XLOC_003178 (gene) - C. hemisphaerica

Overview
NameXLOC_003178
Unique NameXLOC_003178
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000054:609529..614778+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003178 ID=XLOC_003178|Name=XLOC_003178|organism=Clytia hemisphaerica|type=gene|length=5250bp|location=Sequence derived from alignment at sc0000054:609529..614778+ (Clytia hemisphaerica)
AAACACTAATATCATTTCGAATCTagatttatttacttattttcttTGGG TCAGGTCGTCTGgtcattatttttcattttggtttTACTGGTAGAAGATT CGAAAGCCGTAAAGATGAAGATAAATTTGACCCTCTTTATTTTAGGGTTT CTTGTTTATCAGACTCACCAAGCACCATTGTCAATAGGTAGGTCAATTAC ACATCCCTGTGTCACGGACCAGGTCGGACCCCCACCCCACTCGAAAATTT GACGAAAATCTCGTCCCAGGTGGGACAATTTTAGCCTCATTGGGAGATTG ACTTTATTTaaatccccatttgaaatttaattgaaaaatgaTCCCAGTAG TTTAAGGAAAAGAAACTATACGTTAACATTGTTTTCGGTATGCATAAAAG TATGATTACTTAAGTTTTTGAATAATATCTACTATAAATATGTCTACTAG AAGATTGAAATAATTTCTTAGATTGTTAACCATACTCTCTATGGTTACGT CCAGTCGAATCGAACTTCTCATGAACTATTATGAACTAttaggaattaac caaaattctcaatatattttgaccgagattgttTGACTACGTAAGTAGTG TCATTCTTGAATAATTGTTATATTGTCAGGAACTGATGCCCCATTAACCG AGCCACCCACTGAACCACCAACCGAACCACCCACTGAACCACCAACCGAG CCACCAACCGAGCCCCCAACCGAGCCACCCACTGAGCCACCAACTGAACC ACCCACTGAACCACCAACCGAACCACCAACTGAACCACCCACTGAACCAC CAACCGAGCCACCAACTGAACCACCAACCGAGCCACCCACTGAACCACCA ACTGAACCAGCCACTGAGCCTCCTACAGCAGCCCCAGAAACTGATGCCCC TACAGTAGCCCCAGTAACTGAAGCTCCCACAGCAGCCTCAGAGACCGAAG CACCCACAGCGGCTCCAGAAACTGATGCCCCTACAGTAGCCCCAGTAACT GAAGCTCCCACAGCAGCCTCAGAGACCGAAGCACCCACAGCGGCTCCAGA AACTGATGCCCCTACAGTAGCCCCAGTAACTGAAGCTCCCACAGCAGCCT CAGAGACCGAAGCACCCACAGCGGCTCCAGAAACTGATGCCCCTACAGTA GCCCCAGTAACTGAAGCTCCCACAGCAGCCTCAGAGACCGAAGCACCCAC AGCGGCTCCAGAAACTGATGCCCCTACAGTAGCCCCAGTAACTGAAGCTC CCACAGCAGCCTCAGAGACCGAAGCACCCACAGCGGCTCCAGAAACTGAT GCCCCTACAGTAGCCCCAGTAACTGAAGCTCCCACAGCAGCCTCAGAGAC CGAAGCACCCACAGCGGCTCCAGAAACTGATGCCCCTACAGTAGCCCCAG TAACTGAAGCTCCCACAGCAGCCTCAGAGACCGAAGCACCCACAGCGGCT CCAGAAACTGATGCCCCTACAGTAGCCCCAGTAACTGAAGCTCCCACAGC AGCCTCAGAGACCGAAGCACCCACAGCGGCTCCAGAAACTGATGCCCCTA CAGTAGCCCCAGTAACTGAAGCTCCCACAGCAGCCCCAGAAACTGATGCC CCTACAGCAGCTCCAGAAACCAAAACTCCTAAAGCAGCCCCAGAGACCGA AGCACCCACAGCGGCTCCAGAAACTGATGCCCCTACAGCAGCCCCAGAGA CCGACGCACCCACAGCAGCTCCAGAAACCGAAGCTCCCACAGCAGCCCCA GAAACTAATGCCCCTACAGCAGCCCCAGAAACTGAAGCTCCCACAGCAGC CCCAGAAACTGATGCTCCTACAGCAGCTCCAGAAACCGAAGCTCCTACAG CAGCCCCAGAGACCGAAGCTCCCACAGCAGCTCCAGAAACCGAAGCTCCT ACAGCAGCACCAGAAACTGATGCCCCTACAGCAGCTCCAGAAACCGAAGC TCCAACAGCTGCCCCAGAGACCGAAGCTCCCACAGCAGCTCCAGAAACCA AAGCTCCTACAGCAGCCCCAGAAACTGATGCCCCTACAGCAGTCCCAGAA ACCGAAGCTCCTACAGCAGCCCCAGAGACCGAAGCTCCCACAGCAGCTCC AGGAACTGAAGCTCCTACAGCAGCTCCAGAAACCGAAGCTCCAACAGCAG CTCCAGAAACCGAAGCTCCTACAGCAGCTCCAGAAACTGATGCTCCAACA GCAGCCCCAGAAACAGAAGCTCCCACAGCAGCCCCAGAGACTTTTGCACC GACAACAAACGGTCCAACCCACTATCCTACTCAGGGAGGACTTGCTGGTA AGTAGACATTGATGTTTAAACTTCActgaaataaagaaaagaaagttgat ctgtttgatattgaatttccttgattttacaattttcaaaggATTTGTTT TTGGATCAACTTCcaaaatatattatataaaacATTCTGTACCAACAGAG TTTCATATTTTGTTATCTAGTTGGTGAATTAGGTTGTTACCAAATCAACG TAGCTAaatcagtagcgtagacaaggttggaggggcgcaaaatttgtgta ggaaagCATaattttatgacacagtaattatctattcataatataaaacg ATAAtcactgtgtcataaaaatctgctctcctacacaaattttgcgcccc tcttgtctacgTTACTGCGGAATGTTATCCTATTCTTATCTTAATCATTA GGTAATGGTAAAGCTTGGAGATTAGGTTGTTTCAATGATTTGAAGCACGA CCGAGTTCTCCCACACATGTTTGCCAACTACAGAAGTGAAATTGACTGGT ATGATATGGATGCCACCATCGAAAAATGCGCTGTCGCTGCTAAAGATCAT GGTATGTTACCCGAAACTTGGAAccactactttaatgggattaattttca cggggattaaatttcgcagttGAGCTCGTGTGCGAAAATTCAAGacttcg cggggacttaatttcacgGATGGCAATGATGACAAtattttactgtcaaa tcatgcatgttagTTCTTGTAATACGCATGATTATCGCCTCTTTGTTGCC AGTGAACATTCTAAAAGTATTCATTTGACATTTTCTTAGTTTCtaaggcc tttccaaatttccattgggacttccaaatccgcgaaatctgcgaaattta atccccgcgaaaattaatccaatagacgatatcggctttccgaattctct ccgaatgattacccatgatgcattgcgcaagaAATTCACGcaaagtcaat atcgtccgtgaatttttttgcgcaatgcatcatgggtaatcattcgggga aaATTCGGAAATCCGGTATCGTCTATTAAAGTAGCTTCAGTGattacgtt ttttttataagaatggtgtttttccatttcatcatgaatgttcttgactt ttttgggaaagtcgtcttaaaatattcttacagtttACTTTAAGGTTAGA GTCGAAATTCTATCTAACCCCGGGGgaggggcactcaaggtaaatgacct accagacagTGCCCTCCCCCCGGGTATCTAACATGTAATGATGAAGCATA AACGTTGCTTCAAGGTTCATCTAACGTTCTGAACGTCCATAATAATGTTA GaggaacgttgaaacaacattgtgtgccagctgggtatttTGTGAACATA TCGAGCCTTCCTGGTGATAATTTGCAGTTTACAGTTAAAAGTGATCTAAA AAAGGCATTTCTGGGTTctgttgccaaattccatgatagtGTTATTCGCA TCATATTCCTagttttttaagccaatttcattattaatattcttataaag tatattcttataaaaaaagtgtgtaattGAAGAGGTCAACTATGTTATCA ATTGATTTAAGCCACAATTTGAGAATATTATAGAATTCTGAGAGGttaga tattttatttttggacctatttcGAATCAATTTGAATCACACATGGGGTC ACACCCTTGTGGGTGGTTGGCGGCGTGAGCTTAACACATGGAAACAAACC TCTGAAAAGTAGAACGTTTCACAGGTAGAAAGTTTTAGAATCTTCGAATT CTATTGTTTGCAGCTGGGGAATCTAATGAGGATTGAGGAATACGAAAGAG GAATCTAAAAGTTTAGACCTACAATGGGAGAAAAAGCCTTTGCGTATTTG CATCAGCTTCTCCAGTGGGAGAAAAGATCCAAACGATTCTGTGATGAAAT AGTCAGCCGGGGGCTGAATCTGGATGGTCTCAAAAGTAGACTTGATAGTA TTTTTATCTAAATCCATACAGTGCACCGTATACTTTTGGAAGCCTTAGCT CTGGTTTACACTGTCCATTTTTCACTCTACCTATTCGAATTGTGAGGGTT GTCTAAAGTCGTTGCATTGCCCTCATTTAACGTCAATGGAATGACTTCTT TCCATCTTTTTCGTCGCTGACGTAATGAAAGCCGGCGTAAGGGATTGGAA TTGAATTAGGACTGcgctagcctgttagacgaaaccCGTTTTTTAATCGc gatttaaaaacaaagaaaaaatttggtttgtgggaaggtactggctaggA CTGCGCGAGAAATGGAGAAAATCGAGCCTTGGCcaaataagggccggcgt aaagaGGACCGACGGTAAATTAAGGCCAGTAAGAAGCACCGATAAGGTAG TCAGTCACCTTTACCCCTTCCCCCTGGATACAGGTATTTTCTTAATCAAT TTTTCTTCGCCATAGGTTACAAGACGTTTGCANACAGGTATTTTCTTAAT CAATTTTTCTTCGTCATAGGTTACAAGACGTTTGCCATTCAATTTTACGG TGAATGTTGGTCAGGACCAAATATTGAGCAAGATTACGACAGATTGGGAC CAGCCAATAATTGTTGGGAAGGTGTTGGTGGACCATTATCATATTATATG TACGGATTAGCAGAATACCACTAAGTCAATATTTTTTGGTgacgaaaaac attttttgttaccTAACTATTCATTTCAATACAGTGATTAAGAATGACAC AAGTTTCTAGTTATATCTTcagtttttgtctttttttctgttttcttttt gaataatatttttcaCACCATACACTTTTTGCAACAATATATTTCCAACT CGTACAACAATATCATATCTAATTTTTATTCACTAATTGGACATTCTTAT ATGAAATACTCTATTATCATAATGCAATATTTTGCCTGTGTTTCTATTGT TATATTTCAGGTGTGATTATGTAAGCTTCAAGTTAAACACAGGATCTAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00005594TCONS_00005594Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00005594-proteinTCONS_00005594-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000054supercontigsc0000054:609529..614778 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.47 0.61 0.3 0.15 0.15 0.07 0.08 0.06 0.04 0.05 0 0 17.01 19.46 0.01 0.04 5.41 6.02 93.42 106.1 23.06 41.97 8.97 11.63 13.86 14.15 0.03 0.1 0.31 0.55