XLOC_029920 (gene) - C. hemisphaerica

Overview
NameXLOC_029920
Unique NameXLOC_029920
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_118:156671..163289+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029920 ID=XLOC_029920|Name=XLOC_029920|organism=Clytia hemisphaerica|type=gene|length=6619bp|location=Sequence derived from alignment at scaffold_118:156671..163289+ (Clytia hemisphaerica)
tttaaatttcgagaaaattacttttaaagagagaaacttttttgtggcgc
acccggtataaacttctctcagggattacttagtcgatgtgttgtgtcaa
cttgtcagcattgtattgttgttaagggaaagataaaagaggtaagacta
gcctagtttcttaTCCTGATATAGAagtttaagcttagactgtGGTTTCC
TTTTTTCACTGAGCATAGAATTTAATTTAACAGAATAATTTGTAAAGATG
AAACTATCAAACAAGCACCTTGAAGCTCTTGAAGCAGATCATTTCCACCA
TCTTGGTTTCGATACACAGAGTGTTGACGTGAGGAAAAAATTCAGTGATG
TCAAggtaaattttttacaaaatgtatGTATGTTTTTGCTATTATTATAT
GTTGGATATATATATAACGCATATAAGGGTTCGTTAatgggcaggtctaa
aacgcctaatacctactacttaatacttactacctaatacttaatattta
atgtatatacctcaaaattgctcgaaaatacttttaaaataaTCAGCATG
CCCAATTCAACCTAAtctgaaaatttggtgttaaaaaaatttcaactttt
tgtcttatagcgttttgaagacatgaaaatatttgctctctttttttctc
ttcactttattttcccgcgctttttctataTAGTTTACAGACTACACAGA
TTTTGTCGAGACACACTTTTTCGTAGTAGAAAAATATTTCGTTTGCTGAT
TATtagctttatttataagaatcagtcgatctgaaaatttaaattaagtg
AGTATGCCCCTGTTTCATTGGGGCAAGTAACTGAAGTATATAGATTGCCG
AGAATATTTTGACATGACttgattttattacaaaccTGATTACAAATGAC
CCTTTCGAGCCAgaatattgacagggtcatttAATATGACCTTTTTAAAC
TTGATTATAGTAAGAATTATTAATGTGCTGAATAAGATGCTTTTTAAATA
TCACTAGATAGAAATTTCTAGTAGAAGTGAACTTTTGCCTATTATTGACC
ATCATCTAAATAACGTTTTAGCCCATTGGATCTTTATaaaggagacaggg
gtgtataagaataactgatttgaatatttacatatgttttcttataatta
gaTCAAAGTcgcaggaaaaagaaaaaactaagaTAATGACCTTTTGCTTT
GTACTTATATGGggcgaagaaaatatttactttaatgcaaatatttaaat
attcttttacaTAACATATTGAAAGACTTTAGGTAAATGTAAAGCAAAGA
CTTATGTGTTAGCATTCAAATTTCACGAAACTTAGAATAGAGATTTCGAA
CATGCGAAGGAGAGTCAGGGCCTggaagttctggtctgtaaagtatccaa
acggattaggtagtcagtattaagtattaagtagtaagtattaagtagta
ggtattaggcgttttagacctNATATAACGCATATAAGGGTTCGTTAATA
TGGTTTTTAATGGTCTGCACCAGGGGGCTCAGAGTGCGAAGCTCCTGAAA
GATTTTGATTATGTAGAAAATATTGGTTATTTCTGTTACAACAAAAAAAG
TTGGATTTTgctagaaataattttttctatttgaaTTTTAAGTTTCTGAA
ACTCACTCTTAGATCAAGAATTTTGGCCGGTATACAAACATAAAAAAGCT
ccgagaaaaatcttttttttttgcatttatttcAAGTTTGTTTGTGTTAG
TGGCAGCAGCAACAGAATTTCCAAATTTGCAAAGTTCATCAATAGCCAAC
TTCAAGTACTGAAAGATGAGGACATTGTCAATCTATGCACTGGTGATCGC
TATGTCATGTATAAAGTTGGTCCTGTTTTGATGGCTAATGTAAGCCCAGT
TTCTGTTGTTTTAAAGATTACCCCACCTGCACATACATTTGCATGACATC
ATTAGATTTCAATTACTTTTCTCATACAGGTTTTTATAGgcataatcgca
cgatgagttattttttctcatttggcgccctttcaaagagagcaattaat
cgttaattgcatcctgtagagagcaattaatcattaatcacactcttcat
cGACgggccaatgtttacaaaatagattttaatgttttttcttacatttt
tattATCGAACggtttaattgcattcgaaatttattttgtgagaaagaaa
atctgtaagcaacaatgaaagaaaaaaaataaagagaagagaaaaatata
aaacagttCAGTATATTTTTCTTCCNaaaagaaaaaaaataatgagaaga
gaaaaatataaaacagttCAGTCTATTTTTCTTCCTGACGGGGAAAAAGC
AGTGAAACCAATTGTGCGATtagtatggcgcgccaaagcggaaataaata
ctatctctttaaaacaatactatcttcgtttaaaacatactatcttttta
aaaaaatactattttcgattaaaacatactattttcgttcaaaaaatact
attttcgttcaaaaaatactattttcgttgaaaaaatgctatttccgttt
gaaaaaaactattctcgtttaaaacatactatcttcgtttaaaaacatac
tatcttttgtaatgatactatctttttttaaacaatactatctattTTAA
AACGATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatactatgttt
taaacgaaaatagtattttttaagcaaaaaatagtatgttttaaaaaaga
tagtatgttttaaacgaagatagtatgtttacaacaaagatggtatgttt
taaacgaagatagtatttttacaacaaagatagtatgttttaaacgaaga
tagtattgttttaaaaagatagtatttatttccgctttggcgcgccatag
attagctcgtaatcacataataactcgtacaattcgaaaattgcactcgt
gatttttttgtttcgaattttcctcgtcctttcggactcggaaaattaat
aaaaaaaaaatcgctcgtgcaattattctcgaattccactcgttatcatg
tgattacatatactaattcttATAGATCCATCAAGGCTAAATTGTTTTGT
CATTGAAtggattaaaaaattgaaatctgcTAATACCAGAATCAATTAAC
TTACcagaattattattattttctctTTGCAGCATGGCATGGGCGTCCCC
TCAACAAGCATTTTGATGCACGAACTATTCAAACTATTACATTATGCTGG
TGCAGAGGATGTTGCTTTCTTTAGGATCGGAACATCTGGAGGATTAGGTA
TTCATGCCTGTTGTGTATATATTCTCCTTCTATTGGATAAATTATTTAAC
TCGTAGCAAGGAGATCTTTTTGAAGAAATAATATGATTTCAATGTTTGCT
ATTTGTTTTTGAACTCTTAGGTTTGACACCTGGAACAGTTGTTATCACAA
ATCGTGCCCTGAATGCATAtgctgagccaaaatttacacAGGTTTGTTGC
ATGTCATTATATTTGAAGACCAGATTCAAGTTTTCAATACAATTAATCAA
GGATGTGAAGATGTATATATAATACCTGGACGTAAAAGTGCTTtttgaag
ctgaaatttttaaatgtttcGAATGACGTGATGACTACTCTTATTCTTCA
GGTAGTGCTTGGGAAAACTGTGGAGCAAGATGCATCATTTTTGAACAGTA
TATCAGATGAGTTGATGTCGTTGACGCGTGATAGCGAAGAGAAAGTCTTG
TTCGAAGTGGTCATTGGAGATACCATGTGCTGTGATGACTTCTATGAAGG
TTTGTCACAATTATGGTGTGGGGGAGGGTTATGTGGGAAGATAGATGTTA
TCTgcagagaaatttcaaaaaaaatcgctTTTAGTTCTTTTAGTTTATTG
ATCTGCTTGAACCATTTATCAAGGCTCGATATCATTTGAAGGGCTATTAA
ATAGTATTCAGTGAATTTAATTGGACGCTACCAATTCTTGTCAAAATGTA
TATTTCTCCTTATTTATGACGTAGGCAAGGGAGATTAGAAACATTGTTTT
TTGTTATGTCTAGTATAAAGTGTTTGCAACAAGATAAAAAATCTGTCATA
AGATGATATCAATATGGTTTTAAAGGATCAGCCAATTATGATTTGATACA
TCAATTGCCTTATGTAACCTTTGGTTTAACTaaagttcaaaagttataaa
cGATTATCTTACCAAACTTGCTTAAAAGATAACGCGATGCGCACACTGTT
TTTCATAAAGTTCTCAGTGTTTGGGATCGCACCGTCAGTACACTACAGTA
TAATAAAGTTAGATTTTTATTAAAGTAGTTTACCGTTATGtatcttaacc
ctttaagtgccacggtaaTTTATTTCtaagctttttaaagaaaatcgctt
gTTCAAACTTTagaggcttatatctccggatctaaaaggaattagaagct
cgtttatagtccgTTGGATAGCTCAGAGTCACCTCTTTCTTTTAGGTGCC
TTCGAAAGCAGTCAGGTCCGCTgcgcttcgccctcctataaagcctatgt
ctgatatatacgacattggcacttaaagggttaagggaagaaaatttggc
gggtTTGGCCAAATTGGACTTTTCCCGCCATCCTTCGTCCGTCAAATTag
attccctctgaaaaaactttttccccCATCCGCCAAATAATTTCCCGCCA
AAATGTCTTCCCTTGAggtgataaaatttttctttactaaGAAGTTAATT
CCctgggaaaatattttcattccaCTTTGTTTCGAGTCACGTGATCCGTC
GTTTATCCATGCTTTCGTATAATGCTATTCCCCAACATAAAGGACAAGCG
AGGCTGGATGGAGCTTTTTGCAACTATACTGAAGAAGATAAGATGGGATA
CTTGAAGGAACTTCACCAAAAAGGTGTTCGTAATATCGAAATGGAATCCA
CCCTTTTCGCGTCGCTTTGCAATCGAGCTGGTATCAAAGCAAGTGTTGTT
TGTGTGGCCTTGTTGGATCGGTTGCTAGGTGACCAAGTAAACATCACCAA
GGAGATGAAAACAGAGTTCGAACAACGCCCTTGGTGGGTAGTTTTGAAGT
ATATTAAAAAACACATCTCAAAGTAAATGTGTACAACGTTAATATTGACT
TACAGtatcaaattaggtatttttaaagtattttgcAGTTTCCGAATGGC
ATTTGAATTTTTAtacgtttttataagcattcaGTATCCTAGCGCTTTCA
ACAAAGGTATACGATGGGGAGATAGGAATGAAGAGAATTCTCATTGCAAA
GATTCTATTATAATACTGCATTTAAGAGAATTAGGCCAAAATTGGAAAGC
CATAAGCCTTTTTATTAATGTCCAAGTCTGTCTTAAAATTCTTGAAGATT
ACTAAGCTAATTGTCTGGCTATAGTTTTAAAAAGGCAGGCTTTAGATTAA
GGCTCGTCTAGAAAAAAGCTGATACGGTTTACTTCCCAGCAGGAACCCCT
AATAATATATGACGAATTTTATTGCCCTTTTTGTTcagttattttgtatt
tatcgtTTTccgaaattgttttttttttttttttttactttgtattGTTT
ATTAAAGCATTTGGGAGATTCTTTATGAGTTGGTATCGTTCGCATATTTC
CCTTGATACGCTTTTTAATCCTCTTTTGATGATAAGGAATCATtccgttt
tgaatttttgttgatTATATTTTGTTTAGTTTTATTAATATTTGATAGAA
AAGGCTTTATTATCAGACTTTTGaagtcatttattttttaatgaaatctt
ATTTTGATGTTGTACTATTTATATTATTTGTGATCAGACAAACTGTCAAA
AGAATTAGTATTTAGTGAAATGTACATCAAGACTCGCTCTATCCCCGCCC
CCTTCTTACGTTTCTTGTCACTCCGAACTTTGTCCAGTAAGGTTGAAACA
GTCTATACCAATAGTTTTTTGAGAGGGGTTTTTTTGCTAAGGCCtaggaa
tatttttttaggactcaAAAACTGAGGTCACAAGCAAAACCCCTCATCCC
CTaaaatttgacgaaattt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00046893TCONS_00046893Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00046893-proteinTCONS_00046893-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_118supercontigscaffold_118:156671..163289 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
UPP1uridine phosphorylase 1 isoform a Homo Sapiens
UPP2uridine phosphorylase 2 isoform b Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
16.01	13.89	3.49	1.57	7.5	4.81	7.64	8.22	10.27	14.29	9.57	6.12	12.61	9.12	15.11	15.62	28.93	27.17	57.5	81.6	11.93	12.27	24.93	24.55	9.11	9.85	46.62	26.96	25.15	18.93