XLOC_030270 (gene) - C. hemisphaerica

Overview
NameXLOC_030270
Unique NameXLOC_030270
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_131:32934..36545+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030270 ID=XLOC_030270|Name=XLOC_030270|organism=Clytia hemisphaerica|type=gene|length=3612bp|location=Sequence derived from alignment at scaffold_131:32934..36545+ (Clytia hemisphaerica)
TTAGGAGAAGGATTTCGTTCATGTGACCATAAGAGGAACCCCCGGAGGCC
CTATCATATCATGTTCGTTTCAGCTGTTTGGAATGCTATCAGATTCAATG
GAGGAAATGTTTGGAGAAGGAGATGATGATTGGGAAGGTGTAAAGTGCTG
TCATGCTCGACTGGCCAAGGATATCCTTATAAAGAAACCGATGATGTTTG
TGCCAAACGAATCAGATCATTTATCGCTTCCTCCGTATTATCTAAACGAA
ACGTTACTGAAAAAAGGAGAAGAATTGGCAAAAGAACCCATTGTCAAATT
ACCATCGAATAGCAATGTTCACAAATTTTCGGTCGTCGACGATGTTGGGC
ATCCAAGCCTTGTGACCctttttctggcaaaaaaaaacaaaaaccctTAT
CATCACCTGTCATGACAAATATTGCCAGGCAACTGATACGAGGGAGAGAA
GTGCAAAAAAGTATTTCGAAACTGATGACCTTTGCACTCATTTGAAGAAA
CTCAAATCCTGCTTTGATGTATCTACGCTGACGTTTTCAAGCGAAGATTG
CGACGACGACGCCGATGATGACAAAGAAGTAGAAGAAAACGACGATGCAA
ATATTCAACCTGTCTTCACACAGGTACTTCAGTAATATTCTTTTTAGGGC
GAAAAATTAGCATTAATAAGTATAAAATTATAAATCCTAAGTACTTTTGA
ATACATTTCGAGCTTAAAGGAAAAGGTAAAAAAGGGTTAATTTCTGATCC
AGATAAAATtcaagaaatgatttttttgcactttgtcGACCCTAAATTtc
gaaatatttatttttattataccgaccgacccatattacGATCTGGccat
agaacaacaaatttaatttctaacgcctattttagcaaaaatgaGATTTA
CAAACAAGTTTATATCCTAGGAATCATATACAAATACACACTACCATTTT
TGAAAGTGGACCCCCCCTGGTATcgatatataaaaaaatagtgAATAATT
TAATGCTCTTAAATAACAATTGTCTCATAGAAACCAAATGAAAAGGTGTT
TGACGAGGAGCTCAAGCAGTGGCAGTTTCACAATTGCGCTACAAGCAAAC
AATCAGTCGATCAAGATCCCTTTTACGAAACGTTGATGTCAAAGGTTgag
gaattttcactgaaaattttcaaacggGAAGATATACAATTAATACCTGA
CAAGACAGGCTCGTGTGAATGTGAGGTATGACCACCACTTTTAAAACTGG
ATAATAATGTTTtattatttgagaaaattcaaattcaaaaaatttaatga
tttgaaattttaaaaataatgacaaaaataGAAGAACAGAAAGTTCAACT
TCTGACCATAGTTTGTTCGTAATTCGGTATATCGAAGTTTAATGACATAA
TGACACAATGACATCTTGTTTGAGCAGAAGAACCGGAATAAATTCATGCA
ACTCCAAAGTCATTTGCAattatactgtaatttagtACTACCATAAAGTT
TGTTTTCCTTTCGTTCAGGGTGTATGGTTCACTGAAGATATTCCCGATGG
TCATTTGATTCCTGATGGCGAAACCACGCTTTATACCTCAGCTGGTGCTG
TTGATGCCAAAATATTCAAGCGAAGGTGCATCAAAGGATCGTGCATTCGA
AAATATGGTTTCGAAGATTGTATTTATCGCTCATCCCCGAGTGTAGCCTG
CAGTTGGGAAATGGGGTGGGAATTCGTGGATTTGGTTATGACCAGTCGCC
AAACATTTTCCGGTTTTGTAAAGTTCTACAAACGAAAATACAAACgtgca
aaatcaaaaaagactttCATGTCGAGAAACACGTTCATCAAGTGGTGGTT
TTCCTGGGCATCATCTATGAAAATCAACTTCAGGAAAAAATGTTTCGGTT
GCGGCGACAAACTAAAATGCTTGGCTGCAGACGGTACCAAAATAGGAATC
ACATTGAAACAGTCTGACGTGGTTCCGATCGAGACGGCAGAAGGtgaacc
aatcaaaacgctcACACGAAGGTACGGACGCACCTTCATCAATAACAACA
ACACGACCGGTAAACGAGCTGATGTCAACAAGGCAGTCTCAGAGTTGGCA
AACCATGTGATGGGGAAGAACAAGCTTGATCAAGAAAAGATCGATGAACA
TCTTGAAATGGTCAAACATGATTGCAAAGACAAAGTGATCGTTGATGTAG
TCAACAAATTGTTTGTCCAATCAGTGCATCCACTTGAACGCGGTTCATTG
GCGAAAGTTCTTCACGTATTGACCACAGATGCCAGCATCACCAACACAAT
acctaaaaaatatattgaaatgCTCAAAAAGACAGTCGACTCTGAAGTAA
CGAAAGATGCTACATTCAAAGATACCTTTCACTGCATTACGAAGCACTTT
TTTCCCGAGCTGGGAGATTGGTATGTTATTACAACCAATCTCTCAAATGG
TATCATTGATCCCTACGTGAAAGATTTTATCACCAAGCTCGTATCGATGA
GAGAAAAACTAGAGGAAAATAACATTCCACCTCAGGCATCATCCATGTTC
GACGTTTACAACCCAGCAAAAACAGGGAGAGCCTACTATTTCACTGATCA
CGGTAATCAGATCAGGAAGCCACGTGTGTTCTCCATTGACCGTGATAATG
AGAAAAAGAAAGGTAACTTTGATGATACACCTGATGTACCATGCTCAAAG
ATTTTCCCTAATGTATCCCACAAAGGTACGACTTACCTTTTCCTTTGGTT
CTGTCCGAGTCACGGCCATTGCTGGGGATACCACATCATTACATCGTCTG
AGGGTCGCAAGGATGCTGCCAACTCGCTTTACTCGTATCTAGAAAAAGca
ccagaaaatattttttatgacttctcttGCTCCTTGGAGGAGTACTGTAG
AAACAGAGAGAATGGATTTTTTGCTGACACAAGATTTTTCCATGACATTT
TTCATGGCTACACGCATAAATGTTCACTCACATACAAATCACGCCGTTTG
TTGGGATTCAAAGGAGTGAACACTTCAATCTGTGAGCAGTTTAATAGCTT
TCTACAATGTGTCAAGACGTCTGGCAAACTAATGACCCAGGAACATTTTA
CGTTTTATGTTGAATTCTTCATACACCAATGGAATGTTGctagaaaaata
tcttttgaaaagaGGGCATCTATTGCTGTAGCTGGATATAATTAAAAATG
TGtactattttatttttcaaataagtTTACGTGATTGAAGTAAGACGACA
AAAATGCAAAGGCTTGAAATGTGGTTTCATCTCGAAGGGATCGTAAAAAT
TGGTGTTTATACTAAAGCATTTTGgttgataaatatttttaaccttttaG
AACTGACTCTGAGTGCATGAGTCTGTAAACACTATTTTCTAGCCTCGCAA
TAAGACTACTCTTGTTAAATCTAACATTAATATTCATTCATTGTCACATC
ATTATTTCAATTACAagttattgtttattttgagtAAGGTTATTTACACT
TTGAAGTATTTCATTAAATAAATCATTAATTTGGTGGTTGAATGTTTTCA
GTTTGTCAAAATGATTAATTTTGATCATTCCAAAtaaatttgattgtttt
gatattcatttt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00047518TCONS_00047518Clytia hemisphaericatranscript
TCONS_00047519TCONS_00047519Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00047518-proteinTCONS_00047518-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_131supercontigscaffold_131:32934..36545 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.24	0.21	0.51	0.59	5.32	4.17	4.16	5.37	3.25	3.98	3.86	3.04	2.47	1.83	0.78	1.09	0.85	1.33	0.95	0.58	0.9	1.3	0.3	0.49	1.73	3.45	0.83	0.78	0.51	0.6