XLOC_030028 (gene) - C. hemisphaerica

Overview
NameXLOC_030028
Unique NameXLOC_030028
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_121:488..10037+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030028 ID=XLOC_030028|Name=XLOC_030028|organism=Clytia hemisphaerica|type=gene|length=9550bp|location=Sequence derived from alignment at scaffold_121:488..10037+ (Clytia hemisphaerica)
tttagaaacaacaagaaaaaaaatgtacaatAATGTGAAAAAcataataa gaaattatgtcACTCCTGACATGATTGGAAAACCATATCTCCTGGCAGAA ACTTCTTTACGTACAACTGATTGgggaaaagattttcaaattcttgACAA TTATTATCATGATGACAGCTCACAAATTGATGTAAATGAAATTGCTAAGG ATATCTATTTGGTTGAAAATGTATTGACTCAATTCCAATGTGCAACAATC ATtgataaagcaaaaaaattgaatctaCAATATTGTTGTTATGGCGAAGA AAGAAATAActctcgtttagttttgtttgatGAGAAATTTGCTGATTTTC TTTGGGATAatatttctgagaaatttgaaacacAAATACAAGATTCTAAA ATTCATCCATTTGGTTTCGATGCTGCTAGAGGCAATTGGGAGATATTTGG TGTCAATGAAGCAATGCGTCTGAACAGATACAGTGGAAAAAGAAAGGAGT TTTTTGCTCCCCACAGAGATGCTCCATTTTGTCCCAATGGTGACAAAAGA TCCTTGTATACTATGCTCATTTATTTGAATGATGATTTTGAAGGAGGTCA GACAAAATTTTACACACCAAAAGACCCCTCTATTGACACCAAAGGTTTAA CAATCAAAGAGGAAATAGAAAAGCATGGAAGTTTGGAAGGCAGTTTCGAC AGCTTCACTGTGTCTCCAAAAGCAGGAAGTGTTGttatcttcaaacagaa tcttaTTCACGAGGGATGCAAACTTTCAGGAGATGGTAAATATAAGTTTG TAATTAAAACTGATATTTTGGTTGAGCGTGTCAGCAAAAAACTTGGATTC TGCCCTCCCAAGGAAGAATTTGATGACTATCAGAACTGTTTACAGTTATT TCGTCAAGCCCAACAACATGAGATGAGGGGGCAGAACCAAGAAGCAAATG AATGCTATGAGAAAAGCTTATCATTTCGTTATTATTATCCATCATCTTTA TTGATTAGTAATTCCGATGAACTAAACAAAGCTAGCACTGATGATCCCAA TACATTTGATTCCCAGATAAGTATGACGTCAACTTCCTCCATTCCTTCTC GGTCCAACCCATTTACCATCTTTCCTCAAAATATTTGGAACAGAATAATG GTTTTGGTACAAAATGATAAATCAATTCACAGTTTGTGTGAACTTTTCCC CTTGTTGAATATTGAGAAGAGAAGGATTCTTTTTCAAAGAGTCGCACCAA TGGTTGATCATCACAGTGGTATTTACACTAAGTTCTCGTATGATAATGGG CATTTCGTAAATGGCTGCCTTGAAAACTGTATTAAAGTTTGTGCTGTTTA TTCCATGTGCCTGCTTGGTAATACACCAAAAGATTCACACTATTTGGTGA ATTATGACAGAGAAACAAGGAATGCAACAACTGTTCAGTTAAGAGATCTT CTTTATGGTGTGTTTGCCAATGAACCTGTCCAAGGAACTATTTTCTCTGT TGCTCGgagagaaaaagacaaaaaaccCAATACTGATTTGTACCATAGTG TTGATAGGAAATTCATGTCAACACATTTTGATCGAGATGATATTGGTATT GATATAGAATCTGAGATCAGATcaagtttgaagttttttgaTCTTGATAG TGATGAAGAAGATAAAGATGAAGAAttaattgaaaatgaagaattaattg aaaatgaagacgaGGAAAAGCAAGTAAACATAACGAATGTAAAGGATGTT GATGTTAAGGTTGAAGAAATCGGTGTTTCCCAAGAAAACAATGAGTTTGA CTCTGAATCTGATTCAATGAGTGATAATAGTAGCTCCACTGATTCTGAAA GTGATGATGAACCTGAGCTCACAGAAAGAGATATTTGGAACTTTTGTCGT GACAAACAATACTACTTGAAAGATTATTACAGTAGGTATTACCTTGGAAC ATTTGATACTCATTATGAATATTGCAAAAATGAATTACCGTACCAAGAAA AAGGAGATCCATATGATCTGAATGCTTGTAATTTTGATATTGTTAATGAA CCTGAAGATCAATGGCACGAGTTCTTTAGTGGTTATGCGTCAATGGAGTC TCCTGATTATTACCCTATTTACGTACCATCTTCCTATTCCGGCCCTGGTG CAGCAATTATTCGCAAAACCAATGCACCAGTCATAATGGATGATAGAGAA ATCTGTATTTGTAATTTCAAAGCAGTGGGTGGTTCATTAAGTAAAAATTG TTCTACACACACCTTCAATCATGTTATTGCTGATTTCAGTAAGATAAAGC TTGTAATCGAAAACGAAATTGCCTATGCTTATGGTACTCCTGACCAAAAA AGCATGGCATCTCTTTTGAAATGGGTGAAACATTTTGCTGAGGATTTGTT CGACTTTGAAATGTATAAAGTCAATATCAATGAAATGGAAGACGTATTAT CATCATTCAATCATGCAGCATGCCAATGTTTATTTCCAAGATATCGCATC GATGATTATGTCAATTTATCAAGCTATCCTATGTTGGATACTATTGTTGT AATTGTGGCAAAGAACAAAATCGATCCAGGTGAAGTTCATATTTACACTG GCTATGCTGGTATTGCAGCTCTTTGAGCACATTAATATACTATTATTAAG CTATTGTTAAATTTGAATGATAGGCGCgtctttttttggaattgactcCA TTAAGGGGTAGAAGTGTTTTTCTCTCGAAAAACTATGTAGAAGACTTTTA AGCAAGTATGGCCAATTTCTGTACTGAACGAGAGTTATTTGATGTAGAAG TGTCATTTTATAAGCGATTTATGACCAAAACGAGGGGGAAACCACCACTT CTTCATCAAATAACTCCCGTTCAGTACAGAAATCGATCATACTtgcttaa aagtcttctatatagtttttctaTATAGCTTTTCTAGAGAGCTTTCAGAT TCTATAATTtgttttggcctaaaatgagtttgaaatttccatatAAATTG GGCCCTTTGGCTTTAGCCTAGGTTTTCATAAATgagcccaaaaataaggg cGACCCTTAGAATTTTTCTGGGCCGCCCTTCTGATATCAATCCATAGGGT ATTAGGTCCAAATTTGTtgctttgttccaaatttgcacggtaattacacc aatcaggccTACTATTTCCTTAGTTTGTGAAGCACCATACAGTACCATAG TAGGAAGTGtgctgaaattttgaaaataattttaaaccacTTGAAAAGCT TCACAaacaaaaatcatgaaaaagtagATGATGTCAGTCCTTGATAACAA TTATTATTTAGCTTCTAAACAATTGTGGTTTTGATAAGTATTAATgttac aatatttttttttcacgtaATGTTCTATATAGAGATTATTTTTATAGTCA TAAAGTTATAGAAAATGTTTTCGTGTGCTTTATTTCCTTTCCCTGAATAC GAGCCTTGTGAAAAAGGATGCATGGTCTCGAGGTActattttaactttta ttttttctacaAGAGAGAATTTGAATGTCTTTGGGTCTTTTTTAATAatg tatatttatattttagatAGAAGAAACCAAAATGTACAACAATGTGAAAA ACATAATAAGAAATAACATCACGCCTGACATGATTGGAAAACCATATCTC CTGGCAGAAACTTCTTTACGTACAACTGATTGGGGAAAAGATTTTCGATT TCTTGATGACAAGATGGCAGATGTTAAACCAGACatagaaattgacaaaa attgcaAATGATATTTATTTGGTGAAGAATTTGTTGACTGAACCTCAATG CAAAGAAATTATTGGTAAAGCTGAAAATCTAAACTTGCAGTTATGTTGCT ATGATGAAACAAGAAAGAATTCTCGATTAGTTTTATTTGATGAAGAATTT GCAGATTTTCTTTGGGATAATATTTCCAACCAATTTGAAAAGCAAATCGG AGATGCTCGTATTCATCCATTTGGCTTTGATGCAGCTAGGGGCCATTGGA AGTTATCTTGTGTCAATCAAGCAATGCGCCTGAGTGAATAGatatggcgg aaaaaagaaagaattttttgctCCTCATAGAGATGCTTCATTTTGTCCCA ATGGTCACAAAAGATCGTTGTATACTATGCTCATCTATTTGAATGATGGT TTTCGTGGCGGTCAGACAAAATTTTATGTTCCAAAAGACACAACAATTGT CACTAAAGGCTGCACTATAAAGGAGGAGGTAAAAGAGAAGTTTATGTTCA GGATATGACTGCCATATTATTGCACCAAAGACAGGGCAAGCAgttatttt caaacaaaatctgATTCATGAAGGATGCAAGCTTTCACCAAAGAGTTACA AGTTTGTAATCAAAACTGATATTATGACTGAGCGGGTTGGAAAAAAGCTT GGATTCTGCCCTCCTaaggaaaaatttgatgataaTAAGAAGTGTTTGCA ATTATTTCGCCAAGCACAACAATTTGAATTGGGACGTAATTATGATAAAG CTAACGAGTGTTATGAACGAAGTCTCTCTTTGAGGTATTGCTACCCTCAG AATCTTGATGGTGGTATTTATCAAAAAGGAGAACAATTATTGACTGACAA TGTTGCAGAATCGCAAGAATCTTTACCTTGCTCTCAAATATCAACTCTCT CCACCTCATCAAATACAAATCCTTTCTACATTTTTTCTCAAGAGGTGTGG CATAAAATTATGGTCTACCTGCAACATGACAAAGCTTTACAAAGCCTTTg tgaagttttttcttttttaagctcAGAGCGAAGGAAGATTTTGTCCAATC AATTTGTGCCAAAGGTTGACCATCATAGtggaattttcaccaaattccCA TTTCAAAATGGAAAGTTTGTTTCTGAAAATCTAGAAAGGTGTATTAAAGT TTCAGCAGTTTATTCAATGTGTTTACTTGGTAATGAGCAAAGAAATTCGC ATTATTTGGTGAATTATGATAGAGAAACTAGAAATGCTACTACAGCCCAA TTGAAAGATCTTCTTTATGGGGTGTTTGCTGAGGAACCTGTCCAAggaac attcttcaaagtagctCAAAGAAAAGCTAACAAGAATCCGAATGAAGATT TGTACCATAGTGTTGATAGGAAATTCATGTCAACACATTTTGATCGAGAT GATATTGGTATTGatttaaaatctgaaattaGATCACATCTCACGATATA TGATAAGGACAGTGATGATGAAGAGTACAGCGATTCTGAGGAAAGTGACC GAGAAGGAAAAACTGATGAATTCACGAAGAAAGATTTCTACAATAATGCC AAAGATAAACCATATCCTATAAAAGATTTTCACAATCGTATAACCTTAGA TGGTTTTGACCACTATTACCGATATTGTAGAAATAAGTTTCCACCTAAGT CAGCTGACGAGGCTGATTATTATAAATCATCTGCTTGTTTATATGATTGT ATTACGTACCCAGAAGATCAACGAAACGAACTACTGGAAAAATTAGTCCC TGAAGACCATTACAACTATCATGTAACCAGGATGAATGTTCCTACCTCAT TAGAACCAAGTTGTGCAATCTTCCGAAAACTAAATAAACCAATTGATGAT ATGAGAGGAGAGAGCTGTGTTTGTGTTTTTGCAGATGTTGGTAGTAGATT GACTGAAAACTGCTCCACTCATCTTTTTAATAGTATTGTTGCTAATTTCA GCAAAACGAAACTGGCGGTAGAATTAGCTGCTGATTATTTGAACTCAGTT TACCAATTTTCCCAATGGATTGAACATTTTTGTGATGATGGAGATTTTGA GTTGATAACATACCGTGTAAATATCAGGCAAATGGAAGAAGTGTTCTCTT CTTTCAATCATGCGTCGTGCCAGTGTATGTTCCCAAATTACAAAGTTAAT GATTATGTCAATTTGTCCAACTATCCAATGTTAGATACCATTGCTGTTGT CGTGGCAACGAATAAAAAGGATTCAAACGAAGTTTATATCTATACGGAGT ATGATGGTATCACTGCTCTATGatgaattattttgttttatgaTCCTATT TGCACATACAAGcttcagtttttttgttttcgtaGCTCACTCAAATATAT ATCACAGTAAATAGTTTTATCTCAAAACATTGTAGATAGCAAGTTtcgaa taaaactttttttaacaaactGCCAAAAGGTTGATATCTATCTTCACCAA TCAGTGGAAATAATATCCCTTAAACTATCCAaatataattatattttatt ttaaagattattagagcctaaaaaatgttcttaatatgttcttatttttc accattttgtgatttttttacccattttcctaaaatatcgggtgttttcg agtccgcaaagccttaaaatgttcttacttgttcttaacattttggccat caaagccttatgttcttatatagtttgttcttataaaaaacgtgtatatt atttttcattttagataaataaaacaaaatgtaTAAGAACGTAAAAAACA TAATAAGAAATGATGTCACTCCTGACATGATTGGAAAACCATATCTCCTG GCAGAAACTTCTTTACGTACAACTGATTGGGGAAAAGATTTTCGATTTCT TGGTGACAAGATGGCAGATGTTAAACCAGACATAGAAATTGATGAAATTG CAAGTGATATTTATTTGGTGCGAAACCTTTTGACAGAATCACAATGTGAG GAGATCATTGGTAAAGCAAATACATTAAACATGCAACTTTGTTGTTACGC ACAGGAACGAAACAATTCCAGACTAGTTTTATTTGATGAAACATTTGCTG ATTTTCTTTGGAATAATATTTCTGAGAAGTTTATAAACAAACTTGAAAGT GATCAAATTCATCCATTCGGTTTCGACGCCGCTAGAGGCCATTGGAAGTT ATCTTGTGTCAATCAAGCCATGCGTTTGAACAGATACAGTGGAAAAAGGA AAGAGTTTTTCGGTCCCCACAGAGATGCTCCATTCTGTCCCAATGGTGAT ATGAGATCATTGTATACTATGCTCATTTATTTGAATGATGATTTTTGTGG CGGACAGACAAAATTTTATGTTCCAAAAGACTCATCTATTGACACCAAAG GATGCACTGTGAAGGAAGAAATCAAGAGACATAGAAGTTTACGTTCAGGG TATGACTGTTTCTCTGTCTCTCCAGAAACTGGTTGTGGtctcattttcaa acaaaacttGATCCATGAAGGTTGTAAACTTACACCAAACAAAAGTTACA AATTTGTCATCAAAACAGACATTATGGTTGAACGTGTGGATGTCAAATTG GGATTCTACCCTCCCAAAGATGAGATTGATGATTATCAGAAATGTTTACA ATTATTTCGCCAAGCACAGCAATTTGAAATGGAAAAGGACAATAAGAGAG CAAATGAATGTTATGAGAAAAGTCTCTCGTTGAGGTATAACTACCCACAA CATTTTGACGCTGTCTCAGAACCTGTGTTGCCAAAGGAATTACCAATCTC TCAAGACCATTCCATATCAAATTCACAAATATCAACTTTGTCCACCAACT CATCTGCTCCTATAACGAACCCATTCAACATTTTCTCTCAAGAGGTTTGG CATAAGATCATGGTCTACCTGCAGGATGACAAATCTTTACAAAGCTTATG TGAAGTTTTTCCATCTTTGAATACAGAAAAACGGAAAGTGCTTTCCAGTA GATTCATGCCAACTGTTGACTACCACAGTGGAGTTTTCACCAAATTCTCA TTTCAAAATGGAGAATTTGTCACAGCCAATCTGGAAAGATGCATTAAAGT TGCAGCAGTGCATTCAATTTGTTTACTCGGAAATGCACCCAATGATAAAC ACTATTTGGTAAATTATGATAGAGAAACAAGGAGTGCAACAACTGTACAG TTGAGAGATCTTCTTTATGGTGTATTTGCTGAGGAATCTGTTCACGGTAC CATCTTCAAAGTAGCTCAAAGAAAAGCTAACAAGAATCCAAATGAAGATT TGTACCATAGTGTTGATAGGAAATTCATGTCAACACATTTCGATCGAGAT GATATAGGCATTGATGTAGAATCTGAAATCAGATCACATGTCACGAGGCT TGGTCGAGAATCTGATGATGAAGAATCTGGTGGTGAATCCGATGGTGAAT CCAGCTCTGGCCTTGATTCTGACTATGACGATTGTGAGGATTACTTCTCA AACATTGGCAAGTGGAAATCTTACAAGTCAAGAGACTTTCATGGACGATA TATTCTCAATGCTATTGACAGATATTATGAATACTGTAAAAATGAGTTAC CACCCGACACAGAAGATATACCAGAGCCTGAATCGTCAGAGGGATCAAAT TCTCAATCAGAATTAGATCTGTATGCTTTGAAATCAGAAGAATTTCAATG TATAACGTACACTGACGAGGCGCGAGATGAATTCTTCAACGATTTCTTTT CTCAATGTGAAACATTTCCACCAACATATTCTGCTACTAAAATTGATGTT CCAAATGTACCGAAGCCAGGATCAACCATCGTCAGAAAACTCGATCGACC TGTCACCATTGAAAAGGATGAAAATTGTTGTTGCATGTTTAAAGATGTTA CTGGTACATTCAGTAAGGAATGTTCAACGCATACTTTCAACAGTATTATT GCTGACTTCAGCAAAATTAAATTAACCGTCAACGATTTGGTTGAAGAATC TCCTATTACGGAAGCAAGCGGCTCGCTGTATGCATGGCTCGAAAATTTTT GCGAAAGCGACTTATTTGATTTAACGGATTGGAGCGTTCGAATGACCGAA ATGGAGCAGATTTTACCCTCATTTAACCATGCGTCGTGCCAGTGTGGGTT CCCCAAATATCGAGTTGACGATTACGTCAATTTGTCGAGCTACCCTTTGT TGGAAAATGTGGTTATCACTGTTGCGAAAAACAAAGTTGATCCTAATGAA GTTTATATTTTCACTGCGTACGGAGGCATTGCTGCTCTTTGATTAATTTC ACCGTCATCACGTCACGAAAAGCAATATACATTATCGCACTTTTGTCGCA CTTGGTCGTTCTGaagttatttttgtattatattttttacagtttttaat gattataattttcttttgtaaCAATTACTGGTATACTAatttctaaaact taatttctaACATTATGATAATTGCAAGAATTGCATATACGAATAATTAA CATTTACAGTTTCTGACTTCGGAAGGGACCATGCTTCCCGATTGGGAAAG TTCCCTTTGTGTACTCCGTAAATGACCGTGGAAGgttaaagctgaaaatt ttcgGGACATCCAATGTGGTGGCCATTACGAATGACAGAATCGGGAAGGG ATTTTCTTTTTAGTCAACGCAATCTTTTCGTTCAGGAAATTTTTCGTGAT TACCAGCTCTGATCATTTATTCATTTCACTtactcattcattcattcatt cattcattcatttatttataaacattttACAGCATTATTTTTGGAGGgcc attttcattttatcaCTTGTCGTATATATTTTGTATTTAAACTAATTATG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00047094TCONS_00047094Clytia hemisphaericatranscript
TCONS_00047095TCONS_00047095Clytia hemisphaericatranscript
TCONS_00047096TCONS_00047096Clytia hemisphaericatranscript
TCONS_00047097TCONS_00047097Clytia hemisphaericatranscript
TCONS_00047098TCONS_00047098Clytia hemisphaericatranscript
TCONS_00047099TCONS_00047099Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00047096-proteinTCONS_00047096-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_121supercontigscaffold_121:488..10037 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.91 4.56 2.61 1.68 20.93 13.6 19.42 18.8 7.32 10.35 11.34 5.49 8.1 6.17 5.5 5.3 9.55 7.99 4.6 5.76 8.61 8.38 9.67 11.39 8.37 10.37 37.76 24.12 6.75 5.64