XLOC_029865 (gene) - C. hemisphaerica

Overview
NameXLOC_029865
Unique NameXLOC_029865
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_117:388527..395069-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029865 ID=XLOC_029865|Name=XLOC_029865|organism=Clytia hemisphaerica|type=gene|length=6543bp|location=Sequence derived from alignment at scaffold_117:388527..395069- (Clytia hemisphaerica)
TTAGTATTGGGCCTTTTAAAAAGACTGAATATAACCCTGGTTGGTTGAAT TTGGTTTAATTGATTAAAATGGCTGATGCGCAATTTTGGAAAGAAGGGTT TTTACACAAAGCTGGTAAACACAGTTTTCAGGTAAGCTCAACTCAACTGA TTTTTCATAATTATCCTGATTTTAATTAGGGGTTTTATAAAACTAATTAC TATTTAAAAAACTCTTTAGGACAACAAACCTTTGACTCCTACGACAGAGG ACGAAAAGATTTGTAAAGGCAGGCTATTTAATGCAGTACAGTCTATTAAC TGGAACCTCTATACCTCTAATATCTTCTTAAAACTCGAAACAAGTTTTCT AGTCCCTTCCTTAAAGGTAACAATGCCATAAAAACCTTATATTTTTTTTA TTGTTCAATTTATTTAATCTTGGTCTTGCATAGTAATAATAAAACTCGAC TTAGTACTCTGTAACTCGAGTTCCCCATGCGTGTTCGAGCTACGGAGAAC TTCACTGTACTAACAATAATAACAAACTTTTCTTGGAGGATAAGCAATTG TGAATTTTATTTATTACAGTAGATAAAGAGGATATTTTTGAAAACTTTAA AAAACTTTTTTATAAAAAACCTTGAATGAGGCTTACAGTGCTGAAAAGTT CTAGAAGTACCTGCCTGTGATGGCCCCCAGCAGTTTGCGTGAATGCGTGA ATGGGCTTTTTGGGGTTCCTCTGTGATTCTTTCAAAGTTTAGTATTTATT ATTGGATTATTCAAGCATTTTTAAGAAACATAACATAAATAAGCCTCCTT GTCCTTAAAATGACATAAAAATATTTTTTTTATAGGGCTGGCGAAAAAGA TGGTTTGTTTTGAATTCTGATGCTTTGAAGTATTACAATCCTGGTCATGA GTATAACGTAGGTCACGTGATAAAAATCATATTTTTAGTTCTGTAACATA TCATTTATAAGGCCTTTTTTCAAAAAATTTAAATTTTGTCCTATCCCCAC CAATAGATGTGACCACCTTAATCAACACAACTTTCCACATTTTTTAGCCT GGATTTTTTTTATTCCTGACTTAGAGATTTTTCATGTTTTGTTAATTTAC GTAATTTCCACTATGGAAGCAAACGTTCGATTTGCGCAAGAATCGCCATA TCCACAGATTCGAACGTTTGCTTTCATAATGGCAGAAATTAGGTAAATTA ACAAAAACATGAAAAACCTAACCTGATTTATTTGTCAATTACAGGAATCA ACTCTTCTTGGTGTCATCCAGTTAATTGATGTGAGTATTATAATCAATCT TCTCAACTGTTTAACTATTCATTCATCTATTGTAAAATTAGACGTTTTAC TAGAACTTTTTGTCCGATAGAATCAGGTTTTTACCTTGAGAAAATTTAAA TATATGTTTTAAATTTGGTTAAGAGTTTCTTATGGCTCCTAGTACCACCA AAAAAAAACCTAAAATAGATACAATGACTAGATCTAGACCTACCGATACA GGACCGGTTTAATAATCCAAGAAAAATATGAATCTTATTTATTGACTTTT GTTTCAGATTCAGTCGTTTGTAGTGTTGAAATCACCAAAATATGCTTTTG AAATTGTCACAAAGTCAAGAACATACAGCATGGTAAGATTTTTAATTTCC GAATGAAGATTTTAATTCATTTTGCTGGTTTTTCAAACTTTTTGCTGTTT GGTATAAGACTATGTATAAAGGTCTGGAGGCACTTGAAACATTTTCATCA AATAGAAACATTTAAAAACTGAAACACGCCCCACCTATAAAAATCCGTTT CCGAAACAAAAAATGTTTCAAACAACCATCAACAGTTTCTGTCTAGACCC CCCCCAGGTGCTCTATACAATCCTCTATTTGCATGAACCTAGGCTTGGTT TTCACAAACAAACGATCCTGGTAGTTCTGTATGGTAACAAATTAAGACAA TATTTCATATAGCTCTGTGTGTTTATTTATTTTTGAAATCAAATAGGACA ATATTTCATACCAATATCCTTGTTACTTTTTTTAACAGTCAGCAAAATCG GAAATGGAAAGAGATGATTGGATGATCACTTTAAGAAAAGCATCTGACGA GAAAAGGTACATCCAGTGAAGGATGACTTTTATCTAACTACGATACGAGT TTTCTTAAGTTAGAACAAACAGATATTTTTTTTTGCAATCCATGAAATCT TCTATTTTCATCGTTTTTTAGTTATTTGTCAAAGTGAAAGCACGCAACAC TCTATTCTGAAGTAGATGACGTTTTTTATTCGATTTGAAAGAAAGTTTTG TTCATTTTCCTGGAAAATTCAATTTCAAGGTTATGGCCCTTTTCAAAAAT TTCCATCTCTTTCCCGATCTGTGAAGTTAAAACCCCCGCAAAAGATAAAG AAACCTCATCCGCGAAATCGAATTCCCGCTAAAATTTATCCAACTAATGT ATATTATGAGAACATAAGGCTACGATGGCCAAAATATCAAGAACAAGTTA AAAGTGTTTTTTTCCGATACCTGTCTCCAAATAGACGATATCGGCTTAAC ATGAAAACTCAAATTTGACCCCCCCCCCGAGAATTCCCCACAATGCTTTG CGCGTAAAAAATGTCACCGTGAACTTTTTTCCGTGCAAAGCATTGTGGGC AATTCTCGGGGGTCAAATCTGAGTTTTCATGTTAAGCCGATATCGTCTAT TGGTACGGACTGGAATTTGAATCTTTCCAATATTAATATACTCATGATAT TCATGACGTAATGTTTTATACGGATGAAGTAACCAAAAACGACCGGATGT TTGCCACAAAACAATAAAACTATTGGCGTACGCACGGGAGATTTTGGGTG CTTCCGCATAAAACATAATAACCGTTATAAATATCATCAATTAAAAATAA ACTCTAGAACCTTTTTTTTATTTTTCTAGAGGGATGACAACACAAAGACA AAGTACTGTTAGTTCTGTTTCAACTGGCTCAACAAACTCAAAAGCTGCAG AAGGTACTATACGTAAAAGATGTTATATTGATTTAAAAGCTTTTTAGTGT TACTTCGACCTAGATACCAATGATTTTTCTTTGTTTTACCAATAAGTGGC TTCTGTCTTTTTTCCTACAAAAAAAATCACCTGGGGGTCATGCAGTAACT ATGTGCACACTATGACACTTATTACGTGGTGGTGTGACAACTGAAAATCT TAAAAGCAGTTAATAGTCCACTGTTGTAGCACTCTCAGTATACTCTCAGG AAGATTTCGATTTCAGACAAATTGTTTTCAACCGCATAGAACATGTTATT GACAGGTTTTACATAGATGCAGAATTCTGCTCTTTTTCTGAAACAAAGAT AATCAAAGATTTAGAACAAAACGACATTGCGTTCAAAAATAATATCACGA ACTTGAGCCAAACCCAATCAAAATATAATACATAAGTGGAAAAATTACTC AGGAACAAGTGACGACATTTTTCGGCAACGCAAGTGACGGAGTTTTCCCC GGCTAGAGACTTTTCTAGTGAACTCCAAAAGAGAGATGTGTGTAAAAGAC CAAAAAAAGCATAGCAATATTCCAGAATTTTTTTCCAGAATTTTCTCAGT TCAATACACATCTATGGTTCAACGTATTTAAAAGGGTAGACTAGAGTTTA CTCTTGGTTTAACTTTGCTTTTTGATAATTTTTGACGGTGATGAAGTTTT CCAGTGATGAAAACTAGATGAAATCTTAGAATTTTTCACTTTCGTCAATC AAAGATATACAAACAACAAAACAATAAAATATATTCTCAACCCCAACAAA GTTTATGAAATTATAATAAAAACATAACAAATAACTCAAAAATATGTCAA TTGGTCATGTTTTTCTGTTTTTTTTTCTCCAANTCAAAGATATACAAACA ACAGAACAATAAAATATATTCTCAACCCCAACAAAGTTTATGAAATTATA ATAAAAACATAACAAATAACTCAAAAATATGTCAATTGGTCATGTTTTTC TGTTTTTTTTTCTCCAAAAAGGGGCTGAATCTAATGGATTTGATGTGTGC TCAAGCAATACCAAAAAATAAAGTCAACCATATTACACCTGGCAACTTTT ATCAGCGCACTTCAATCTATCAAAAAACAATACTTGACCCTCGGGCTGAT AAAAAACTGACTCGATCAATAACACTGATCCACTTCGTTCTAAACAATAT AATTTGAAACAAAAACTAAAGAATGATCTGAAAATGATAAATATAATACC TTTTCGTTTCAATTTCTTTACAAAATACATTACGATCCAACAAATTTAAA CCCTCTATTATATTTAGTTATACTGCTTCTAATGTGACACAAATAAGCAT CATATATGAAATTAGACACTACTTTCATTTTTGTTCTGAACTGCGTCTAC ATGTGCATACCAACAAACATTTCATGAAATTTCATGCAAGTTAAATAAAA GAAAAAAATGTTAATCTTTGTAGCTTGATTTTTGTGAGGTTTTATAATAA TTTGAATGTCAATCTATAGGAGTGTAATGTAATGTTTATGGTATACTCAC GTATTGCTTAAATATAATAGAAGGTTTAAATTTGTTGGATCGGGATGTCT TTTCTTAAGAAATTGAAACGAAAAGGTATTAAATTTATATTTAAACATAT GTCACTGCTGAGCCCTTTTCAGAAGATTTGACCTCTTGGAAAGTTAGTCT TAAAGAAGCTCCTGTGGCCCCAGTTTCGCTTCAAATACCTTCAAATTGTA CACCAATCGACGCAAAAGTTTCTGTGTCAAAAGTTATAACTCTTTGAAGT ACTGCCGGTATTACGAGTATACTCATAGTCGGCAGTGAATGTGTTAAGAA AGCTCTTTTCATAATTTATATCAGTGAGACATGGATAGTGAGACATCTGA TGAAAACTAAATACTTTAATGCTTTGATTCATTCGGGTATTAAAATCAAC ACAACATTCTTTTTGCCCGGAGCGAAGATTTTTCAGACTTCCCAAACTAG AATCATTTGACCAAGTGCATACGTTTTTGATTTTTTTTTCAGATAACAAT GTTTTCACGGAGAAGCCGAAAAAGAAATCGTCCAAAAAGTCAAAATCCAA AAGTTTGAAATCTACTTCACCGGAAGAAAATGTATACGCTTCGATACCGG AAGCGAATGATACTAACGGTAGCGAAAAACAACGGGCAAGCACAATCGCA GAAGAAAGTTTATCTTCTTCCACAAAGGAAAAAGTGGAACTTAAAAAACG GTCTAGCTCTGTTGCGGACACCCTGACACGGGCCAATTCCGCATTACGGA AAATGTCTACAGCAACGGAAGATGATACCGCGGTAGAGAGTATTTATCAA GAACTCGATCAAGAGCTTGACAATGAAGTAGATAGTGACGAAAGTGACAT TGAGGGCGTTGATGGGGCGCCAACGCCATGCACCACACCTGATCTCCCGC TACCAGTTGGCGGAAATCAAAAATACGCATTTACGGAAATGAAAGAGTTA TTTACTGACGAACAGATTAATGAAATGATGGACATTGATTTGAAGAAGCT TTCAAAACAAAATAAATTGAGTTTTGATGAGAAAGAAGAATTCCCAGCTT TCGCGCTGCTGAAAAGTTACGCTGCTAGTTTGAATAAATAATGCGAGAGG GAGGCTCTTCGTTGTTTTTAGTTTTCATCTAGTAAATATCATAGCTCGCA TCACCCTTCGCCCTGTATAAAAGGGGGCGGGGATAGAAATGTGCTGAAAA TCAGAGTTTTCCAGAAAAAGTGAAGTTTAAATAAATTAGTGAGGTTCATT CAACAGGGGGGGGGGCGGTTTTCTGCTTGAAGAAATCCCACAAATGTTGA CTTCCAAATGGAAAGGTTCCAGGATCAACAGGAATACCTCGATGCTGCCA CGGTGGTAACGCGCCCACAAAGAATTGAACCTAATCTTTCTAATTTTCTA ATTGTGAAGTTTTGACATCATTTTGAAATTCTAAAAATTTTCTTGCTTAA GAAAGCGAGGCGTTGATCTTGAGGAAGTGACCTACATTTTAATTAAGAGT TGCATCCTAAACAATTATGTCATGTTATGGCGAATTTCAGGGATAAATTT CAAATTGCCTAAACTTTGAGAAGGGCCCGTGGCGTTTTAGAACGCCATGG AAGGGTCATATATTTTTGTACTTAGATTTATAATATTTTGTAACACCAGA TAATTTATTTTTTTGCACTCATACTATACTTAGCATTTTTTTTATTTCAG CAAAACTTGTTATAGAGAAACGTTGACTTGTTCCCGGTTCTATAATTCGA TGTTTAAATCTTTCTTGTCGGCTTGGGCGACCATCAGCGCTTTCGGAGGG TGTATTTCGACCAAATTCAGGGACCCTCTTATGAAGAAAAGCTTAATAGG TTTCCGGGCTAATCTGTATCAATATAATTTTTGGCGCAGACAAAATAGGC TGTAACTTTTGATAGACTTCTAATTAGATAGCGATTTTGTGCTTATTGAA AAGATATTCGAGAGTGAACATTATAAAAGATATCCAATAAAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00046805TCONS_00046805Clytia hemisphaericatranscript
TCONS_00046804TCONS_00046804Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00046805-proteinTCONS_00046805-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_117supercontigscaffold_117:388527..395069 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.92 10.25 2.21 0.8 18.86 14.79 11.17 12.9 8.26 8.62 8.51 4.7 7.98 7.84 6.74 7.09 10.65 8.64 9.82 11.23 6.88 6.71 15.56 15.68 7.72 9.37 13.42 11.52 14.4 13.12