XLOC_029919 (gene) - C. hemisphaerica

Overview
NameXLOC_029919
Unique NameXLOC_029919
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_118:144301..147975+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029919 ID=XLOC_029919|Name=XLOC_029919|organism=Clytia hemisphaerica|type=gene|length=3675bp|location=Sequence derived from alignment at scaffold_118:144301..147975+ (Clytia hemisphaerica)
agTTTTCTTCAAGGTCTTTAATATACTTTGACTTACTTTTATCAGGCTTG
TCCGGAGAAGTGTGACAACCACGCGGCATGTGTGTTATatcaagctttcc
aaaaatgcatCAAAGACGATTGTAGTGATTGCAGCCTCAATATCAAATTT
GTCAACGAAACCGAACCCAATTGTGTTTATAATGATGATGGCTGTCTGAC
TGTTTTTAATTTCGAGAAGAATTTTGGTAGCGAAAACGAAACGGTCCTTG
TTGTCAAGGAAAGAAGTAAGCAATTTACTAAAACTCAGTATTGTCTTCGA
AAAACTTACAAAATTTACCCAAAACTCCTATTGCAATGGTTACAATAATA
GCTCTTATATCGAAGAATTCACAATCTAGTCCTACAAGTTATTTATTCAT
CAATATCATGGAGTGATTGATATTCACCCAACCTCCATATGTTTTTCTGT
TTAGAATGCAGTCAGAAATTGACGGAGGAGACAAAGATCTTGGTAATCGT
TTTGGGTACGATTGCTGGTATTGTTTTAGTtggtttgttgttgttgatca
TCTGGAAGCTGGTCGTCACTGGATTTGTAAGTTTGACCATTTGCTTTGTC
CCGATAAGTTCTTTCCTTTCCAGATATGTGGATTATGAAATCTTTAGGAA
GCTCAAACAAGACGAGCCCTTTCCCGCTTTGCTTATCACTTTTTAGAATG
CTCAAAATTAAAGATATCCTCATGGATATCACTTAGGTATTGATGTATTN
CTTATGGAACACTGAAGtcggtttgtcggttgtcggccagtggacaacag
ttatatttggaggacggtctaagatagataacaacatgaaagttactgat
aaaagcctaagcccataggaacatacctgctttagtttcttttgtctttg
aatggtataaaatttgagaaagtgcagaaaaaatcagccatcaaaacaaa
caaaaacaaaagttatgattatatcaacttttctgtggtagaaacacatt
tttttgagttggtgcacatacagaaattacactggatactaaaactaata
ttcagggagtgataagtacagttaaactacaaaaaatccatcaaaagaaN
CTAGGAAGCTCAAACAAGACGAGCCCTTTTCCGCTTTGCTTATCACTTTT
TAGAATgctcaaaataaagatatcctcATGGATATCACTTAGGTATGGAT
GTATTTGCTTGCTAATAATATCGGATAATTAGCGATCtagacagttagcc
taactcgtcagttaGACTGTTTACTCGTCACTACAAAAGTTCTTGGGTCA
GGGGTTTGGAGCTCGAGTCTCGAGCTTATCtgacccgatgtagaaatttt
cttccgacacgctaaagctctgaaggtcgggaaaattttNAGGGTGATTG
TGTTTATGCTCTATATCTATGGTACATCTAAATGGAGTTGGTTGTTCATT
AGGATCACTTTTAAGTATCTTAACCGACATCTGAAAGGGACAAAAAGTAT
TCCTGAATCTTTTGGTTGGTTTCTTCTCCAATATTGACTTGACATCTCTT
GTCTTTTCGTACCTTGTGTCGTGGTAGCATCTATAAAACACTCGCTCCGA
ATAGATACTCTTCTCAGTGTTCTTTTTTCGGGTCCTAATTTTCAAGGTTT
CACCTGTGTATTTTGAGTaggtttcaataaaattttttgagatCTGTGCT
GAAAGATATATCACATTTTATCTCAATATCAgtttcatgattttcatcac
aAGAAAATGTAACAATTTCGTACTTTGATTCgatttcctcaaaaatatcA
GCAATCAAATCCCTCTCCATGTTTACAAGAGTGCCATCATATTTTCATGT
GACTTATCacgaaaagaatttatttctcgaaatattaaaaatttattgCT
TGAACGGCAGTTTGGTGCGAAAAACTTTCATGCGGCAAAGAAAGGTATTC
GTCCGCTGGCTCAGATTTAGATTCTCAAATTTCTAAGTTttgcaggtctt
cggccgtttgtgtaggtcttcggccgctgaaaactgatcgcacattaaat
aagtaggtcttcggccgttagcgtaggtcttcggccgctggaaaaccgca
cattaaagttttaaaggtattcggccgctagcgtaggtcttcgttcgttg
acggaaaaaaaatccgCTACGGCGACCTCTATGAATTGAACGACGGCCTC
TGTGCTTCGGATTTTTGATCCCGACCCCCCCTGAtagtgggcggccgcca
atacgccatcggaatatcagataagtctCGAGCGCGCACAAAGTGAAATC
GTTCTAGAATATCTACAAAATTAGTTGAATTCTATATTCTACATTATATG
TCGATATTAAAGAGTGCTGTAATTCTACAGACGTCCGTAGAATTAAGAAC
ACTTATACATCTActtattttgtagattttctagTGAGACTGGCCTGTAT
ACAGTCACTATCTGGTTTATGACTGCATTTTAGATTATTTAGAAGAAATC
GTCTTTTTTTGAATGGCTGTTATTTCTAATCGTTTTTGCATTTCAGGACA
AATATGAATACCACAAGTTTGAAAATGACAGAATGAAATCGAAATGGGAA
AAGGTAAGAAATCAATCATGTCATTAAAGTGATGATAGAGGATCGACTGA
TTTTTGCATGAAACAGAGCTTGTAACTTGTTACAAAGGTTGCCGTAATTT
TCCTTCGCTATTTCTGAAAATGAACACCAGAACTTTATTCCTTTAAATTT
GATAATCCTTAGTTCTCCTGACTTCATTGTAATTATGATAATAGTTTTGT
GCTTATTCGAGTTTTTTGAGACGGTATTTTGAATTATTAAGTTTAACATC
AACGAGGAATATTTTGAATTACTAAGTTACCAACCTCGCATCCATCACAT
AGCGCCTATCGTATTTTTTTACCTCTATCTTGttatttcaggctgaaaat
ccCATTTACAAGGGTGCCAAACAAGAATATCAAAACCCAACCTACGCTGG
tcacaaataatttttttttgttaataatgtttttatatatattttggtat
ttttctaaaatctttgtgaatattttctctattgaatttttattatatCT
CTTATAAATTTTACCTTTCGTCTCTTTTATAATATGAAtattaatttaat
tttgataacGTTCAGGTTAGtagaattttctaatttttagaTGGGGATAA
ATTTAAACAGGAGACATAACAAGAAGGAGTTTGGCATGAAAACTTGATAA
AAACCCGATGTCACCAATATTTGTTACGCTTTAAGGCCGATTTGAGTTAT
TGCTCTTANGAATccttaaatttaattttattttgataacgTTCAGGTTA
GtagaattttctaatttttagaTGGGGATAAATTTAAACAGGAGACATAA
CAAGAAGGAGTTTGGCATGAAAACTTGATAAAAACCCGATGTCACCAATA
TTTGTTACGCTTTAAGGTGATCTTATAATGCTTTCACTTGTAATGTGTGG
TACAACGAGTATGATTAAATAGCTTTCTCCCTTTTGTACTCTTGGGTTAA
CTTATCTCATTACTGTCTAGATCAATACATACTTTCAAATTGTTTATAGA
ACTTTCTTATATTATGTAATTATATTCTTTCTACTTGTATTTTCCATACA
AAAGAATTCGAACTCGTTATAAAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00046892TCONS_00046892Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_118supercontigscaffold_118:144301..147975 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.28	3.53	1.49	1.66	11.16	9.83	15.96	16.26	15.46	16.09	15.1	12.63	25.91	24.38	14.82	20.33	29.57	47.22	32.77	39.83	33.56	35.64	22.38	24.62	32.78	30.8	63.16	73.35	147.27	178.03