XLOC_003329 (gene) - C. hemisphaerica

Overview
NameXLOC_003329
Unique NameXLOC_003329
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000061:151191..156461+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003329 ID=XLOC_003329|Name=XLOC_003329|organism=Clytia hemisphaerica|type=gene|length=5271bp|location=Sequence derived from alignment at sc0000061:151191..156461+ (Clytia hemisphaerica)
AGGTAATAGCAACTCAATAACATCTTTCCAACGTGACCGAACACCTCTta aaccatcaaagaattcgGAAGAAAAATCCgcgcatgaaaatttcaatcaa ttcaATCTCGATAACGCGAAATCATCAAACACAGACGGCGAAAATGTACA GCATTCCGGCGGTAGCAGTAATCCTTACGTACATGCAGACGAAAAAGCGG ATCTTGTTCAAAAGCCAAGCTTGCTGTCGACCAGTGGAGAGACGTTTACC AAAGACTCAGATCCaaactttttcattaaaagtaaaataatttttctgat attttcacACAAATTAGAGCTGTAAAAAATGTCATATCTGATCCAAAAGA TCAGCTGCAGTAGTTATTCACTGGGTAGCAGGGGGGAGGTACGAAAGGGA AAATGCCAAAACGCACTTTTTTGTTACAGTaatgaacaaaataaaataac taGATTTTAGTGAGGTACTCGTCAGTGTTAGGTctgctttcaaaattttc atttgaaatatttgacaACGCAGAGACCATTTGAAGCCGCGACAGtgact ttttaaatgtttttctctCTTTAGAGCAAGACTTGAAAGAGGGGAGTGTA GCTAAAAGAGATTCTTCAAACAACCCACCACCTCCTAACATGAGGCTATT TGGTAAGTACACTTCTTTATTCAAACCATCTAATTTGGTTAGTTTAATGG GTTATTGTGCACTCTGAGGAAAAGACGTTTTATCTGGCCCCTCCCCTATG ATAATATATACTAAGATACGGTATATTGGACGTTTTTCCTGTAGCAGGGT GTTTAAGTAGATAGAAAGATAGAAGGTAGATCAAATACCAACAGCTATTT GAATATTCCATTTTTCCAAGACGGGAATCCAAGAGATGCGACTTTGGAGG TTAAATTCTTGGAGTAAATCTGATTTCGATTCTTAAGCTCATATTCagca ttgaaataaaaatgcacAAAATGTGCAAATAAACAGATTGACCAAAACTG CATAGCTTCTTCCCAGCAATATatcatttcaaaatatatagACCGCATCT AGAACTAGATCCTATAAAGTTAAAGGAGGATGGGTTTGTTGATATTTTGG GGGCTTCTTTTACAAGTGATATTGATGTGCAAATGTGATAatcttttaga aaaacaaaagcAGGTTACTGGCAGAAAGCGAGATGAATCAAATGGTATTC TAAGTAAGtttgtttattgttttgttCATATTAAACTTTATAATATGGTA TTTGTGTGTTTATCGAAAATCTAGAACAGTCTTCATAAACGTCTTCTACG AGTTTGCGATTTGTGATAATAAACTTAAGCAGCTGAAAATAATTTCATAT ATTCctctttttttcataagaaccagtaaattcttgTTTCGACTCGGCTC TTCATATCATTTTGACACTTGGAGCTTCATATTGTTTTTATACTGTTTGC ATTCGAAAAATCGAGGCTTTTTTGCACTTTAAACCTATAAATGtttgaaa ttcagcaatttCAGGCTCAGGATTCAGGAGATTCATTTTCTAATAAAATT GCTCTTATAAaataaagagcttcattataatgtAAAACCAATAACTTCTT GCAGCATCGGATCCATTTCTCGAGGCCGTTCACTTTTGGCCGTTCGAAAC AAACAAAGGAATATTGACAAGCGATTTGATCACTGGTTCAGATGCTATCT TAATGGGTGGAgctaaaatcactaaaaaaggtTAGTAGTTATAAATCTAG TACAAACCTTATTCCCATAGCGAATCTTCGTGTTTTCCGCCGGATGGTGT TCGACCCACAGatttttaaagcccgaagggctagatgtcgtgctttaagc catcgcaggctgAATATTGAATATCGCAAGAAATAtagtttctattgttt tcgaaaatccgcgaagcttctgattggtcaagcgctgaaattctattata atgtcacgttacctaggtaggatttcctacctaaccgcggcacacttttc aacaagagcacgacatctagcccttcgggctttacaaatcTGTGGGACCC AATTAAAATAATCAAAGGGTTGTCTAAAGGTCCCATATTATACCCTTCAA TGCATGTTAAATTAAATACACAAGGGCCTCCTCTTCTACACTCTTCAACC ACTTAAACACTCCTGCGTCAAAGACCCGGCCCCGACCCCGGCCCCCAACC CCGACCCCGGCCCCGACCCCGGCCCCCGTCCCCGACCCCGACCCCGACCC CGACCCCGACCCCGACCCCGACCCCGACCCCGACCCCGACCCCCGCCCCC GCCCCACTGGTAAATTCAcccaatttcagacccaatggTAAATTGACGTT GATTTCATCCTcacttgaaattcaatggaaataTTGCACTCCAAAAGATC CCATTAGGAATTCTTTagctgggaacaatagaatttcgatTAAAATACTG AAGAAAAATCACCTTAAGACAATCCAAAAGAGAATATAACCTTTAAGAAT CCAAAACTCTTTATACCAATATCATTTTTTTCCATCAAAGGAGCACCAAA TTCACCGCAAGGGCAACAAAATTACTACAATACACAAGGAGCCAGTCACA TGCCATCGCAACAACAACAAATGCCACCGCACCGAAAGAGAAGTAGTTCC AATCATCTCCAAGTGAGAAGAGAAGAAGAGGAGGATGTAGAAGTTTTCGA CTCGTTTTTGGACACCAAAATGAACGGTAGTTACGTTATCGCTGGTGATT TTAATGGTAAGAAACAAACACCATTTATCATGATATTAGACTTAGAATTC ATAAAAATGAAAGCGAGTTCGGAAAAAGACTTGATACCAGTCGAGCGTGG CGGCTCGACCAAAATTTAAGCAAACTGGGAAGACAATTTTAGGATTTTGG GATCTTTCCGTCCCCTATTAAACGTAAGATATCCAGAATATGACCAGAAT AGGATTCCAAGCTAATTTTAATAATCTTCTTCAAAGTATTTTGGTACGTT TTCCTCGACAGGAACTTGTTTTAGTGATCCAGACTTGTGTAAGTTGAACG GGATGACCATATACACTTGGTTGAAGATTGATGCAAAAGAATTGGAGAGT ACACAAAATGCTATAGGACGAGATGCTTACATATTGAGCACTGGTGGCCA ATCTAAGAAATCACGAGGTTGGTTTACATTCAAATATTGCAcgtaaggcg aaaataaaaaaatatagtgtttccggaatgcagGTAAAGGAAAAAGGCTC TCACGCGGCCggccgaaaaaattttttttgctaatcattgaaatagagct ttaaaaataacttttatttacaaacagtatgaagtaagccctgaatacta atgcaTCAACTAATAACGagcaaaacttgatttacaagcgagaatatcta accaaacgacgtttgatagcttggacggtcaacttgatttttttcccCGG CCGCTTTCCGGAAACactgcatttttttattttcgcctaacgGATAATTA ATTTGGATTGATTTTGTATCACGTAATCAGAAGTAATTAGGATAATTTGA AGTTCCTTCGGACAACCTATATTTCTAGCCTTGTGCACAATGTCGGTTCG AGCTGGAGAATTCCTACGAGCTCTACAATTTAATTTACACAATTTTTCTA TTTCAGGTTTCGCTTTCCTATGGTTTCATGGTAAATTTGTCATGGTTATC AGTACCGaaacaaaacaatggaaattaGAAATGCCgaaagataaaataaa acacGATGAATGGGTCCagctttcttttgtttggaataCAGACACATTAA CTGGTTATCAAGATGGGACCAAAATAGGTAGCACCAAGGGCGTGGCCGCT GAACGTCCGGAAGTCCAGTTCACTATTATGACTATCGGACGTCCGAATAA TGCAGTCGACGCACGCTTCATGATGAAAATGGAAATGGCTTATTTGACGT TATGGGATAAAGCATTGGAAGTAAAAGAACTCGATAAATCATATGAAAAT AGTAAGTATTATTTGTACTCATTGCGTAGCACAACCCTGTAGTGTTAATG TACCTAGAAAAATGTTAACTCTGATCATTTACTGATTAAACCAGGAAGTT TTTACCTTGATTTAACAACTTCAAACTTGGTAAAATGaataattttatgg attttaaactgaataaaaatgttcgactTTTACAGGGTCGATAGTGAATG AAGAATTTTAGAAtctaggcgaaaataaaaaatgcagtgtttccggaatg cggctGAAGGAAAAAGGCTCTTATGCAGCCGGTcggaaaaagcttttttt ttgctaattttgataacttaagatcattgtaatagaactttaaagatgac ttttatgtacaaacaatATGAAATAAGCCCTGAATACAgctgtatcaact actaacgaacaaaacttggtttacaagcgggaatatctaaccaaacaaCG TTTGATAGCTTGGACGGTCAACTTGATTTCCTTTATGAAaaaccatatag atgaacccatagtctgcggccgggtgagaaaatactttttgttcacccgg ccggtttccggaaacactatttttttattttagccctattttctatgttt tataAGGGAAAATTGACTGAAATTACTAAATTagatttttaattactttt caACAAATCATTGTTAACTTCGTTCATAGACCTGacattcgataaaaaat tccattttttattGTTATAGTAAAACAAAAGATCGATAAGACGAGGAGAC GTagtattttagaaaaacattctACCATACAACAGCACGCATTGGTGAAC AGGGAAATGCAAAACTAAACAGCTGAATTCATGTAACTTGACAGAGATAC TGAATCACCATACAAGAAGCTCTCCGAGAAACCATGTCTTGAAATAAGGC GACGGTGTGATGTAGAAAAATTAAGAACTTTTGCGTGTGTAAAATACAGA CCAATTCGCTTCGTATGCTAATGACCCTACGAGGAAAATTTCGATAGGCT TAACGTATAGCCGTCATATCATTCGAACTAAATAAAGTGTTATgaaaatt ttgtaataaaaatcaatGATAATCAACCGTCAGTTTGAAACGCCTGTAAT GTTTTACTACTGATTAAAACAATAATAATACTTTCCCAAGAATTTATTTT GGTGGgctaaaaatttgatttgatttgatttgattaagTAGCTCCCGCTT TTTTGGAATCTTGAATTATTTCTagtaattatattttttaaatgcatgta aataaattaaaagaaaattaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00005834TCONS_00005834Clytia hemisphaericatranscript
TCONS_00005835TCONS_00005835Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00005835-proteinTCONS_00005835-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000061supercontigsc0000061:151191..156461 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.02 0.07 0.08 0.04 0.19 0.37 5.96 8.35 3.96 2.54 2.65 2.47 6.57 6.02 2.23 8.23 3.98 4.36 0 0 2.94 2.82 2.37 2.4 8.59 13.18 0.66 0.18 0.02 0