XLOC_029972 (gene) - C. hemisphaerica

Overview
NameXLOC_029972
Unique NameXLOC_029972
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_119:74254..79019-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029972 ID=XLOC_029972|Name=XLOC_029972|organism=Clytia hemisphaerica|type=gene|length=4766bp|location=Sequence derived from alignment at scaffold_119:74254..79019- (Clytia hemisphaerica)
GTCTAGACAACTACTTTAATTTTAATTCTTGTTTCTTCTTGTAATTATAG AGATGCTGGCGACACGAGGGTGCATGAACTAAATAAAAAGATTCGCACAA AAACGAGTAAGTCCCTGCAATTATCACAACACTATTGGTATTGAACATCT TGTCATTATAGAGATGCTGGCGACACGAGGGTGCATGAACTAAATAAAAA GATTCGCACAAAAACGAGTAAGTCCCTGCAATTATCACAACACTATTGGT ATTGAACATCTTGTCATTATAGAGATGCTGGCGACACGAGGGTGCATGAA CTAAATAAAAAGATTCGCACAAAAACGAGTAAGTCCCTGCAATTATCACA ACACTATTGGTATTGAACATCTTGTCATTATAGAGATGCTGGCGACACGA GGGTGCATGAACTAAATAAAAAGATTCGCACAAAAACGAGTAAGTCCCTG CAATTATCACAACACTATTGGTATTGAACATCTTGTCATTATAGAGATGC TGGCGACACAAGGGTGCATGAACTGAATAAAAAGATTCGCGCCAATGACG AGTAAGCCCCTGAAATTATCACAACATATGGTCCGACAGAGGCACGAAGA GAGAAGGTTTTCGGATCAGCTGCAAGAGAAATGAAAATGTAGACCAAACA AGCAACATGCTGAATGGACCTACCTGTTGATCAAAATCAGATAAAAAAGG ACAAATATCAACAGAGTAAGAAAGTGTAGGAAGCAGCTTAGATTACCATG AGATTAACTGTGAAGTATAGTTAAGGTGGTATGACTTATAATCGTAGATA CTGGAGTGAATAAATATTTTGCCGTGGTTTCCCTATTGACGATAAAGAGT GATTTTCACCAAAGTCCGAAAAAACCCATTTTAGTTTCTGGCCCAAATTT GCCCATTTTATATCACTATGCAAAAAACAAGAGAAAATACCAAGCCGATC ACGAAAAATGCTCAATTTCCCTAAATATGACAAAAGGGAATTTCCCTAAA TAAGAAAACCTGATTCTTACGGCCAAAAAAAATTTCCAGAAAAAATAACT TGAGCCACTTTTTGGAGAACCTTAATTTCTATCTTGCCTAAAAAATTAGA AAAAATCTAACGAAGCAAATGCACACAAAGTAAAAAAAAAACCCATTTTT AGACACATTGGCCCAAATTTGCCCAAAAAAATTATTATTTGAAAATTGGG CTTCAGATTTTAAATATTACCATTTCACATCAAAGTGTTAAAAATCAGAA AAAATATCAATCCAATCGCAAGAAATGCAAGAAATGATCTCTTTTCCCTA AAAATGACATATGGGAATTTCCCCAAATAAGAAAATCCGATTTTTAGCCC AAATTTGCCCCAAATTTTATTTTTCGAAAATCGGGCCTCGTCACTTTTTG GGAATCACCATTTTGCATCACTGTGCAAAAAATCGAAAAAAATAATGAGC CGATCCTGAGAAAAGCTTGTAACAGACGAACGGAAAACGGTCAAATTGAA GGACGGCAGGTCCAAAAAGTCAAAGAAGATCCTTGGAATTCTCACAACAT TATTGATCTTAAACTTCTTGTCTCTATAGAGATGCTGGCGACACAAGGGT GCACGAACTGAATAAAAAGATTCGCGCCAATGACGAGTAAGTCCCTGAAA TTCTCACAACATATGGTCCGACAGAGGCACGAAGAGAGAAGGTTTTCGGA TCAGCTGCAAGAAAGATTTTGCGAAAATGAAGACCAAAAAAAATCAAAGA CGAGTGAGTCCCTGGAATTCGCACAACATTATTGACCTTGAACTTCTTGT CATTATAGAGATGCTAGAGACAAAGTTAAACGGACTAAACAAAAAACTTC GCGCCAAAAACGAGATGCTAGAGACGAAGTTAAACGAACTAAACGAAAAA CTTCGCGCCAAAAACGAGATGCTAGAGACAAAGTTAAACGAACTAAACAT AAAACTTCGCGCCAAAAACGAGATGCTAGAGACAAAGTTAAACGAACTAA ACAAAAAAACTTCACACCAAAAACGATTAAGTCCCTGAAATTCGCACAAC ATTGAACTTCTTGTCATTATAGAGATGCTAGCGACACGGGTGCATGAGAT TAATAAAAAACTTCGCGCCAAAAACGAGTAAGTCCCTGAAATTCTCACGA CAAATGTCATTCAACAATTACTACAATACGGGTGTAGTTTTGCGGCTTAA AAATTGATTTATGTGCTTCTTTCCCAAACAATCAAAATATAGGACGGAAA TTCAAATCAGATGAAGAAGAAAATCAATGTTAAAGTCAGATTCTAAATAT TTCAATGCGACCCTAATAAACCATATCAAAAGGTAACAGCTCGCTGGAAA GATGTTTCCGAGTGGATGAATTGAGCAGAATTTCCTGCTATAGAGATTTT TCTTAAAACAACTCTTTTAGGATCAGGCGTATTGAAAGTGCTATCTAGCC TCATGTCAAGGACAATAAAGATTCTATGGGAATGGTGTTTTTTATTTTCA GTGCACTGGAGGGTATGGACGAAGTGAAAGAAACGATAAGATTTGTTCTG AAAGTAGTAAATAGTAATTTGGCTTTTAAAAGGGGGGTTGATATGATATG GATTGAATTGGAGAGCAGTTTTTCTTGGGAAAAATTTTTCCAAAAGCAAG AAAAAAACAAATTTGTGATTTCAATTTAATATTGCCTTTTAGAGCTTCCG ATGAAAACTCCGAAAAGACATCCCTCGTAAACGTGAACTTGTGGCAAAGC TCTCCAAAGAAAAGGCTTTTGGTACAAGTATGATAGATGAACATGATCTT CATAGAAGGACTCTGTGCAAACATTCTATCACAAGACTTCACATAATGAC GTTGTTAAGCTTATAAAATCTTTATTATTAATCGGAAAAATTACGTTGCG GTTGGTTGGCCTAACCAACATTTTCTGAAAATGGTCAAAGACTTTGCATG TCCATTATTAGATTTGACTCAGACTCTTAGTGAGAAAAACAATCGTTTAT TAATTAACTTTTTAACTTCTTTATCTAGCATGAGGCTCTAAAATTTCAGC TTAGAGCAGACGTTGATGCAACTTGATCTTCTACATTTTTTTAGTTTTCT CCATATAAACACTCTTGTTCTAAGTTCTAAGATTTCACTTTCATTATTTT GACTGTTACTACGAAGGTGGAGCCAATGAATTTCTAATTATTACCATTTT ACTTTAAATGGAAAATTTATTACAACGAGAAATACTCAATCAAATCGATC AAAACTTTTATTCAAAATTCTATTTTTTAGCCTGAAAACACAGCCCCAAT CGTCGAGGAGGCGGAAAATGAAGAACTCAGAGAGCAGATTGATCAAGCAA TCATTGATCTTCAAATTGAGAATGATAAATAATACGAACAAGAAGAAGTA GGACAGGGGGGGGTACCAAGTCAGTGTACTGGACCATAGGGTACGGGTAC TAACTTGATTTTTGGATTTGTTTTCCAAAAAATTAGACCACCACCCTACT AACTTTTTTTCATGGTCGGGGCTTTGACACCACCCTTTTAGTACACTGTA CTAACTTTTTTTCACGGTCGGGGCTTTGACACCACCCTTTTAGTACACTG TACTAACTTTTTTTCACGGTCGGGGCTTTGACACCACCCTTTTATTACAC TGTACTAACTTTTTTTCACAGCCGGAGCTTTGATACCACCCTTTGAGTAC ACTGTACTGATGTTTTTCCACAACTAGATTTTTATTACCACCCTTTCAGT ACACTGTAGTGACTTCTCCATGACCGGATTTTTGATACCACCCTTTTAGT ACACTGTATTAGCTGTTTTTTCGATCAGATGATTTTAGAAACCACCCTTT ATAGTGCACTGTTCTAATTTCTTTTTGGCCAGATAAGTTTAATTGCCACC ACTTCAGGTAAGTGACCTACCGGATGTGCGGCCCTTAAGGGTAGGTTTTT GGACTTTGGAAAGTGCACTGTAAGGGTTGATTTGTGAGAAAGTGGGAAAA AGTGCACTGTAAGGGTGTAAAATTTTATAAAAAAATTCGAAAAATTACAC TATAAGGGTCGATTTTCAGCCAAATTTTTCCTGCACTGCAAGGGACCAAT TTTAGAGACCTGATTTTTGCCCGAACGTGTGCAGTCGTTTTCACCCCTCC CCCCGGTGATTTCACTTATATACAGATTTTTTTCAATTAACAATCCAACA AGGTTACTAAAAAACATAAAACAATAGAGCGGGTTTGTTTTTATAAAACT TGAAAGCTTCGATTCGAACGTTTACACATTTCAAATTCTTGTTGTTGCCA TAATGAGATAGGGCCTTAAAGAAAACATAAACAAGATTGGACTTAAGGCC GGTCTCCAATTGCGCATGCTGCAACTCTGAAACAAATCCAATCAAGTAAA CAGGAAACATTGGGAGAAAATCAGTGTACAATTTGTATAGCTTAACCAGC CTTGACTTGAAGGTCTCGTGACCAGCTTGGACCAAATTAGGGCAAATATA CATGGGAATTCACTGGGTTTGTGTTTGTACCACTGAAATTAGTACAATGT ACTAACTTCTCAGTGTGTATCAATTCAGAACACCACCCTTTTTAGTACAG TGTACTAACTTTTTCATTGTATTTTTCACAGAGGACCACCCTTTTAGTAC ACTGTACTAACTTTTTCATTGTATTTTTCTCAGAGGACCACCCTTGTACA CTGTACTAACTCAATTTAACCTAAAAAATGCACCCACCAGCTATGGGCCA GTACACTGACTCGATA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00046982TCONS_00046982Clytia hemisphaericatranscript
TCONS_00046981TCONS_00046981Clytia hemisphaericatranscript
TCONS_00046980TCONS_00046980Clytia hemisphaericatranscript
TCONS_00046979TCONS_00046979Clytia hemisphaericatranscript
TCONS_00046978TCONS_00046978Clytia hemisphaericatranscript
TCONS_00046977TCONS_00046977Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00046977-proteinTCONS_00046977-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_119supercontigscaffold_119:74254..79019 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.55 1.76 2.47 2.29 7.27 4.58 6.37 8.05 3.11 4.07 3.73 3.23 2.94 2.98 2.08 2.26 2.05 2.39 1.88 2.78 3.64 3.34 2.05 2.03 4.58 7.63 6.35 6.37 4.45 3.98