XLOC_002561 (gene) - C. hemisphaerica

Overview
NameXLOC_002561
Unique NameXLOC_002561
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000045:454644..459728-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002561 ID=XLOC_002561|Name=XLOC_002561|organism=Clytia hemisphaerica|type=gene|length=5085bp|location=Sequence derived from alignment at sc0000045:454644..459728- (Clytia hemisphaerica)
GAAAAACTGAAATCATGGGGCAAAGCTCCGTTTAACTTTATGAGAGTACC TGAGCGGAAAGCTTTCTAGCATGAAAGTAATAAAGTGTGCTGTGACGATG TTTTAATCAACAATTTTGTTTCAATAAATCGCAGTGCGAGGCAGGAAAGG GCAGCAAAAAATCAACTCACGTCCTTTTAAATGTTAAAAAGACCAAGCAA AATATTATTACTTCTCATAGTAAAAATTTGCTTTTCACATCAAAATATTT AAAGGGTTATCGAAGCAAAAGCAAAAGGTGACAAGTATCTCTGGTATAAA TACGTTGCTTTCAAAGTACTTTGTAACTAAGGTTTTAAAAGCTGTGCTGT AAGTTTTGAAAAGGATTTCTTTGCTCCTGAGTAAAAGCTTTTTGAAATTT CTACTTTTAATTGGATTGTCTGATTATTTTCATCCAACTTTCATCAAAAT GGTAAGTTTGTTTTCACTTTCATTAGTCTCAATTTTTCACCCTGAACGTC GGTTTTTTGTCATGTGCAAGACTAACTACTAACTTAACAAGAAATCGTTA ATTATGAAACGGACAGTCCTGATTACACATGATTCATTGCAATTATGTTT ATGTGATGGAGTCTAATGCCCAGCCCCTTTTTTATTCGAACAAAGAATCG GAGCCTCGTCAAAATGGCCNGTCCTAATAAAGTCCAGGGGTTGGAAAATT TTCGAAAAATTAACAAGCGGGGGGGGGCGTTTATTTGGAACCTAAGAGTA GGAATTTTCTTTTATTTTGCTAAATTGACAATTGTTTTTATTCTTCCAGC GGGAAGTAGTATCAATTCATATCGGACAAGCTGGTTGCCAAATAGGGAAC TCGTGTTGGGAATTGTATTGTTTGGAACACGGGATTTCCCCTGATGGATT GGTTCCTGATGGTAATGAAATCAATGGTGCCTGCAAATCCTTCTTCTCGG AAACAGGAGGCGGGAAATTCGTTCCCAGAGCTGTCTTTGCTGACTTGGAG CCCACTGTTATTGGTAAGAATTGCTGATCAAAATTATTGGCAATGAATAG TGCTTCGTCATGATTATTACTTTTCTCATTTGACCGAAATTCAATCCCAC AATCCTTTTCGTCTTAATTCAAAAGTCGTGAAAGTTATTACTTGTTCTTT GTAATTGAGTGTAATTTGCGTGCAAGCGTAATAAACGCAAAGGCTGATGG GATTGAATTTCAGTCAAACTTAAAAATCAATGTCTATTTTTAGATTCGCG ACGGTATGCTATTAATCAATACTATTCTCGTCTTGTATGTTAAACTTTAC AATCCTCAATCTGTCATCTCAATCGATTTCGACGACGTAGTTTTTCTCGG AAGACTGCTTTTTGCTAATGCTCTACTTTTTGAAATAGCATATCCGCAAC ATGCCCTAATAGTTCATCGATCGGCACACAAATAATTTTTGAACATTATT TAAGATTCTCTTTCATAAATGATTCTCTCATTCTAGACGAGACGCGAACG GGCAAGCACAAAGATCTCTTTCATCCTGACCAATTGATCAATGGAAAAGA GGATGCAGCAAACAATTNCATTTTTGAACATTATTTAAGATTCTCTTTCA TAAATGATTTTCTCATTCTAGACGAGACGCGAACGGGCAAGCACAAAGAT CTCTTTCATCCTGACCAATTGATCAATGGAAAAGAGGATGCAGCAAACAA TTATGCTCGTGGACATTACACCGTTGGTATGTATTATTTCCTAACCGATT CAGATTTGCAATATTTCATGCCGTAACAAATAGTCAAACAAACGTAAGGA GTTCAAATCCCATTCCAAAGTCACATATTTAAAGTCCTTGATAATCAACT CTTCCCTCCAGAACCTTCCTGAAGAATCTAACCATTTAACGCAACTTGCA TATTTTTGAATGACCCCTGTATCAGACCAAATCACTTCAGAAAAAAATGC TGACTCTAACTTTCCATCATTGCAATAGGGCGTGAGATTATTGACGAAGT GTTGGAAGCCATCCGAAAGATTACACAAAACTGTTACAGTCTTCAAGGAT TCATTGTTTACCATTCCCTTGGAGGAGGAACCGGCTCCGGACTCACATCC CTCCTTGCCGAAAGAATTTCTGCAGAACATGGCAAGAAATGCAAACTGGC TTTCACCGTTCATCCGGCACCTCAGGTCTCAACTGCCGTCGTAGAACCAT ACAATACAGTCTTGACAAGTCATACTGGTTTGGAGCATCAAGATTGTGCT TTTATGGTTGACAACGAGGCTATCTTCGAATTATGCCGGACAAACCTTAA TATCGAACGTCCGACATATGTTAATTTGAACCGTTTAATTGGACAGGTGG TTTCAAGTATTACAGCCTCTCTTAGATTCGAAGGTTCCTTGAATGTTGAT CTGAATGAATTCCAAACTAACTTGGTACCATACCCAAGAATTCATTTTCC GGTACCGGCATTTGCACCTGTCGTTTCCGTAGAAAAATCCCACCATGAAA AACACTCGGTAACCGAACTTACTAATGCTTGTTTCGAGTCGAAATCACAA ATGACAAAATTCGACCCACGTGGAGGGAAATACATGGCATGTTGTTTGTT ATACCGTGGAAATGTCCAGCCTAAGGACGTCAATTCTGCAATCTCAACCG TCAAGGCTAAACGTACAATCGAATTTGTCGATTGGTGTCCAACTGGGTTT AAAGTTGGTATCAACCAATTCGCCCCGGCGACCGTACCAAACGGAGACTT GGCAAAGCTTGACAGAGCTGTTTGTATGCTATCAAACACGACTGCTATTG GTGAAGTATGGTCACGTGTTGATCATAAATTCGATTTGATGTACCGCAAA CGTGCTTTTGTGCATTGGTATGTAGGAGAAGGTAAGTGCTTGTTTCTTTT ATCCCTTACTAGAAATATTGCTTTGTACCCCGAAATAAAATTTATTGATT GCTAATCTCGGCACCCCTTTGCTTTTTGACACCCTCAAATTTGCAGTTAT CAGCCAGAAAGAGTGAAAATATCTAAAGATATACTCACTTATCCTTTTAA ATTCCTTCTTTTCGTCCAATCAAATTCTCTTCTTCTTTAGGTATGGAGGA AGGAGAATTTGCGGAAGCCAGGGAGAATTTGGCAGCCCTGGAAAAAGATT ACGAAGAAGTAGGAATGGATTCTAATGATATGATAGACGATGAGGATGCT GATGAGTATTGAATTTCGGACAGGTGAACAAATTTCGGAAATTTGAAAAT ATTTCGGACAGGTGAACAAAATTTGGACAAGAAAATATCCATCAGACATA TCGATTATTTGGATACTACGTGTTTGATGACTTATATTTAATTAAAGTTT GCTGATTATTTTTGACAGCATTTTTACGAAATTTTTTGACCAAAATTTTA TTTAAATTATATATACAGAATTTAGATTATTAAAATGAAATATAAACTAT AAATAAATGCAATTAGACTTAAAAAAGTAGATTAAAGTGTTTTAGTGCTG ATTTAAATAATTTGATTTATATTATTTACAGTGTGACATCATCGCATAAT AATTAAAGGTCTAAGCTTTTCGTCCAATATACATGAAAATTTCTACAGCA AGCAACGTCCATCCAATGTTCATGACATAACACCAAAATAACGTTTTACG AACGCCGAAACAAGGTTCTTGTACCCCTTTGCAAACCTCACGGTGCATTA AGTTTGAATCAAGCCTACTAATTGGTAATGTTCAGTTAATTCTTGTATCG TTTATAATTACTTTTTATTCTTCACTTTAATGTTTAGCTGGAAGTGAAAG AAGTAAAATTATGACATAATATTCCATTAATATGTGCCTTCCACCATCCG ACACCCAAGCAGAAGAAACATTGCCCAAGTTTGAGTAGTTTCATAGCGGC CCATAGACTTAGGAAATAAATTACTCAAAATAAAAAAAATGGAAAAAATT AGTATAGAAAACGAGTCAAGACGAATTTTTTAGTAATTTCCTGTTGAATT AGAAACACTATATGTGTATGTTAGATTACCAAATCTGAATGCAGTATTAA AACATCAAGAGCTTGGAGAACGCACATGCATGTAAAATTTTACTTTAGAC CTTACCGAAAATCGTTCGTAAGGCTGTCTTTTGGGAATTTCCCCGATATT ATGTAGAATTTTTGTTACGTGACTTTTCCTTCCGTTCATACATAAGGCCT TAAAACACTACGTAAGCTTAGGGAAATTCCCCACCCTTCAAGGTCTTACG TAACATTTTACGTACATGTGAAAAAAGCTTAAGTTGTAAAGTCTGGCTCT AGTTTTTGGGGAAAGTTTAGTCTGGTTACAAATAAAATAGAAGACTCTTA CTTTGGTTGTATACCACTTTCAACCTATCACCTTTCAAATGAGTTGGCAT GAAGATGACGTCATCGNAGTAAAGTCTGGCCCTAGTTTTTGGGGAAAGTT TAGTCTGGTTATAAATAAAATAGAAGACTCTTACTTTGGTTGTATACCAC TTTCAACCTATCACCTTTCAAATGAGTTGGCATGAAGATGACGTCATCGA TGAAGAAGGGCGTGGTTCCACCGAATTTGAAAGTTCCGACAGATGGGGTG GAATAGCTTCCAGAAGTAGAACTGAATTCCTGGTCATTCAGGAAGCAAGA AAAGGCAGGAGTGGAGCCATGGTCAAAAGTGATTCCAATAAAATTCCATT CTGTCCAAAGGCTTTCTTTATATGAATCATATCTGCACTTGTTCCATGCA GAATTTGTCTCGTATCCCAAGGAAATTTCAGAGGGATGAAAAAACATGTA AACTCCATACTGACTTGCCGACAAACCTTGATCAATGACTTTAAATATTC CAGTGGCGTAGTCAGCATCAAGGGGTTTTAACATACGCAACCAAAACGCA AAAGTGAAACCATTGGGACAAGGATGTTGTCTGAAGTTTTAAACAAATGT ATTTGTAAAAAGCAAGAAAAGTCTCAGTTTTCTCAACACTAATTTTGAAA GTGGTATGGAAGATAACGTTCGAATTTGAAAAGACTATTCCTTAAAACAA TCGAATGTTTTCTGCCACTATGGCAGAGGCAGGGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004557TCONS_00004557Clytia hemisphaericatranscript
TCONS_00004556TCONS_00004556Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00004556-proteinTCONS_00004556-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000045supercontigsc0000045:454644..459728 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.07 0.02 0.16 0.03 0 0 0.11 0.17 0.06 0.14 0 0.01 0.7 0.84 0.07 0.13 138.26 173.58 0.99 1.06 426.86 404.36 15.78 21.07 35.35 45.72 0.04 0.1 0 0.04