XLOC_029684 (gene) - C. hemisphaerica

Overview
NameXLOC_029684
Unique NameXLOC_029684
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_113:118501..127164+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029684 ID=XLOC_029684|Name=XLOC_029684|organism=Clytia hemisphaerica|type=gene|length=8664bp|location=Sequence derived from alignment at scaffold_113:118501..127164+ (Clytia hemisphaerica)
NNTCATAATGGATGAGGAAGATGGATCACATCACCAAGAGCCTGAACGTC CTTTAGTTTATGAACcacctgatctagaaggaagaCAACATGTAGCTAAA GGTACCTCACAGACACAAAACAGTACCTATAAACATAATAAGACGACTTT TGTCTTAGAAAAACTGCTTCCATACACAAATTATTTTGTACTCCTCTCGG CAACCCTTTTGAGATATTTTCaaacagaaaaaattaaaagatattttgat aaccaatttttaaaagttaagaAATATATCTTATGAAAATTATGGCAATA GTAGTTTTGTAGAGGTAGTAATAGTAGAGGTGTATTCTGTCCAGGCTGTC CTTTTAATTCTATTTCCATTCACCAATCACCAAATTCATTTAATTCTTGA TTTTATTTCAAGTCACCAATGATTTCCGAATAAGGGAAGATGAATGTTTG GCTGATAAACTGCAAAATGAAGAATGTAagcaaagatattaatttttttt ttcattctttcagGTATTATTTATGCTTAAGTTTAGAGTAAGATAAGTTT TTCATGAGACAGACAAGTACAGTAGTGTCCATTTTCAAACGTGAAGGGGC TTTGAATAAACAAGTTTTGAATAAGTTTTCTATCTGCATATTATTTTCTT TGACATCAAGGTTGAACTGTATATTACTTTCTGTTTTAGTCGAATATCAC TTTGGACAAAACCGTTCAGAGAGATGGCGTGGTCAATTGGACATCAAAAA AGCCAAACAAATTTACTTGCAAGAAGTTGAGAAAGCTGGGCTACTTTCTA AAGATGAGATGAACAAGCTGTAtgaatctgaattttttttcttttgctag AATCATTTAATGAATTTCTTCTAATAATTTAGCCAAATGAAGCTGCCATA AGTATTTCTATTGTGTTCTGTGATAAGCTATCTATTTTTATGTACCCAAA ATTAATAGTTATTCTTTCGTACTGATATTTTAAAAGGTTATAAATGCAGA GATAGAATTCTGTAATGTTTAAAGTTAATTAATAGTACTGTTTTAAATTT AACCCTATAAATCCACTTTGGTTATCACAGTTTACGTTTTACCCATGTAG ACTGATATGGATGGAATCTGCACATTacatttcaaataatttaataaatt cTTATAATTCGATAACTATCTTAATATTGTAAATAAATAACATTCTAGAT GTGTCCAAGATGCGGCTCTTGCGACAGAAATCGACTCTCAAATTAATGAA AAAGTAAGTTATGCTAACTCCTGCAACGTACACTTTGTCCTCCTGttcta ctacacgtttttttataagaacatacaaaatttttgaagccttcgaaatg tttttaactttttgagttttaagcctacaAATGTTATTATTTTCCCCATT GAAACGAGTATTTCTGTcctttttcctaagaaattgggtgttttagagcc agcaaagccttaaaatgttcttaacttgttcttaatatttttgttcttgt atagtttgtccttataaaaaaacgtgtatcatccCCACGCTAAAAAACTT TCGTGAAAGGGAACCTTCATCAAGCTTTTATGGGTTGAATGACAACAAAA ATGTGAAATCATTGCATTGATGTATACGCTTTATACGCTCACAGAAACAG ACAATAGACGTTTTTCAATCTTGAGCCTTTAGAGTTGAATAGATATATTT TCTACAGACTCCTGGTAGTGGTATTTTTTATctaaatgctttaaaaaaga aaagtaaacaaaacttttaaaatacaaTAATTAATTCTTATATTTATTAA TTAATTTAAATTGTCAAAGAATATCCTTGCACTGTAACCTGAGCTAACAT TATAAACAATCTAAATCCCCAAATAATATTACAAAACAAATTCCTAGAGG ATTCTATCATTAAGTTTGATTGAATAATGATATGAAAATAAcagtaaaaa agaaataataaaatgacaaaagattTATTAACAATAAAATCCATACATTA ATGTGAACATCCTTAAAAAAGCTGTTCAGAATTACCTATTTTCACTGCTC ATTTCTCGTCAAAGATTGCAGAGAAAGCTTTTATCCACTTTCTCAATTAC TCACCACTTTTTACCCTTCAACCCCTGTAGTTGTAAAGATGATCAGTTCT TAgcagaagaaattgaaaaaagactTGATAATGAAGTGAGTATAATTCCA TTCCCTCTCTTCTTCCCCTCCTCTCCTAGTCCCTTTCCCAAGTTCTTTCT CCTGCTATTTGTAGTTCGCTACAAAGTTTTGTACctaaaatcaatgtttt ttatttccttttaaGGAGTAATTTTAAGGTCTAAGAATCCAAAAAGTACA TTTACTTAAGAATTGCAGATTGTTTCTTGAGCTACGGAAAGCTTGTTgtc ataaaacaaaaacaatatattcatgatatgcaccattgcaatgtcttcca cggacccaacagctgattggttgaaagtgacgtattgactgattttacgt cacttgtaACCAATCAGCaattgggtccatgatgtaatgtcagaagacat tgcagtggtgcatatcatgaatataatgGTCTATTTCAAATCATCTCCAT GACGATTTAAGATAATTTGTTTATGGATCCTTTTTTGACCTAGATTTTAC ATCTGATACTATTTACCAAGGAAAACTTTAAATTTAGTCATGATTTATTC AGATTTATttccatttatttattttcaaataatagaAAGACTTGGATGCG CAACGGAAGACAGCTATCGAGATGCAGGATGAGGTACAAAATACATTTTT actcaaaaatgaaaagaattgcCTGTACTGGATTCTCCTTAGTTGAAAAG CTTATGGGCTTCAAGCAAGAAAAACACTATCTTACACTTATGATACTTAT TTTAAAGACGACCTGGTGGGTGAGGTGGTCTTTCTGTTGCTTAAACAGGG TTTTTTAAAGGTCTTTTCGAAGAAATAAACCCTATACTGCAAGTTCTCTT TGTTaagttataaaaagttatttggCATTTGATTCAAACAAAGCCAGAAA TTTCTTATAACCGTATCATTATTTAAACCATTAGGAATTTGCGCGTTATT TGGAAGAGAGGGAACGAAAGAAGTACGAACATGAACGAAGAAAACGTTTA CAACAACGATTAGCTGAAGATAAAGTGTCAGAAGGAAAGATTGCTGCCGC TGCACGTGCTAAACAAGACATCAGAGGTATCACAGGGTCGGGGATAGTCT GTGTCCCCTTGGTGTTTCTTTTAAACCCTCTTAAACTTCTTTCCATACTT ATAACTAACTTTGTTAACCCTTCTTTTAANNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGGAAAACTTTAAATTTAGT CATGATTTATTCAGATTTATttccatttatttattttcaaataatagaAA GACTTGGATGCGCAACGGAAGACAGCTATCGAGATGCAGGATGAGGTACA AAATACATTTTTactcaaaaatgaaaagaattgcCTGTACTGGATTCTCC TTAGTTGAAAAGCTTATGGGCTTCAAGCAAGAAAAACACTATCTTACACT TATGATACTTATTTTAAAGACGACCTGGTGGGTGAGGTGGTCTTTCTGTT GCTTAAACAGGGTTTTTTAAAGGTCTTTTCGAAGAAATAAACCCTATACT GCAAGTTCTCTTTGTTaagttataaaaagttatttggCATTTGATTCAAA CAAAGCCAGAAATTTCTTATAACCGTATCATTATTTAAACCATTAGGAAT TTGCGCGTTATTTGGAAGAGAGGGAACGAAAGAAGTACGAACATGAACGA AGAAAACGTTTACAACAACGATTAGCTGAAGATAAAGTGTCCGAAGGAAA GATTGCTGCCGCTGCACGTGCTAAACAAGACATCAGAGGTATCACAGGGT CGGGGATAGTCTGTGTCCCCTTGGTGTTTCTTTTAAACCCTCTTAAACTT CTTTCCATACTTATAACTCACTTTGTTAACCCTTCTTTTAAACAATACGA AGGAAGATGGGAATTGTAATTTTTATGCAATACATTATTAttaatatatt attattatttgattGGCACTAAGTataagaagaaattttttgtcagTATT AGAAGAAGCGTAATTTGGTAATCGTTATCATGAGGCAGGCTTTAGATTCT GTAAAAACTTGATTCAGGAATTACACGACAATTTGTCCATTTACTTTATA GTATCTGTTAGTTCATTAAACTGAATTTTTTGTTATTCGGTCTTTCCATT CAATCCAGACTCGATTTCTTTCTAGATGAATCTGGCTTGGAATCCGGTGC TTCCGAAATGCGAATCCGATCTTCGTCACAGGATAAGTGGGACGTGCAAT GTGAGAGTTCAGGGCGTGCTCGAAAAACGCCATCTAAAGATCAAGAGAGG AACGGTAGGAGAGATGAAGAGCGAGAACAAAGAGCAAAAGAACGCGAAAT GCAAGAATTGAAAGATAAAGAAATCGCTAAAAGATTGCAGCTGCAAGAAG TGCAGAGCGGGGTATTGTTACAATTTCTTCATTCTTTTACTCACTTTGAT ATTCATTActatactttaatcggattaatttttgcgataGTTAATTTCAA GAGccaaaaaatcgcgaaattttgcgtggatttttttttcgcgaattAGC CAAAAATTAGTTGTTGCCATATGAACGACAAAAATTGTCTATTTTACACT GAAAAAGGcaaatatttgcaaaaacgcgaaattaaatctcgcgaaaattt atccgattaaagtattatTCTTTCGCCTATCACGAAGTTTATGTTCTGTA AcaataaaaagtgaaatatggattttgttttgttggttaaCTATCCTGTT TTCATATCCTTGAAAGGAGAATTTCCTCTTTGTTGATATTCGATGGGCCA ATTTAAAGAATAAATTGCAAGCTTGTCGAATGATGAAGGTTCGGATATAG CCATCTGAGTTTAATTGTGTAACGATCTTACTTTTTTTTCAGGGTAATCA TCGCTCTGTAGAAGAACGTGATAGAGTAAGTATTAAATGCATCAAATTGT TACATAAGAATCACCTGTTAGTTAATCTATGTATTAATCTATCTGTGTTC CTCATGCATACCAAGGCGGCTTTAGAAAAACATATCTTATATGAGTTGAT TTTCTTGGTTTCCCGCAAGCAATAAAGTTGTTCAGaattaaatttccttt ccaacggtatataatatatTAGGGTTTTTaggagacgaaatttttgcaaa aaaatgctgacgtcaacaGAAACATCATATCTGATTTCGTTCGTTGTATT TTACACTGTACACACCTTCAAACGGTCATCCCTATAAATATATTATTTCA TCAAATCTCAATTTTGGAGAGCACAAAAAGTTGAAGAAAGTACTTTCTTT AGTTTAAAATTATTtctcttaatttgttctttttcCGTTTAGATGATTGC GATGCGTCTGCAACAAAAAGAAGCGCAAGAATATAAACGCGAAAGAGAAA TGCGAAGGACTCAGGTAATGTTAATTATGAATTTAATCAGCAAACGTTGA TTTTcatggaagaaaaaattcccttTGGGAATTTACGCTTATTTTTTTGT CACGCTTGAAGCAAATATGATCAATGTTGACTGATGATTTTATCATGCAG TGAAGTCTccaactcgaacacgcacggggaacacaaatttgttcgagtta aaaaaaaaattcgagtaagctttataaggcattgtaaactgaagggacga gaaaacttgtttgagttaaggagactgGATCTTTAGCGTCATATCATTTT CTCTCCTCAGAGCGAAAGGCGGCCCGAAGATTACGACCCTCGACACAATC CAAACGATCAATACGATGATCGAAAACACGAAGAATCGACTCCTTCTCGA AGTATGTCAGAAAAACCTCAACGTAGCAAACACGAACACTCTGAGCAAAG ACAACGACCGTCAGAGCATcaacgacaacgaccacccGAAGAAAGGGAAC GTGCGTCTGACAATCAGCAACGGAGACAACGACCACCTGAAGAGAGGCAA AGATCTTTAGAGGATCGAAAACAACGACCACTTGAAGAAAAACATCGGTC GTCAGAGCAAAGGCATAAAACATCACAACAGCGAATCGAAGATGAACCAa tttatttgaaagctgttgATTCCCCTGAGCACAAGAAATCAGAACCGCGA ACAACGGACGCCAGACGCCGCGCAGACCAACCAATCGACCGCGAGAGAGC TCTTCGTCAACAGGAAGAACTTTACAAACAAGCTCAACAAAAATCGAAAG AAGAAAAACGAAGACATGGTTCATCATCAGACGAGCGAAGGCTAGTTGAC GATCAATTACTGATGCGTCAACAGGCTCGTGATTTGAGTCGCGTCGGTGG ACAGCAGGCTAGCGAACACCGTTCTACGCCgtcaaaaaacaaaagtaatc AACGTACGCACCATACACCACGTAGCGACGCATATGCTGACGATTATGTA AACACGCGACCGAGCGGGCACGCACCCCGTCGCAACGAAAGTATGTACGA CGAACCGGAACAGAATAATTCTATAGACTACACAAATATTGCCCGAAATA TTGATCCGACTTATCAAGGGAAAACCCCTGAACCCGATTATGAGACGATC GGGCGACCGGGATTATACAAAGGACAAGTTGGTGTCTTAGAACCGGAAAA CCCGTTGTCCAAGTTGCCGCCTGCACATGCGATCCCGAATGTGAAACGGT CTTCGAAGAAGgatgataaaaagaaaaacaaaaaatggttttaaattttc gtcgtttttgaatgtttttatgtgTTTTTATGTATGTTTGGCTTTCATGT ATAGACTCTTCATGACTCAGCTTCCTGTTATTTATTCTTGCAAGAAATAC TTCTAGAAAAATGCAATACTAGAATCCGGTTTTCCATTCGGGAAGAgtct atttttaaaaacatcaaaactattTTAAGGAGGCCTTCTAATAAAAGGGT AAAATTATATTAGGATGATAATTATTGATTTTAGAGATTGCACTGCGGTG AAAACGGTgttgtaaattttttgtttttatatattttattatttttgagt TCTAGCCTATCAACATAGTTGATAATTCCAGgctaaaaattttgattggt aAAAGGTTTATGTTTTTGATAGAATNTTCAGAACCGCGAACAACGGACGC CAGACGCCGCGCAGACCAACCAATCGACCGCGAGAGGGCTCTTCGTCAAC AAGAAGAACTTTACAAACAAGCTCAACAAAAATCGAAAGAAGAAAAACGA AGACATGGTTCATCATCAGACGAGCGAAGGCTAGTTGACGATCAATTACT GATGCGTCAACAGGCTCGTGATTTGAGTCGCGTCGGTGGACAGCAGGCTA GCGAACACCGTTCTACGCCgtcaaaaaacaaaagtaatcAACGTACGCAC CATACACCACGTAGCGACGCATATGCTGACGATTATGTAAACACGCGACC GAGCGGGCACGCACCCCGTCGCAACGAAAGTATGTACGACGAACCGGAAC AGAATAATTCTATAGACTACACAAATATTGCCCGAAATATTGATCCGACT TATCAAGGGAAAACCCCTGAACCCGATTATGAGACGATCGGGCGACCGGG ATTATACAAAGGACAAGTTGGTGTCTTAGAACCGGAAAACCCGTTGTCCA AGTTGCCGCCTGCACATGCGATCCCGAATGTGAAACGGTCTTCGAAGAAG gatgataaaaagaaaaacaaaaaatggttttaaattttcgtcgtttttga atgtttttatgtgTTTTTATGTATGTTTGGCTTTCATGTATAGACTCTTC ATGACTCAGCTTCCTGGTATTTATTCTTGCAAGAAATACTTCTAGATAAA TGCAATACTAGAATCCGGTTTTCCATTCGGGAAGAGTCTATtgttaaaaa catcaaaactattTTAAAGAGGCCTTCTAATAAAAGGgtattttgtttga aattttaaattatattAGGATGATAATTATTGATTTTAGAGATTGCACTG CGGTGAAAACGGTGTtgtaaatgttttgttttttattatttttgagtTCT AGCCTATCAACATAGTTGATAATTCCAGgctaaaaattttgattggtaAA AGGTTTATGTTTTTGATAGAATGGtcatgtttgtttgtttttttatattt taagttatatttattacaaatcacattttaagtttttctacGCATCTTAT TAAGAATTGTACAATatgaatttatacttttttggaaaatagatAGATCT AAATTTAACAGCCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00046500TCONS_00046500Clytia hemisphaericatranscript
TCONS_00046501TCONS_00046501Clytia hemisphaericatranscript
TCONS_00046502TCONS_00046502Clytia hemisphaericatranscript
TCONS_00046503TCONS_00046503Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00046500-proteinTCONS_00046500-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_113supercontigscaffold_113:118501..127164 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.01 10.5 3.25 2.27 39.73 31.19 28.76 31.38 15.71 23.71 16.73 10.7 13.2 12.77 11.19 11.34 17.89 12.85 10.3 10.27 11.96 11.78 16.23 15.38 16.06 16.95 13.26 11.88 13.21 13.7