XLOC_029592 (gene) - C. hemisphaerica

Overview
NameXLOC_029592
Unique NameXLOC_029592
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_109:28569..32442+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029592 ID=XLOC_029592|Name=XLOC_029592|organism=Clytia hemisphaerica|type=gene|length=3874bp|location=Sequence derived from alignment at scaffold_109:28569..32442+ (Clytia hemisphaerica)
ATTCCACAGCAGCAGCTAGATAAAATTCAGAAGGGTGAGTTTGTTAACTT
TAATTTGCTTCTTCCCCAGCCAGCTTCTGCCTCTAATTCAACTCAGTCAT
TTACCCTTTCTGTTTCGGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGAA
CACTTAGCCCCCTTACTGATTAGATACCAGGAAAggatttgcagattttt
cacgaCGTATCCCTTTCAATGTGTGGCTGATTATGACGTCCAATTTAGAA
GGAAGGAAGTTGGCTGTAAACCCAACCGAAACCTTCTAGGACAGAATCGA
CCTggatattttttcttcaactttgAGGCCTCAGGTTGGTAGCTCTTCCT
CCAGCCAAGCTGGTTCGTTTCCTGATGTGACTTGCTacaaaagtaagaaa
aaaggTCATTATGCAACTAGGTGTCCTAACCCTTCGTCCTCACAGGACCA
AACTACTAGTACTTTCACGCAGTCTCGACCACCTAGACCTCCCATTTCTG
GTGCTAATCTAATGCACAAAATTCCTTTCAAGGAAGTGCCCATGATGCAG
CGACTGAGGCATGCCCCTATTTTAACTCTAGCTTCTGCAGGAGAGGCGCC
ACGTGTCATTATGCCCATAAATGCTCCTACTGTGGAAGGCCAGGTCACCC
AGCACACAGTTGCAAAGCATCCAGGCCCTCTGGATAGTGTACCAGCAGGA
TTGTTTCCCTTACCTCCTTCTGCTATTTGCAGGATTAATTTACGAttgtt
tcttgtttttcttgagGGTCATCCTGACCCCTACATTGTTGATTCTCTTA
AGTCTGGTTTTCGTGTTGGttttattacaaaaatgacACCAGGAAGGAAA
AGACCACTTTCATCGTCCAATGATGTTTCTGAGAACATTTCTACAGCCAT
TCTCAAAGCGATGAACAGAGGACACACAAAAGGTCCCTTTGCTATACctc
cttttaaaaatttccaagaGGGTCATCAGTCAATGATGGTATCTCTAGGG
AAgctttttctgtaaaatattCTAAGTTTGATGATGCGGTCGATTTAGCT
GCTACACCTACAGGTTGTTTCATGGGGAAAAGGGATATTAGACACGCTTT
CCGGCTCTGCCCAATTCATCCGGAAGACTGGCCTTTAATGGTTTACTGGT
GGAAAGGCAAGTATTATGTAGACATTGTATGCCTTTTGGTTTGCGCTCTT
TCCCATACATTTTCAACACATTTGCTGACTCCTTGGTGTGTATTTGCAAA
GTTAAAGGAGGAATTAAAGACATGTTACACTACCTGGATGATTATTTCTT
CACTGGTTCATCTGTAGATATTTGTACACAAGCAATGAACCAATTTGACA
GGATTTGTAACAGTTTGAACATTCCCCTATCAGAGGACAAAAAAGAAGGC
CCTTGTCAGAcaataacatttttaggcatAGAAATAGATACTCCGAACAG
GTGTTGTCGATTACCagacaaaaagttaaaagattTGTTAGGTAAGTTAC
AAGGCTGGAATAACGCTTCTCAGACTTCAAAGCGAGAGATGCTCTCGTTG
ATTGGTTCTTTGTCTTTTGCAGGTCATTAAGCCAGGTCGCACTTTTATGA
GGCGGTTGATTGACCTCTCCACATCGGTGACAGAGCTTAGTGGCATAGTG
GAAATTTCCGAACCTGCTCTTGAAGACATCAAGTGGTGGAGTGATTTTGC
TCCGAGATGGAACGGGACCGCTTTTTTCCAGGATCCTGTAGTGACATCAG
AAGACTTAGATTTCTTCACAGATGCGTCTGGTTTCGGGATAGGTGCTGTC
TTGGGTCTTAAATGATTTTCTGTTGCCTTATCAGCTTCAGCACAAAAACT
CCTATTCATATCTTAGAGTTTGTTGCAGTTGCCATGACTGTAATTACTTG
GGCGGATAACCTGGTTAATAAGCAGGTCACTATTTCTACCGATAATTTAG
ACATTGTTCTCGTTTGGCGTTCAGGTTCCTGTAGAGAcaaacttttgatg
aaactaGTTCGAcacctttttcttttcattgcaAGGATGaacatcaattt
tcttttgGTACACCTGCCAGGCAAAGATAATGTTTTTCCTGACTTACTTT
CTCACCTGCAGGTTGGCCGGTTCTTGAGTCTAGCCGAGTCCGCCAGTCCA
GAACCTTNCTTACTTTCTCGCCTGCAGGTTGGCCGGTTCTTGAGTCTAGC
CGAGTCCGCCAGTCCAGAACCTTCCAGGATCCCGGAGGAAGCATGGGAGA
TCTTAGACTTACTCGAGACCGTTTACTAGCTGAAGGTATCTCTCGAAACT
CTTTGCGCACATATCAATCAGANGTGCACATATCAATCAGGCTTCAAtcg
ttttcaaagattttgcttcatGTATTGCTTTGTGTGGTTGCCGCCACAAG
AATTACATTTAGAACTATTTGTCACTTCTCTTGCGAGACAAGGCCTACAG
TACAATACAATAAAGGTATATCTCTATGGAATTCAGTTTTGCGCACTACA
ACAAGGCGTCGAAGTTTTGAATAATCGTCGAAGAATTGCTTCCATGCGAA
GACTCTACTATGTCTGTAGAGGGATAAGGCGCACTCAAGTGGCTAGAAGA
AGGACTAGAAATCCTATCACACCTGCACACCATCGACAAATGTTATCTTT
TATCTCTAGCAGTCAACTTTCTGCCTACGACCAAGCACTTTGGAAATGTC
TAGTGCTTACAGATTCTTTTGGTCTTCTTCGAGTTTCAGAGTATACCTCA
GCTAGTTCAAGGTCATTTGATCCATTAACAAACCTTTGTGTGTCAGATGA
TTCCTTACAAGGGCCTAGTGTACTTATCAGAATAAAAGCAAGCAAGACAC
ACCTTTTTCGTGTGGGAACCAGCATCACTCTGTGGGAAGGTTGTGCACCC
CTCTGTCCTTTTAATGCCATatcttctttttactttttccgGATTACACG
TCCACCTGGACCGTTCCTCGTTTTGGAATCAGGCGAATACATTACTAGAA
GTCATGTCACcagatttttaaattcttcacTGCGTGATGTCAACATCAGC
ACACATAGTTTTCACATCGAGGGAGCCTCAGCTGCATCATCAGCTGGTAT
TCCTGACTCGGTTATACAATTGATGGGACGATGGAGAAGCAACTGTTTTG
TGTCGTACATACATCTCAACAACACCACTTGAAGAACCTGGTCGAGAGAA
ATGGGACAAGTACATTAGGAGTGTTTGGAATGATAAAAATTAAGACTTTC
AAGAATGGTAATTGCTTGACGAAGTGAACAATAAAAATGGATACCTGGAC
ACTAATTGGTCAAATGAATTTGGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00046343TCONS_00046343Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_109supercontigscaffold_109:28569..32442 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.54	3.21	0.34	0	5.14	6.5	4.27	4.45	3.66	3.81	7.51	4.93	5.9	5.77	7.63	5.4	8.72	8.74	5.38	3.57	8.81	8.72	4.21	5.52	23.52	15.63	2.34	0.9	2.42	3.57