XLOC_030043 (gene) - C. hemisphaerica

Overview
NameXLOC_030043
Unique NameXLOC_030043
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_122:38249..42216+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030043 ID=XLOC_030043|Name=XLOC_030043|organism=Clytia hemisphaerica|type=gene|length=3968bp|location=Sequence derived from alignment at scaffold_122:38249..42216+ (Clytia hemisphaerica)
ATCGTTTAACAAAAGCAGCTAAAGCTCAAGTGAGGTAGATAGAAAAGAGA GGGGTCACCCACCAACAACCAACTGACCGAGCATAgtaagttttgatttt tgtaatattttgaactCTTTTCTTGGGTTGATTTTTgagttaaatgaaaa aataaaataaagaaaggaAAGCAGACAGCCAGACCAGACTTCTGTATTTT GTATTTCCTTTCTTCCTTCTTTTTCTGCAAGTTTAACAAAAAGTTCTACC ACAATAGGGCATGCGCCTTTTCTGTACTTCACAAGCAGTTACCTGCACAT ATTTATTATATTGTTGCTCTTCTTCATTTCTTCCCCCCGTTTGGTCTCAG AGTCTGGTCTGGCATCTGGTAAGGTAAacaacccgtttttgcctgtgTTT CCTTAATaggaaaagttggtttttctagcttttcttaagttcgaACAGAA TCCTCTCAAATTTTAACATACTCTtgctatagaccttttttcaaagacga cgtcctgttgaataattatgtagtccagccataaaaacaatgatagagcc atgcataattactgtatcatgcatattgtaataattatgcatggttttat cattgtttttctgctggactacataattattcaacagggtggcctctttg aaaaaaggtctatttatgATATGATACTACCCTGAAAAACTTTtcacctg gctggtcattaaaatacaactacgcagctctgctcgcagctctactctac catttttgttttgatttaactttgtattttaatgacaagccaggtctttt atttgagggctatgcatgttagcctctactgatgcaagttacccaatctc aagGTATATTACCGTAAGTGGTCCTTAAATCCGACAGCCCCTACTTTAAA TCAGACCTCACAAATAACTGgctatatgaaaaaaattctatgtttacaaa cattccctctccaagttgaacaataaactatattgcaaaaactctcgaaa caaaacatctaacaagatgactaaaatgtcaagatgtcaattaaaatgtg ataaaaaagtgtgagttgtaaaaataagtccCTCTATTATTCCGAAtccg ttgctcgtgtttaaaacgttaacaattttgtaataaaaaaacatgttttg tataagaagcaattattatgttatttggttcaattggttcagtgtatcaa atctctcagtttagttgacactttggtatcttcgttgcatcacagcgaaa ggttttttattttagtttgtatctttgaaagacctcATCGGAtataggca gggctgtcggatttaggaccactcacggtattccTTCAATTTGTTACATA AGCTTTCTGAACAAGTTTcgtttattcaattttaaaacagtACCATTATT AATAGTCAGGTTGCTGTTGCTagaacatttttttagaaatctcagtgtga agaatctaaaacctttttaaaactTGTTATGACATCAAAAGATCCAGAAA CTTAtgaagtttgtttgttttcagttgTTCAAATGCATACACATCCATAT TTTCCTTGGGACTTACACGaatgaaattaattaaaaaaatcccaacaaaa aaaatatttaaaagtacAGTAAGTAATAATCGAAAGTTTTTTCGTTTTAA GCTCAATAAAACAATGGTAATGTTAAAGAATATCCCTCGAGTTTTGTCAC CCGAGTTACTGTCCGTTTTGGCAAGAATGGGTCATGGTGATGAAATTGTG TTAGCTGATGCCAACTTTCCAAGCGCTTCAACCGCTAAAGCTGGTCCTGA ACTTGTAAGATATTCTTCAGAAAGTCTCAATGACAGAATAGAATATTCGA TAGTGGCCATTAGTGTCTTTGCATTTTAGCTGCAATATATTTTTCCCAGA TCAAAACTCTCTTTTGTCCTGGACTCGTACAACATTCTATAGTAGCCTTA AGCTCTAGCTGAGTCTCAATGGAAGATTTAGAATACTattgtttttgtat ttgaattctCATTATAAAAACGACGTTATTCAACTTATAATTGACAAAAG TTATTTCTTTTATCTCTAAGATTTATAAAAAGAGATTCTGATCTATCCTC AAGTAAAATCGTGTTTTTTATGTGTCCAAAATAAGTTAGCTTTATTCAAA ATCAATTCGCTTTAAgtgttttgttttgcttgccatttttcaaccaatag gCTTCAAATATAACAAATTATAAACCTTTGAAAAGATTATTCATAGCACT ataattgaagatgaaaaattaagaagaaaaatgaagtccATTTTTAGTAC TAAGGTACTTTGAAGCTTCCTGATTTCAGATATACAACTATTTTTCAAAT AGAATTGTTACATACGCAATTATAGATCTTAAAAGGTTGCCTGTTGGAGT AAAAGAAAAGCTACAAAAAACGAGGCTTTTCGACTCCAAAgagctactct cgggtacttaatagccgccccccccccgctaattaatttttcgaaaattt tccacccaggacattcttattccaacccccccgcttattaatttttggga aaatgtttttgaaagttcccttttttgtcctaattcagctgtattagcct ccttttcaaaagttttccacccaggacatttttattccaacccccccgct tattaggttttgagattttttccaacccccccccctgcttattccaacct ccccccccggctattaggtacccgagagtacttttCAGAGTCTGTAAGCC TCAATGCAAGAACTAACtacataataaataaataagtaaataaatttATT GTCTTAATTTTCTAACGTTGttagaatattttttctcaataattatagtg ctctgaattatcttttatGATTTGTTATATTTGAATCAGTTGTTGgaaaa tggcaagcaaaacaaaaagtagtgcatatttaaaacattttagatAAGAG CTGACGGCCATGGGTGTATGGAAATATTGAAAggcgttttaaaattatta ccACTTGATATGTACGTTGAAGCACCTGTCATGTTAATGGATCCCACCGA AAGTGACAAAGTGAAAGGAATCAAAACTCCGATCTGGGAAGAATACAAAG CAGCAGTCAATCAATCAGaagggaaaaatatttcagtttcCTTAATTGAA CGATTCGAATTTTATAAACGCGCAGAAAAAGCATTTGCAGTCGTTGCTAC AGGAGAAAATGCACTTTATGGGAATATTATCTTAAAGAAAGGTGTTTTGT AAGCTATGATTTAACtgtttactcttaggtgccaaataaacggggggggg gggttcgaataaacggggggacctaattaccggggggttggaaaatggac cttaaaaaccctaaaaatggtcaaaatagactaaatttaggctttttaga gaaaacaaggaactttccttttggtagctgggaattttttcaaaaattaa taaacgggggggtcctaataaggtccggggggtttggaaaaaaatcgaat aattaacaagcggggggcccgtttatttggcacctaagagtatgcGTTAA TAGAAAGCACGATGCGTCATTTTGGCTTTTTTATCACCTACAACTCAAAC GAACCTTCTGTCCCCAAAGAGCCTTGTAAATTAGTTTTCATATCGAATAC TCCAAAAGAAATTAGATTGTCTTCCCCGTGCGTGATATTCGAATTTTCGA GACAAATGTGAAGTCAGCCCCGTTATCATGTTTGATTAAAAGTATACCAA TTGTTTGAAGAAGGAATAATTTATTTTNATCATGTTTGACTAAAAGTATA CCAATTGTTTGAAGAAGGAATgatttattttgtaatttttacagGGAAAG TAATTTGGACGAAAGGAGATTGTAactatttttttgtattttacgtTTTA TAAATTTATTCAGAAAATTGGCTATTGAAGATTAAATACTTTAATACGTT ACTGTTTTTTACCTCCAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00047118TCONS_00047118Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00047118-proteinTCONS_00047118-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_122supercontigscaffold_122:38249..42216 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
FUOMPREDICTED: fucose mutarotase isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
14.03 15.46 4.59 2.93 2.45 2.18 4.99 7.83 13.25 13.21 10.5 15.57 10.4 14.33 14.07 15.86 12.95 13.86 6.29 6.62 7.7 8.28 10.43 8.73 11.67 14.24 10.54 13.42 14.34 12.38