XLOC_003091 (gene) - C. hemisphaerica

Overview
NameXLOC_003091
Unique NameXLOC_003091
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000053:450730..455154+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003091 ID=XLOC_003091|Name=XLOC_003091|organism=Clytia hemisphaerica|type=gene|length=4425bp|location=Sequence derived from alignment at sc0000053:450730..455154+ (Clytia hemisphaerica)
tcNAAGCTGGAGGTCAATTGAGTGTATTTCAAGATGGGAAGTTAATTCAT
CAATGGACTGGGGCAAGTCATTTCGAAGAATTGGGTTATTCATCAAGTGT
TGGTTATCATGGTCGGTTCATCGCTGTTTCGTCACCCGGTGCAGGTAGGA
TAAAGATACCAATTTTATTGACTTCAATATGGATAAAACATTTACTGCCT
TCCTCACTtagacaaatcagaagctaatCATCTCCGCCGTTCTCAagagt
gcaaatacataaacttgctaatATGTTGGTCGTCTAACATGATGTGATTT
GCTGGAACAAATCCAACACCTATAAAAATGTTCGGGAGTCTTATGAGGAG
GCCAGTTTCTAGGCTCGGTGTTGTAGGTGTTTTCTACGTTTATTGCTGTT
TCGAGGCTATGAAAGTAACCCAAATCTGCGGAAGCCGGTCTGATTTGCTG
GAACAAATCTAATACCTAAAAAAAGGTCCGAGAGTCTTGGGAGAGGGCCA
GTGTCTAGGCTCGGTATTGTAGGTATTATCTATGGTTATGATGTTTAATG
GCGACGAATTGACGATacagagtctgctaaattgcgtgggatgcgtgggt
gcgtgggtcaatatttttgcgtgggtcatttttttgcgtgggtgcgtggg
tcaaaatattttttgcgtgggtcaaattttttgcgtgggtaatttttttt
acgtgggtcaaattttttgcgtgggtcatattttttgcgtgggtcatatt
ttttgcgtgggtcattattttttgcgtgggtcaaaatttttgcgtgggtc
aaaattctctgtaattcgaaaaaatgcctTCCCTTGAAATTCGAACTGGT
CACATCCAAAACGTTGGATGTGTTTTACATAAcacgttttggtttatttt
gtttattttgtatagCTGTACAGCTCCGTATTTTCTGAATATGGTGAATT
TGTTCTCAATAAACGAGGTCGGAAAGAATGTTTCCAACAGGGGAGTGTCT
TTTTATAAGTGGAATTTTCCCTTTTGGGAGATTTCGTCCAAAATTAATAC
TGCGATTACGTTTTGTATATACCTATAAATGGCCAAAAATATGTACACAA
TCAAGCGGCTTTATATTTTTAATTCCGCTGACTGAACATGTCAGCTTTTA
TAGCTTCTTATAGCACGCTTTAATCTTTTGGCTTTCCTTTGAGTGTTAAA
GAACAAATTAAATGgcgacaaaatctgaaaatttttctacgTTATATTCA
TTAGGCGACCGATTACTAAACAGTTTAATCGTTGTCAATTATTTCGTCCA
CCCcacttgtaatttctttgatttaagtacattaaaggccaatttaaaaa
attggacgaAATAAAGACGCTGTNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNaatattgacccacgcaaaaatattgacccacgcac
ccacgcaacccacgcaatttagcagactcgacGATACACGTTTCATTTAC
CTTCTATCTACATTTACAGATGTTAAATCTACGGAAGCCGGCATTCCAGT
CACGCTAACCCAAGCTGGTCTCGTCTCCGTCTATTATTTCCCTGATAAAT
ATATGTCCAAGAAACCTGTTCTTGTTTTCCGAATGCTTGGTGACCGCGCG
TACGGCCGCTTCGGAGAGATTGTTCGCTTGCAAGATGTGACTGGAGATTT
TGGAGACGAATTGATTGTCAGTGCACCACGAAGAACGACTGATGTCACTG
AGGAATTGAACGGAGGTATGTTTGTATGTTTAAATTGCATCAAAATTGCA
TCAGacatttttttaagttaaaaaccAAACAAGCCTTCTGCGAGCTATGT
TTCAGATGTTTCAACTTTAAGAAGCAGCATGGGAAATAGTACACTAGCCA
AAGCTATTTTCAAAgtaattatgattttttttaaataaaagaatatgtTC
AGTATATATCAACATAAAGTTCCACGGGTTTAAATGATGTCGTCGAGAAG
TTATGAATCCTTTAATATCCGGGTATCCAGTGATCCACTTGGTCTTAAGG
GGCAAGACTTAGTTAAACCGTTTGATTTAATAAATTGTACGTCCTCGATA
TTTCTCCGCCATCATTATAGGTGAGGAGGGAGCAGTATTCATTTACAAAT
TACCAGAAGTTGGTGATCAACCAATCACTTTCACCACTGATCAAGCATTC
AAATCATTCATTGGTACTGAGGTAAAGCCTATTTTCTGGTTGTAacactt
ttgattttattttgaaaactacATATACAATGATTATGATCAGAACATAT
TGACATTCCTGGGTATTTTATTTAGCGTAAttgcagaatttaaagttcgg
atGGCGTATTTAAAGAGTCACAAGTTGAAATGTGTATTTCGAGGAGCTGT
ATTAAATTggagttatttatttttttcaatactttACACTATCTAGAAGT
TtagctttatttttgataaatcaAAGACCAAATTAACGATGAAATCAGGA
TTCTAGGCCGACAAATTCTGGGGAAATTTTAGTATCGATGAACATGAATG
GTTTTTTCTCCGGTATTAAATCGACTAAGACTCCTCATACTCATAGACTC
CTACGTCCCAACAgtaaactttgaaaatgtcCGGTTAAAAAAATGTCCGT
GTATACTTTTGATCCCGTGAAATTTCCTATTTTATATTGCTGAATTTGCT
TTCCAATGGTGTATAATAAATTTTTCTACCTACGACCCTTTTTGCATGAA
ATCCTATAGGACCATTTTGTGGTTGTTTTCTCAGATCTTTCCTATTAAAA
GATCAGATCAGAGTTGAATATTTACGAGACGTTTTTAAATATcgtaaatt
ttatgtttttattttcagcacAACGCACGATTGGGAAGTTCAATCCACGT
CATGCGAGGTAACAAATCCATTCGTTTGTTAACTGGTGCAACTACCAGTT
CAAAGTATGGCTTCAAATCTGGATTGCTTCATAATTTCTTACTGCACAAA
TATCAATGAAGATTTCTTGGTTCTTAGAACCCCTTTTCTtctataatttg
ttcttagggaATTAAGCGAGACTAGTACAATGTAAcgagtattttttttc
tttgatttacatATACACTGGGAACTCTTAGTAGAGAAGGAACTCCTAGA
AGCGAGAGAACTCCTTGAAGGGATG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00005425TCONS_00005425Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00005425-proteinTCONS_00005425-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000053supercontigsc0000053:450730..455154 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.32	6.05	3.14	3.27	1.3	0.51	3.64	4.2	18.63	17.67	29.41	10.15	28.32	35.99	72.07	91.39	19.49	29.11	92.52	91.39	17.3	19.69	12.16	10.86	10.41	5.43	2.06	4.67	37.84	41.89