XLOC_030095 (gene) - C. hemisphaerica

Overview
NameXLOC_030095
Unique NameXLOC_030095
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_123:487058..493293-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030095 ID=XLOC_030095|Name=XLOC_030095|organism=Clytia hemisphaerica|type=gene|length=6236bp|location=Sequence derived from alignment at scaffold_123:487058..493293- (Clytia hemisphaerica)
AAAAAATGGAAATTCAAAAACTTTTCACTTAAAATCAAATTTAATATATT TTTGTACCAAAAGATTTTCAATGAAACTCACGTGTAAATTTTAAGTTTAA AATATAGTTCTGATGGGTTTCATAGTCATCCATGACTGATTAAGATCGAA ACTACATATCACCTTTGATCCCGCAAACCGAGAGAGCATCATTGCTCAAC TTGCTGATCTGGTCCGCCTTTTCTTTTCTGTTGAGGTCAGCTGGTCCTTG GACACGTTTGCTGCTGGTACTTGCCCTCACCCCCTGTAGAAATGTCATTC TAAGATCGGTAAGTAATGTTTCTTTCACAGGGGGTGTTTTCCACAACCCT GACGCTTTTTTTGCTAATAGGTCACTGAAATTTTTATTGAGACTTTGTTT GAAAGTTTTTGACTTTTATTATATGGATTATAATGCAATGATGGGCAGTT CCAGTTGACTACAGGACAGGCTTGGCTAGTTGGTTGAGTGTGGTTAGATT GGCTAGGGTTGGTTTTAGTGAGGCTAGTTGTTGGAAGACTAGTTGGTTGG TGTTACATTTGGTGATGATGTTTTAGTAGTTGTCTAATTGGTTTTGGCTG TTGTGTTGGCAGGTGTTGCAAGTAGGTGCAAGCCTAAGTGCAGAGGTAGT TTTTGCTGGTTGGCTAGCTCCATTCTAGCATTGTTTAGTTTTATTATATC ATTGGTCATAAAGCTTTGTATCATATTTACTGGATGGTACAATCATGAAA AATAAAATACTACTATACTACTACTACTACCAACTGTTCAAAATATTTCT TGCAGGGATTATTCAATAGTCGCCCTAAGACAGTTAGTCACACTAGCTTC CCGCCAAAATGCGTATCAAAGATTAATGCTGCAAAAGCGCTATATCGTTT ACTTGACTCTCAAGCAAAAAAATGCACCGCAAAACTTCTAAAGGGATTCA TGAAAAAATAACCCCGCCGCACTTTTTAATGAATTTAACTTTTTCAAAAA CTTTGAGAAATTGCCTAAAATTTGAGCCATAGATGAAAAAATTTGAGCCA AGCCAACCTTGAAAACTAATTTGAAGATCAACTTCNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGCTGCACGT TTTATTTTGTTTCAAACTTTCAAGTTTTAATTAATTGTCTTGCGAACTTG ATTCAGGTAACTCTCATCCTTGTTGTGCAAATACATCCTGTAGATAACTG ATGCTGTTTTTCCTGAAAGCTAGATTTCCTAGTGTGACTAACTGTAAGAT ACTTATACTTATTATATTATTTGGTCATCCTTATACACTTGCCTAATTCC GGACAGTTTTCAAAGGACCCTCCTGGCGCTCCGGAAACTTTCGGAATTTT CCAGAGCAGCTAAAAAAACACCATTTTTATCTCCGGAAAGTTCCAGAGCT CTTCTGGAGCAAGTGATTCTTAACACAGCTCCAGAGTTCCGGTGCAGATC ACACCGGAAGTGCTCCGGAATCTTTTTTGTTTTTGTCTTTGTTAAGTTTC TTTGCTTGTTCGTGCATCTCCTCTATCTTTTTCCGTTCATTGATTGTGAA ATCTTCAGTGATACTTATATACCTGAAAGAAACGTTTCTTTCAGGTACCG AATTATGTCATATTTTCTTCTTCTTCCTTATCTGGGCCTGAATATTCGAC AAACCCGTGAACGATGATATTCAGTTTTCTAGAGTCAATTTCTCTCTTTT CACTTTCTTCCTTCCGTTTTTGTTCCTCGGCAGATCTTAAGTCTCCTTTT TGCTTCTTAGCAATTTCTTTAATGTCTCATTATTTCTGCTGTGTGCTTTG TTTCCTCCTTTATCATGCTTCTTGTCTTTTCCTCCATTTCTTGTAGTTTT CCTGCCAGAAGAGTTTTGAGATCATTTTTGATGGAATCACGGGTTTAACA CTCTAGTGTTGGTGTGGACCTTGTTGTTCAGTTTTTGTATGATGTCGTCT TTTTTTTCCAAGTTCATTTTGCATCATATATTGAGTGTTTTTCCCACTGT ATTTCTCAGGTTCTTCGTTATTCGGACACAGTTTGAACATAAGTAATGAT CGTTATAGGATGTCACGAATATTTGTAGTTGATACAAAGGTAGCTGCGTG CACTCATAATGAACTGATCTTTTACATTTTTTGCATTCTAAGCGATTCAG GTCTTCGTCATTGGTACATCTTGACAGGGTGCAGCTTGAGATGGTGAAGC TGCTTCGAAAGGCTGATTTTTATCCATTTTGATGTTATTTTCATGAATTT CGATGTTTTTATTTGTTTTCAGCCATTTTTTCGAAGAGCATTGCAAAAGC ATCTTATCTAAATGACGTCAAATAAAAACTGGTACTTGTCACTTTTCAGC AGTAATCGTGAAACTTTGTGATGCCAGCATNTAGTGAGGTCAGGTAGCAC ATAAAACGTAAGAATACTTCAGATTGTGATTAAAGCATGAAATTTGGCAC AGATGATCCTTAGAGGGTCTAAAACTTAATTTTAAACAGTAACACCAAAT TTTGCTACGTGGCCACCTGCCAGATGGCGTCATCAGGTGGCTGGGCAAAA AATTATTTTTTTGAAAATATTCAAAATCTGATGGTTCCAGTGGAAAGAGC ATGAAATGCTGATAAAAATTGAGGTATAAAACATGCCTTGAAAATCTTCC TATCAAAAGTTATGGACGTTGAAAGTTTTTTGATGACGTCATCAAAAGCC TTTTCAGGCAAAACTTAAAAACCTCGTAATTTTGGTACAAATTGACCAAA TTTCATGTTTTATACATGAATTCATATCAAAATTCATTGCTTTTTCCGAT TCCGATGTTTAAATTGAATTAAAAGCTTTAAATCCTACAGAATACTAAAA CTTACATTTTGAGCTTTACAAGGCAAATCCGAGGGCAAATCAACGCAGCG TTCTCCCTTCAGGAGCACAGTGTACAACCAACTATTTTTTGTTGATGTTT TAAGCCTTCCTATGTTGTTTAGACCCAAGCATCAGATGGAACTTCAAATT TTGACATGGATTCATGTATAAAACACTAAAATTGGTCAACTATTTCCGTT ATTACGGGATTTTAGGTTTTGCCTGAAAAGGCTTATGATGACGTCATCAC AAAACTTTAAACCTTCATAACTTTTAATAGGAAGATTTTGAAAGCATGTT TTATACCTTGATTTTCATCAGCATTTCATGCTCTTTCCGCTGATACCATC AGAATTTAAATATTTTCAAAAAAATAAATTTTTGCTAAGCCACCTGATGA CGTCATCTGCCAGGTGGCCAGATGGCAAAATTTGGTGTTACTGTTTAAAA TTAAGTTTTAGACCCTCTAAGGATCATCTGTGCCAAATTTCATGCTTTAA TCACCATCTGAAGTATTTTTGTTCTAACAGACCTCACTACTTATCTAAAT GATGTCAAATAAAGACTGGTACTTGTCACTATTCAGCAGTAATCGTGAAA CTTTGTGATGCCAGCATCACCTTACTTACCTTTAAGTACCTTTTGGTCTC TATTAGACGCTGCCCTACCTTTCCAGAATTTGGGCTGTTGTGGGTACTAA CTGCTGTAAGGAATGGTGTACTAAAAGATTTCACCTCAATCAAATGCAAG TAGTAGGGTACTAACTGTTCAAGGCTGGTCTTATTTAGATCAAGAATTTA CAGCTTTTTACCATTTAGTAGAGGCTTTTTGAAGCTTTACTGAGGCTTTA TCAAATCAGGTCAAATCTTAAATCCCATGTAGTCAAAGATAGCTTGTTTC TGCTTGTTGGACAAACTTTACTTAACATGTTTAGCCCTATAGCTTTTACC ATATATGTTGGCTTTTTATATAAGTCAAGTAAAGAAAAATTACCAAGTTC AGTTTCAACCCAAGGGCTGCCTAGGGTATTAACAGGTTTCAAATAGTGCT TAGCTTGAGTATCGGCCACTTAGTACTACGGGGTACTATTAACAGGGCCC ACGCCATTTTTATTGATTGATAATCGATACAAAATACCAATAGATTAATA ATTGATGACATCGATAACTAATTGATTGCATCTATTGGATCGATAACAAT TGATAGTTAATCGAGGTAAAAAAATTGTGAATATAGATTCGTTATCGATT ATCAATTTTAGTTGATGACTAATGGATCGAATAATATAGATTATTTATTG TTTTAAATCGATGATTGATTTTATCGATTACGTCAGCCTTTGTACATTCG TTCATCCTTTCATTTGCTTTTCTTGGGATTTCTCGGGAGTAGTCCATTAT TGATTTTTAGCATAGTGACACAAAATGACAGTACCTAAAAAGTGATGGGG CCTGATTTTCAAGAAAAAAAATTTGAAGTTCCTTATTGACATTATTTACT TTATCCAGTTTTTAATTTAAGGAGTTTGGATTACAAAAATCCCTTTCACA ACTTGAAGCTCCCTTCAGAAAGCTACCCTTGCATTGCTCCACTCGGGGCC AAACTGAATATTTTGTATTCAATTCTCTAATTTTGATAAAAGTTATTTTT TTTATTTTTCAGGATGGAGAACTGCATGAAAGAGTGTCGCGTGCCACTCC TGTGGAATGCCAATGGAAGCATTGAGGTCATCCAACAAGATGATTACTCT GCTGAAGAAGCTGAAAAAATACTGAAGATCCTAGAAGGAGGGTACAGTGA TGACAAACCTCTTCCTAAATCATGTGCTCCATCACCCAGTCCATCCATAG ATTTAAGCAATGATCGAGACTATCATGAAAGAATGTTATCCTTAGACGAA ACTTCAAAGAACCATCATCCTCACAATCACCTTACTTCTTCATTATGTTT GGACGAAATTAACTATCACATCAACAAAAGAAATCTTGNGTACTACTTCA TTATGTTTGGACGAAATTAACTATCACATCAACAAAAGAAATCTTGTACC AGCAGCAATCACATCTCGTACATTTCGTCCAAATTTTAGTCATTTAAAAC AGCATGAATCGCGTCGTCTTCCTCAACAACAACAACATCAAACACAACAG CATGTTCAAGGCTCTCCTATCGATCGTGTCTACAGCTGTCCCATATGCGC CAAGAAATTTAGTCGAAAATTTAACTTGAATACACACATCAAATGTGTTC ACAGCGATGACAAAGATTATATATGTCAATTTTGCCAGCGTGCTTTCAAC CACAGCAGTAACCTTAGAAAGCACATAAAAACGGTGCACGGGGAAGAAAA AAGGCTTCCATGTCCTGAATGTAAGAAACCATTCAAACACAGTGAAGCCT TGAAGAGTCATCTTAGAGTGATTCATGGGAAAAATTCTTTTTAAAGGACT TTCTTTCTTATTTTTCTACTATGCTACAAATGAAACATAGTAATATGAAA TTTAACTACACATATATACAATACGTGATTTTAAATCGGATATATCTTTT TACTAATTTTGATAGCATTTTCTTCTATAAAAAGAAAAATTTAGTTTAGT TCTTGTTTACTGTTTTTCCGAATTTAACGAAATCAATTATTTTTTTATAT GATTTTACTTTTCTATTTTTAGAATTTTTAGGTGCTGTATCCCAAATCTT TTTTAACTATTATTTTTTATAATATTATTTACCAACTTATTAAAAAAAAC ATTAAACAGAAAATGCTAGGTACAAAGTGGGCTTTACCTTGGCCTTTTTG CCTGAAATATTCATCAGTGACTTGATGAATGAACTGATTAAATTCAGACA AGAAGAAAATTAAGAAAGGCTAAGGTAGGGTCCACTAGATTATTATTTAC GAAAAAATTATAAATTGAAAAACCAAAAGTGATATTTTAATAGAATTTTT TTGTTGTCATTTTTTACAACAACAATTTTTGAGATTTTAGGTTTTATTAT TTTGTAAGGCTCCTTTTTTGGTGCAAAGCATTTAGTTTTTGATTCAGACT ACTAAAATAGAAAGAAATTTAGAGGCAATAATGGAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00047250TCONS_00047250Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00047250-proteinTCONS_00047250-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_123supercontigscaffold_123:487058..493293 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.85 5.46 3.7 3.7 61.23 48.03 72.95 73.57 99.42 99.14 136.95 95.98 147.55 135.65 176.77 218.21 70.48 54.86 51.56 55.52 98.69 98.57 305.15 251.03 44.62 46.39 100.45 105.64 265.51 265.91