XLOC_030162 (gene) - C. hemisphaerica

Overview
NameXLOC_030162
Unique NameXLOC_030162
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_126:90805..97591-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030162 ID=XLOC_030162|Name=XLOC_030162|organism=Clytia hemisphaerica|type=gene|length=6787bp|location=Sequence derived from alignment at scaffold_126:90805..97591- (Clytia hemisphaerica)
TTTGTATAAACATAATTCAAAAATTGAATCTTTTTCATTTTCAGTTCAAA TTTTATTAGACGAAAACGAATAAAAAATAACTCTCACAAGAAGACGATTT TTCGACGAAAAAAAAATGAAACAAATAAAAAAGAACTGTTGAAAATTCCC AGTCATAGTGTGACAACTGAAATAGACTCGACCAGTTGGACAATGTAGAT GGAGAATTGAGAAAGCCTACAGAACAACACTGCCATCTGTTTTTAAAAGA AAGAACGAAGAACATTTGAAACATTTTTATTGAAAACAAGAAAATCATCC TGTATAAAGACTTTTCAAGTGTGTATTGCTGAAAATTGTGTGTAGACGAA TGACAATCGAAACTGACAATTGAGGAAGATTTCAATTCTCATATTTAAAT CACAAACAGGACTTAACGGAAAGAAATCACAAGCATCCATTTAATCACAG TGTTGATTTGATTTAATTAAATGGAAAGTGTAGTAATCGATCATAAACTC TTGATGAACAGTCAGACTATCAAATGCAAACAAAAATGTCATTGAATGTT GTATTACGCTTCCTTTTGTTGACTTCTATTACAGCTGTTACTGGAGGTAA AAATTGCTATCTTGATGCTATTTTATTTTAGTCTGGAGCACTCACTATTT TATTTGATCCCAACAACAATAAAATACAAACGAAAGGTTATTTTATGCAG TATTGTAGGTAACTCTATGTTTCACTGAAGTCATTCTTGTAGAGAAAAGA GATTAATTTAAGTTATAATTATATTTATGTATTTAATTTGTTAAAGGCCA AACTTACCTCAACAGTCGAAGTGATGTAATACAGTTTGATGACACAAAGC TAAAAACAGAGTCATCACCAAAAGTTTGGCGTTTGGAGAGACAAGGAACC CTTCAAACTCTCATAGAACTCTTCCATTTCAATTTATCATGCAACAAAGA CATTACCCTACAATTATGCAATATTCCACTGTTAGTATATTTCCGTGGCA AATTTTAATAAACAAGAGGGTCCAAATTTGAGGCAGAGAGTAACCTTTCA AGTTAATCTGATTCTCTACTGCACTCTCTCATTTATGTAAATGAATCCAG ATATATTTACATACTTTATCATTTGGGTCAATTTAGTTATTTATAAGACC AGCTCTCACCCAATAATAATGTACGCTCCTTTGTTTGTTTGCTTTCGTCC TGTAAGATGTTTCAGTGCGTTTAACTTTTATGATTTCCCTATTAAAGGAA CAGTGGCGAATGTTTCAACCTGTGTGGACCTAAGTATGAACAGGAACGAT ATACGATTTGGATGAAAGGAAGCTGGGAACTCAGGCTTGATTGGACGAAA AATGTACCTGGTTTCTATTTGAATATGAAATATCAACTCCAGTGTGAACC AGGTAGAGAAATGAGTCTGATTACTGATACTGTACCCTAAAACCTGTTTT TTTATAATTCCAAAAAATTTTATGTAACTTCAAAAGTTTACAACTTTTGA CCACTGAACCAAATTCAAAGTTTTATATCAAATTTTAGGTTGATCTTTAC ATTGAAAAGGAAAAGTAAATATTCACATCATTTTAAACACAGCTAGGAAC TGTGAATAAATGATAACTATTATTTTATTTTAGTTCTTTGGACACAGTTA GCCATTAAGTATATGTAATCACATGATAAAGAGTGCAATTCGAATATAAT TGCACGAGTGATTTTTTTGTTATTAATTTTCCGAGTCCGAAAGGACGAGG AAAATTTAAAACAAAAAAATCACGAGTGCAGTTTTCGAATTGTACGAGTT ATTATGTGATTACGAGCTAATCGCACAATGGCTTTCACTGCTTTTTCCCA TTTAGGAAAGTAAATTACAGAAATTACACTGAGAGTTTCTTTATTATGTC TTTCTTTTATTGTTGTTTATTGATTTTCTTTCTCACAAAATAAATTTCGA ATGCAATTAAAACGTTCGATGCAAAAAAAAACGTAAGAAAAAACATTAAA ATCAATTTTGTAAACATTGGCGCGGCATTGGAGAGCTCTCTACAGGATGC AATTAACGATTAATTGCTCTCTTTGAGGGCGTGCCAAATAACCCATCGTG CGATTAACCCTTATAATCATTTCATAGATCTTCCTTATAAAAATCTTATT CTAATTTANAAATAACCCATCGTGCGATTAACCCTTATAATCATTTCATA AATCTTCCTTATTAAAATCTTATTCTAATTTAATTTGCTTCTATTTTGAA GGTTATTGTGGCAACGAAATCAGATTACCGGTAGATGGTTCGAAGCTCAT TCGAAAGCCAAACGATTTACAAGACTATTATTGTGACTGCGACTGGCACA TTTCTGTCGAGGATGACAATTACTACATCAGAGCTGAATTCCTGTAAGAT TGTACTTAACTATCGCTAAGCCTTAACCCTATTTACCCTGAAGGGGGTAG CATCGACATCATCAATTTTGGGACGACGTCATTTAATTCTTTTTTCTTTG TTTGTTTCTATGACCGATTTTCATGGTCATAGTTCTTCTATAAAAAGAAT ATAATTGAAGGTATGCTTAACAAAGATTCTACCTCTCCAAAATTTACATT CAGGAGATTATTTTTGTAGTCGAAATTACGATTTAAAAATCGCTTGAGTT ATCAATAATTAACTGTAGTAGTGTAGTGGTTATCAACCTTGATTCCTGTC TAGGAGGTCAGGGTTCGATTCTCACTCGGTGCTACTTTAATGGGATAAAC TTTCGCGGGGATTAAATTTCGCGGGTTTCGCGGATTTGGGTGTCATCCGC GAAATTAAATCCAAATGGAAATTTGGAAAAGCCTCATCCGCGAATATTTC TAATCAAAACTCAAAACATGTCAAATAAATACTTTTTGAATGGTTACTTG CATCAAAGAAGTGCAAATAATGGGTATTTCAACAACCAATATGCATGATT TGACAGTATAAAGATACAAAATTGTGAAAATTTTGCCACCCAATAGTGCC GCCCGCGAAATTTAATCCCCGCGAAATTTTTGAATTTCGCGGATAGGCCC AACCGCGAAATTTAATCCCCGCGAAATTTTATCCCATTAAAGTATGATTC ACTTGGCAAGTGCATGTACCTTCGCCCGGGTCGACCCATGCCTTGTGAGG GGAACTGGCTACCATCATTCTGATAAGAGAGTATGGGGGAGTATGTCAGG CATCGCATGTGGTGTGGTGACGATACTCATAGGTTTAACACCTGCGAAGA TGTATGTCCTATCGGGTTTTTCGAGTATCGTCGTCTATACACCAATAACT CTGACGTGTCGCGAGCGCAGGGTTAGCGGTGTCTAGTAAGCGTGGTAATT TCCCTATCCTAGGGTAGGTATCTATCCAGGGATAGGGCCCATTCCGAATG ATTCGGAGGGTTCACTTCTCTTTCTCTCTTCTCTAAAGATGTTTATATTG TATAAGAAATATGAGAAGTCGGCAATTCTCAGTAGTACGTGATATTTCAA TCTCTACCCTAGGCATCAATTAACAAAACATCATACAAGATCAAACAAGC TTCACATCAAAATGAATGTCAAACCTCTCCCATATTTTAGCTCAAACATT GTAATATCTGTTCATCATTTACAAATTTAGGCAATTGAAACTCCCACCAT CGTGCGTTGACTACATAGATTTTGAGGACCCAGAGTCACAGGACACGTCT GGTCCACACTGTGGTACCGAACTCACCTCTTACACAACCTCTCAAAATAA ATTGATCATCAGATTCAAATCAAGGGATGGTGCTACCACGAACGGCTTTG AAATACTCCTCACAAGCAAGAAGAAGGAAGGTAGTTTTTTATTGATTTAA TAAATAAACGCTTATAAGGACGCACGAGGAATAAATATTTTTGGGACTTC GACTCTTCCAGCATACTAGATGACTAAAAATCGGTATGACAAGGAAAACT TAAGGACATTATTACAGTTTATGAAGACTAATATTACCATATAACAGTTA TGGTGACATCATACAATAACACCTATATTACTGGATAACACTTATGATAA ACGACTCCAGTCTAGGGACTGTGCTGTACTGTTATTTTTAGAAGGATGGA AGTTCTTAGTTATTCTTATAATACATAAACAAAATGTACAGCACACCCTA TATCCTTAAGCTAGTAGCCAAGCAACTCCAGGAAATGGAGCAACCATCAT TCNGTTATTTTTAGAAGGATGGAAGTTCTTAGGTATTCTTATAATACATA AACAAAATGTACAGCACACCCTATATCCTTAAGCTAGTAGCCAAGCAACT CCAGGAAATAGAGCAACCATCATTCGTTCAATGTCAAACAAAAGGTTCTT CGTCGTAAAAAGTGCACAATATAAAATCAAATAGCAAGCTGACTGAATGC CATAGTTTTATTTGATAATAAGCCTAATGACGACTACCTAGATACAGTGA AGTCTCCTTTAAAACTAAAACCTTTCCATAACTGGCCCCTTCAATTAACA AACTTTTAGTATACGTGCTACAGCGAACGAAAAGTTGTTCCAGTTTTGGA GACTAGCTTTATTAGCTTTAGACTATAATGAAAGTTCAACGTAAAATCTT TTTGAAAAATTCACTTATTTCCAGGAGATCTTGAAGGGTTACAGTCAGTG GCAGCTGTTCTTGGAGCCATCAGTTTTGGTGTTTTCGTCGGTTTGATGTT ATGTTCAGTTCTGTACAAACGCTGGTCCAGGGGACGTCCTACGAATGACG TCGCGGAAAACATTGAAGAAGGAAACGAAAATGACGTTGATGATGCCATT CAAAGAGCTGCACCCCCGTCCTATAATAAAGGTATGAATTTCAGGAGGTT TTGAAGAGAGGTATCTGACCTCTATTGTTTTTATAGTTTTCTCTGTTATC ATTATGTGAATGTTAAGTCTCCGAATTTCTCATTATTATTATACCTGAAG TATGCACTCATCGGTACAACTAATTTTGTGATCGATTTTGAAACATTTTC ATATCCCTTTCAGCGATGACGGTTTAGAAAGACTGATTGTTTAAAATCTT CTTCTTCCTTTATCAGTACTGGCAGCACCTGAAGACTACCCATCAACACC TCAAGCTTCTCCCATCATGTCTCGTTCGCCACACCTTCCAACTGTACTAC CGCCAAAATACCCTGGGAAGGACAATGAACACGATATAAGTAGACGAAAC TCTGCTAATATAGAAATGGCTACCTTACCTCTTCCCACGACTCCCTCTTA CGATGTGGTATCGGAAAGCGAAGACGAATGGTTCCCCGTACAAACATCAC CTTCCACACGGTCGCGGTCGCGCTCAAAACTGGTCGGAGAAAACGGGAAT CCACCTTCTTATCTAGCCGTGACTTCAGAAGGTTCAGAGGCAGAAAATCA TGCTGCTGAAGCAAACTCTCCAACTCCTTTAAATGATACACGTAATAAGA ATCGGGCTTCCAGGTCTAAAAGGACTTCATTATCGACTATACATAAAGCT CATAGAACTCTTTCTCATTCTGATTCGGACGAAGAAACCGAAGAAAGTGA TCATGAAAATCGCCGGAAACGTTCGGGGTTAACAATACCGGGTCTGGAAC CCGGAACTTCCGGACTCGCTCCCATAAACTCAGATTCCGAAGGTGAACAA GCGTCAACGTCACCTCGAAGAAAACGACCACCTAGTCTCTTAGAGGTACC TGGTGTTGATTTTTATCCGGAAAGAGACCTTGACCGGTTATCACCGGAAA TCAGACGACATGGCTCTGCGAAAGAGAGAAGTTATTCTGATTTGGCAAGA CATGCTATTTGTAATTCTATAGCACGATCACCTATTAGTTCACCAGACTT TAGCGGTAATCGGAGGACTAGATTGAGGAGCGAAGAAGGGGTTTCACCTT CTCATGCAAATGAAACTGTTAATGTTGATAGTGTACATCATACTAATTCC CCTTCATGAGTCATTCAATGTGCTCGTGAAAAATCTTCAAATATATAATT TCGCGATCTTTCGTTTTTCGACCTATCACGAGAGTTTCTTTTTCTCGTGA AGGTTTTTGCGGCCAAAATATAACTTTTTAATTTTCATAACTTTTAATAA TTTTTATACGTTTTATGTGTAGTTTTATATATTTCATTAAAAAGTTCTGT TGACCTGATGGTCAATTTTAACAGTTGGGGCTATCAAGAGAAAATACTTC ACAAATATGAAGCGGCAAAGATAATATCTTCGATTCTAGGCTGAAACCCA ATGCCATACTCGTAATTTAAATGGAAGTGGCCATCTGAGCAACTTGAGGC AGCAACACGTATTGCTTGTCGGTTTCTTTTTCAGGGGTTGAGTTTTGGTC ATTTGAGTCCATTTTTGTCTTTCTGGAAATCAATACCAGAGAAGATCTGT ACTGTAATACAACTCAATCAGCCAGTCTCCGAAGTCATTGCCCCCTCCGC CTTTGGTCAATTCACCATTAGAATTACAATTTGATTACTGTAGTTTTAAT TTTTAAATTTTTTAAACGAATATACATTTTATGTTTGAGGACTTTTACAT ATTAGTTAGGTGGGGTTTAGGTTTGTGAAATAATTGAATTTATTTAAAGA CGACATTTTATACTACAAAATATAATTTTACCCGTTCAAATGTACAGGAG ATGATTCTACTATAATTTTTTAATGAATCTTATATACCCATCTGCACTTT CAAAATATTTAACTTTAATAATCATATACAATTATGGAATTATGACCTTT TGAAATTTAGTGAAAAATGAAATGAATTGAACATATA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00047349TCONS_00047349Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00047349-proteinTCONS_00047349-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_126supercontigscaffold_126:90805..97591 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.43 2.29 0.9 0.89 28.79 21.73 23.42 24.59 16.35 20.22 16.41 12.71 16.91 14.82 16.78 19.76 13.47 13.71 11.97 15.94 10.2 9.88 16.13 16.49 9.24 11.56 15.34 11.32 25.5 25.03