XLOC_029730 (gene) - C. hemisphaerica

Overview
NameXLOC_029730
Unique NameXLOC_029730
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_114:27812..35660+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029730 ID=XLOC_029730|Name=XLOC_029730|organism=Clytia hemisphaerica|type=gene|length=7849bp|location=Sequence derived from alignment at scaffold_114:27812..35660+ (Clytia hemisphaerica)
agaaaaaataatctaGTGAATGTTTTTAACGAATAAGTTTCTATTTTGGA GCAATATTTTTTGGTATGAGCAGAAAGATGTCGAGATTCTATATTTCCAT TTTGTTCTTCCTTAGTTACGATTCCATTCTTAGTTCTTCATTAGAAAATG TCAAGGTGGATTTGAGTAATAGCCAAACTACTCGTTTAGTATGCCCAATC AGCGAATCACAATTCGCACAATGGTTTCGTGTTGATAAAGGGTCTGGACA GGAGACGGAGATCTTTTTCGGTGAATCGCGGTACGAGTTCCCTGATTTAA ACTCAATGATGGTGAAAGAAATTAGTGCAAAGGATGATGGGACTGTTTAT AAATGCAAAGTCGTTTCGGATGAGCTTGCAAGTGATATTACGTATGATGT TAAAAGAACTTTCAAACTGATCGTCAAAGGTAAGAAAACCTCCACCATGA GAATTGTTTAAACCTTAAGGTTTGAAAGATAGTGCTCAAAAATCATTGAC CGAAAACCGAAAAACATAGTGCTCAAAACTCATTGGCATGATTCAGGATC AAAGTTGTAATTTTTATCTTACTTGGTATTGAATATCCTGACTTTGGAAc cagccaatttttccagtatcATCTATGATCTATGATATTATTTTAAGTTT CTATTGTATACCACTTACatggatttctttttattttttagaaaacaaaa gtggATCGACCACCAGTATTGAAAGTAaggaataaagaaaacattaggCC AAAAGCCTTGACTCATTTTCACCGGAGATAAAATACAACCtaaaatctac aaaaagatCAATTTTGATTTGTAATTTTCTCTAGAGAAGGGTAAATAAGG GCAATTTTTATTAGAGTAACGATTTTCtaccttaaaagaagaaattttgg cgggaatttaatttggcggatggccaaaaaagttttttcagagggaattt aatttggcggatggacgaaaaaactaaatttggcgggaatttaatttggc ggtcgtttaaaaatttaaccttaagatggcgtcaaaacagcgaaaaaata gcaaaaacaccttaaaagagatcatattttcaaagtgtttaatttggcgg gaatttaatttggcggatgatggaaaaaagaaattttggcgggaacttaa tttggcggatttcagtcaaatccgccaaatccgccaaattttctttccgc caaaatttcttcctttaaggtagcttGTGTTTTTTTACCCGACGTTTATT GAACGATAGAGTGAGCGAACAATAATTCCCTAATATGGTAAAAACCAAGG GCACAATATCATGGTGAATCCATCTCCTATTTCTTTTCTAGAACCGACTT GGACGACGAGCATTCCAAGCAAAATAAATGTAGTGTCTGCGAGCAGATCA TCATACGCCTTATTTCCATGTATCGCCGAAGGGGTCGGCGTACATGTGAC GTCATATCGGTTACGTGATGACGGACAAGTGTTGAAGAAATTGAAACGGC GCACAGTACAAGGCGTTGTGCTGATTTCACCCAAAGGCAAGGATAGTGGG AAGTATAAATGTGTGGCTGAAAACAAGGCTGGAAAAATCGAACACGTTTT CAAAATCGAAGTCGAACGTAAGCATAGTTCTTTTCCACCGTCAGATGATT TTATTGCCTGTAAAGGTCACTTTTCActtataagaaatttttgccaagCA TTCTCAATAAAACTGTTTGTTAAATCTGTTTTAGTGACGGTTAAAGCCAA TATAGTTGCGTgtcctgaaaatattttctgcactttcctttttttctcaa agaggCCGGCAATTGGGGTGCATGGACCGAGTGGAGCAAATGCAACGTGG AATGCGGAATTGGTGAAAAGTTTCGAGTACGAAAATGCGATAACCCTCCA CCCTCCAACTCCCGCCGATCTTGTCCAGGAGAATCACTACAGAAACAGCC ATGTCAAGAGAAAACATGCAGTAAGACTCAAAACATTCTTCCTTGTTTAG AGAAAGAACGACGGTATTTTCTAGCgagattgattgatttaaagCGGGAT AACACGACCAAGGATCTAgtctttaaccctattagccccaagcttttttg acttttgtatcccagggggggggggTAGAATCTACCACCCTCGATTATTT TCGATCTAGAAGGGCTATGGCCATGAAATTTGGTACAGATGTTCTCCATC ATGATAAAATTTTCCAGGAAGAAGAAAAAATTGACGACGTCATTCAAAAA CTGATGACGTCATTCAAAAACTGATGACGTCATcacaaaatttccacctg tcggaaaaaagcccaaatatatggtttacaaaaatgtctattacagtcga accaataaagatatttcaattctgtttgaagattccgaaaggtaaaagac tgttctttaacataatagccggttttgcaatttccatgaagattttCTCT TAAAATCTATGATGAAGATGAGTAAAATTTCAAAATTTGATGACGTCATA AATGATGACGTCATCATtttcaaaaattttctttagattttttaaatttg tattatcaatgcctatcacgtgtcaaaatttgaaaatgattgaataaata gtttagaagttatcagttTTAAGGagtttagctgggttttatgtcatgtt tcacaataaagtcataaaacctgatctggacaacctatgaccctataatt ttgtacaagtactcttaataagattttattaaaagtcagaaagtttcaag tcgtttgaaaaattattctccgagatataaacaaaagaaatccagcgtgg tagattctaccccccctggggctaatagggttaagcatcATTagttaatt gaaatttttttggatgACGCATGAATTTGGGTGCTACTGGAGCATTTTCA CAATTCTGACTGTTTGACCTCATCAAGTCAGGTTTTGATTGTttagttaa aaaaattcagcaaatttgaaataaataaatttgtttCGTTTCAGGAGAAC CAGTGTTGACGAAATTCGGTTTTGAAGTTACAAAAGACAATCTACTATTG CACTGTGGAGCTAATGGTAGGTAGAAGCTATACCTTGAAACGACGAAATA CCGAAAGAGGTCATGGTGTTCACCCTTTCTAGAAACACATAGTCAATTAT CTACCAGAACTCCCTTTTTGGAAAGAGTTTGAAAATATAAGCACGACACA TGGGCTGATGAGTTggcattttttaacaaaataaattaataGTAGGGGCA TACAATCTTTGGCCGTGATGTAAGGTAAACAATTGGGCCAGTGACATGTT TTATAGGATTAAATCAAACTGGTTCCATTCGAAAGTAAAaggttttaaaa acttttttgagtcataaaattttgcataaatgatgaggattttacctttt ttgggacacattgtagtaaaaaaaaagtcaatgttCATAAACAGTTCCTT GTTGTCATTCTAGGTTTACCAACGCCTACCACGCAATGGAAAAGAGACGG AGCCTTGGGAACAGAAcctttggaaaaagaaaattacaaagaaacttTAA TTATCCCGAGATCACAAGCCACCTCTGGTCGCTACACATGCGTGGTCAAA AATCAAAGATGGATGTACAGGATTTCCATCAATATCGAGCAAAAACAAAT CAACGTCGAATTCTAAAGGGAGAaaaattcaataacaaaggaacATTTCA TAGTTCTTGGTAGTTCCTTATATGgtttaaattatttgaaatacATCAAT GCTATCATATTGTATTCTAATTTTATGCGTATTATTTTTCTGAGAGGTCA CATTAGAGTACGTCATCGTCTAGACTATGccgctatagtctaagacaaac tatctaagaaataagccgaACGCTGAAGAATTcacaaacggttttttttt tgctgaaaagagtTTAAAGCCGGCAGAGTTTGACGGTCTTCGAAACTCTA CGCCGATGTTTTTGTCCGTATCCGCCATTACGCCTGTAAACTTCGCGCGT ATATATTTCCCCGTCTTTAATATCCCTTTAACAGTCTAATGATAACATTG CCTACATCGTCAAAAAGCCTAATTTTCATAATGACCCAAAAGTAGAAGTG TTTATTGAGGTACTTAAAATGATTGTATGATAAATTGGGACATTTCTATG GCAATAGTTCCTCTCATTACATTATTTTTAGTCCCAGTACTTACAATGGT GACGAAAAATGATTTGAGGTTGACGTTTATTGACTTTGGTTGAGAGGCTT ATAATCTATGGagcaaacaaaaatattttgctttacAATATTTTCGTGAG ATGGTTTATTTATTTCTGCTGATATAATCAAAAAGTGACGTCTTAAGAAC TTTAGAAAGACGTTAAAACGATGTTCGGTGTTTGTGTAAGAAAGTGACAA CGAGGGTTTATAAAAAGTATGAAAATTAAGTTGAGAATCTTCACAAATTC TGGTACTGGTGATAAGCGAATTAAAAAGTTAGTAGTGGAAAGGTTGAAAT ATCTCAAAGTAGGAAAATGTTTTGGGAAGGGGCATTGGTTTTACTGTTGA TCAATCATGCGGTGGCCCAAGGTGGACCGTTCGATACCAACGCTGACGGA GGGAGTAAGTATGAATTCTAAACGCTATGAAAGTTATATAAACAATAATT aatttggtttgatttggtttggTTCTAATGGATATGGAAGACTGTTCTCC CGAAGCagtttttagctaaaaattgtTCAACGAGCCTTTCTAGCCTTTGC AATCTCATCAAAAATATTCTCCTCGAGAACCTCTGAAAAAGTTTTAGTTA AATGGCCTTGACTTATCTAGCCTTTAAGAATCTCAGTATAGATTGTCAAG TTTGAAAGACAAAAAATGTAGAAAGATCTGACGTGATAATAAtttcgatt cttttttttttcagttcggCCATGGATGAAAACTGATATCGATAATAAAA AAGGTAAACTTTGATTGGTTGACTGCTGTTGACTGTGATTAGAAAGGGCC TCAACAATGATTGGGCAATGAATTTTGTCCTGATATCCCATAGCAATAGA CCTTAtgggatttttttatttttctaaaacagcgatgcattgtgggattg tttcgggggtattacaatagaattccctcgaggaattcctaagagatttc tatcgtaatactcccgaaacaatcccgcaatgcatcgcttttttagaagt atcaaaaactccgataagatctattataAATAATCTCTTAATAACGACTT TCTTTCTAGGTCCTAAAGTTCCGGAAGATCACGTGATCGCGAATTTGAAT GAGAAGAAAAAGATCACTTTCGAATGTCCCATAGCAATAGAAGACGCCAG CACCGTTTTCGCCACGTGGTATAGACTTACAAAAAGTGGAGCCATGTCTG ACCTTATGTATGAGGAAGGCAAATACGATTTCCTGACCTTCACAAGTTTC ACGATTGAAAATCTCAATTCGAAAGATGAGGGAACCTACATTTGTCGTGA AGGGGATCAGTACGGACCAATCATTAAAAAATTTAGCCTTATTATCATGG GTAAGTATCGGGTAATATTTCATTATTGTATTCTGCATTATTACTTTAAA TAAATTGACCCAATATGGTGAAAAACTAGACTCTGGAAGCAACACCAAAN CTTCAAATAAATTGACCCAATATGGTGAAAAAACTAGACTCTGGAAGCAA CACCATAACAACATGTTAAATGCTGAACTCTaattaaattgttctttttt atttctcagAGGCACTTGAGACAACGGAGACTCCTGGCAACGGACGTAAG ACAACAATATTCATTTCTCCCTTTCTAACCTGACTTTTTCTAGTGAAGGa ttcgaaaatcttgaaaagtaAAACTAAATCATATGAAACAAGCTAGCAAC TAAGAAAAGTTCTGAATTTTGAAACCTGTCAGAATTCTTCGTTTTTCTGC AACCAACACTGAATTTTATTCATTGGGCATGACATTAAGATCCCTCTATG CACTGCTTTGTTATTGTTCTTTCAACTTTAGACTTTTTTAACGTTCGTAT TTCAGCTCCCGTTTGGTTGTATGTTCCCAAACGAATCGTCAGGGCAAACA GTAAGCAACTTTTTATAGCCAGATGTGCGGTAGCCGAACCGGAGGGTGTC AAAATCACCGTGTACCGATTGAGAGATGATAAGGAAATCTTAAAACAGTT CAAGGATCCTGCTGTTGTGTTGCACCGCCCAGATGTTGATGATGCAGGAT ATTATAAATGTGTGGCAGAAAATTCACAAGGAAGAATTGAATATCAATTT GAAGTCACTATTCGAGGTAAACGAAGACTTCACTTCAGTTATCTTGGTCC TAAATATAATAATGAACAACCAGGTTATCAGATATAGCACTTCACAAACC AATTAACTACatctcgttcgttcgttcgttcgttcgttcgttcgttcgtt cgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcg ttcgttcgttcgttcgttcagtAAACTCAAATCTCGGCTGAACTGCTATT CAATGAAAGTTACTTTactattttcttcattttcttcagtAAACGGACGT TATGGAAAATGGGAGGCCTGGGGCCCATGCGACAAAGAGTGTGGACTGGG CTTCAAAACAAGAAATCGCCAATGTGACAGTCCGGCACCTTCGGGCGGAG GGCGTGATTGTACGGGCGAAAGCTCCCAAAGGCTTTCGTGCAGATCAAGA TCTTGTCGTAAGttcaaaattatgtttttttctctcGATATAATAATCTT GAAAAAGGATGAAAGAACAAACAACTTTTCCACGCGAATAACTTAATCTG Tactttatttcaaaactttatatttttctatagagaaaccatttttgaag aaattcggATTCGAAATTACAAAAGAAGGGTTACACCTGTCTTGCAAAGC TTCGGGTAAGTTCTGAATCAATCTTAAATTCTTTAACAAAATTTCGCATT CCTGGAAGAGCTCTGACTGTGAACTTTCAAGTTTTTCTATCTTCACTAGA GACTTTGGCGCGATTAATCTGTTTTGTATCATAATTTTTGGGTTTGGGTT AAAGTTTTTGGAACTTGACTGACAAAAGATAGCATACTGATTGACTATCG GTTTTTTTAGGGATCCCGACGCCTTCTGTTCAATGGTATTTTAACGGCCG ACGATTTCCGATGTCTTACGATGCCCAAAATCCGGAATTCAAAATTCCAA AACCGAAAGCACGAAGTGGCTCGTACAGCTGCCGTATACGAAACCATGTT GGTTTTATGACTATGTATATAACCATCAAGGTTTGAAGAAACACACCTGT ATATAACCAACACGTCTTGGGAttaatttaatcaaaagaaGACTACTGTG ATGACCTGTCACATTGCAACCTGTACATAGcttattgttgatttttttgc GAGAACTTTAGTTTGTATACTTAAAAAATATGACTTAAACCGATCTTGAA GTTTTGATTATCAGTCTATTTGTAAAAACATGGAAAAACACGGAAAAAAG AATAATATTATGTGAATTTGTTTCCATGGGTCGAATTGTCATTATTAAAC GTTAATCCAGTCCCAACAAACTCTTGGACCTCCTACAGTGTATGACCCAT GACTATTAGAAAAAGAACTGACGAAACTTTTATTGATAGGCAATTTCAAC GGTTACGGAAATCGGGTAATAATCGCAATAACCAcaatcaaattttttac ttctaCAGTTCTTAGATGGTTTGGGGACAGTTTAGGAGCTTGGTTATAGT AAATTATTATATCATAATAACCTTATGGTTATGTGGTAGGTAGTCTTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00046582TCONS_00046582Clytia hemisphaericatranscript
TCONS_00046583TCONS_00046583Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00046582-proteinTCONS_00046582-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_114supercontigscaffold_114:27812..35660 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.12 0.09 0.09 0.09 0.31 0.4 37.07 37.25 35.53 22.16 28.33 49.68 138.97 170.94 25.23 40.65 13.85 15.66 300.57 423.79 15.6 15.26 4.43 7.58 7.31 7.33 1.21 1.04 17.93 19.67