGTAAAGGGAATTAAAGTTGACCCTCTCTAATTCGATTTCAAG
GCCTTTTTCAAGTGTAATTGGATTTTTATCGAATAAGGGGGTTGTATCGA
ATAGTAGAGTGTCGTTTTTGAGAGTTTCTTGTTGATGGTGACTTTTAATA
TTATTGAACAATAGAGCGTATCTGATTAGAGACTTGAATGTTGATTGCGG
TACGGTGGTTCAATAGTTCCTGGCCGGATTGTAGAGATTTTTTAGTTTTA
TTTTTGATTTTTTTTCTGCATCATCAAATCGATGTTATCGACCTCAGTGT
GTTTCAAACTATCTAGTGCATCCACTCAAGTCATTGCAGGATCAGCATTG
TTTTTAAATTGTTCTCATATTTTGACGATTTGTAGCCTAATTGATTTTAT
AAAATGATTATTATAAAAAAAGGTACGGAATTCTTTACGGCAGAAATATT
CCTCCTTTGAGTTTGTCCCTATTTTCTGTAATAAGAAACAAAAGAAAATT
GGTCAGGAAAAAGATGCTAGTCTATTATTTACAGATACATAACTTTTGAA
CACTACTTTATGAACTAAGCTGAGAAATATCTTTTACGTTTCGTATTACT
CTTAGGTGCCTAGTAGTTAATTTTTGAAAATATTTTTAGCAGTCAAAAGA
AGAGTCCATTTTTTGCTGGTTTTAGTCTATGATTACCTTATTTTTNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGAGGCAGGGGTATTTAGAG
GTACATTTCCACCCCTACCGTTTATTAACATTTCGACACACATCCAGGCC
AGGTAGGCACCCCAGAGTAACGACTTTGAATTCTTATTTCCTTGACCAAT
ACAATGATTCTTTGATTAACTTGAACAAAATACAAGAGAAAAACGTCTAA
ACTTCTTAACACTTCATCTATATCTTGGGTCATTTTAATACTTTGTGAAA
TATTTTCTTTCTCGCCCCACGGAAATGACCATATTTCTAAATCTTATGAC
ATTATTTCACACAGTTCTAAGAGTTTTTGTATGTAGAGATTATGAGCTTT
GTGAGAGTCGCGTCATGTGTGAACGTGAGTTGACAACATCTCTCTCCGTA
TAAAAAACACTTTTTAAAATACTTGCTTGCTTCTGAGGTTTTATGTAAGT
GATGTTCAAGGTTCGGTCTTAACTACAAATGAATTACAACGGCTGGTTGG
TTTAACGAGTTATAAATAATTTGAATTTCGGGCTTAAATGGTTCGCTTTC
TTTCCAGCTTAAAATAACGATATCGAACACAAGAAAAAACTCCAAGAATC
AACTATGGAGACGATACCAGAAGGATTATTGGGACCTCGAAAGAAATCAA
ATTCGTTCAATAATCGCTTCACTGAGCAAACACGATCTTTGACACGTTTA
AACCCTGAAAGCATATTAAAGAAATCACCACTTCAGCGATCACAATCTAC
CGCCAGTATAGAGAACGTTCTTCACAACGCTGTCTTAAGGGAAGACCATG
AGGCGGTAGTCCAAATTCTGAACAATAATTTTCTTGATATAAACGCTTTA
TCAATTGATGGTTTTACCTCACTTCACCAAGCTTGTATAGTGGGTAATGA
AGAGACAGTTAAGTTACTAATCGAGGCAGGGGCAGATATAACTTTGAGGA
CACGACGCAAGAAACATGAATCACCTTTAAAGTTAGCTTACCTGAACGGC
AACTTCGAAGTCGCGGAATATTTGTTATCCCTTGGTGCACATGATGCAGA
AATTAAAAACGGAATGTCCAAAAAATGTTTCGGAAGAGCAAACACTTTGG
CTTCGTAAAATGGTTTTGAGAATCGTGTTTTTTGGGGAAGACTGCTAAAT
AGCCGCTGAACTTTTTCGAAAAAATTGGTCCAATGGCGTTGAGTATCAAT
GCATGTTTCTCTGCATCCTTGAAAACAGTGGTATAGCCTGGAACTGAGAC
CACGATTCCTCTTCCTTTTTAGAAGTCAAATTTGTTTCAGGGTCTTAGAA
GTTGTAAATAGTCAGTAAGTTTAATTTTCTTGAATATTTTGTAACATATT
TTTTGTGAGGTTCCAATATAAGGAAACTATGATTTAAAAGGTAAATTTTA
AATAGAGCCATCTGATAAAGACTTATTACAGAAACCTATTAACCCTTAAA
GCTTGATGAAAGTGTATTCGAATTTACCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004396TCONS_00004396Clytia hemisphaericatranscript
TCONS_00004395TCONS_00004395Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00004395-proteinTCONS_00004395-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000044supercontigsc0000044:137756..141284 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.86	1.31	0.65	0.42	0.06	0.15	5.29	5.47	3.26	3.24	1.99	3.69	4.45	4.06	0.34	0.45	11.37	13.17	12.2	12.92	23.81	21.75	6.3	6.43	7.16	8.25	1.64	0.84	1.59	2.22