XLOC_030358 (gene) - C. hemisphaerica

Overview
NameXLOC_030358
Unique NameXLOC_030358
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_133:395961..401946-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030358 ID=XLOC_030358|Name=XLOC_030358|organism=Clytia hemisphaerica|type=gene|length=5986bp|location=Sequence derived from alignment at scaffold_133:395961..401946- (Clytia hemisphaerica)
TTTTTATTTGAAACTTTGTGACGTCGCAGTACTTTTTCATGAAATTGACG TCAGAACTTTTTTCGTTTACAAATAGCAGTGTAGAGTCTTCTCTAATCCG AGTTTTCTACGCTTGTCAAACTTAGCGCGAGACTTTTTGTATCGAAGGTG GATAGGTTTTGCAGCCGCGGCGTTCAAATTTTAGAAACCTTAACATATGT TACTGGGCTAGCGTTACAGACATTTTTCATAAACTCGTTTAGTATAGTAA GATTTCATTGAATGGATTGAAAGACACAGATCATAGATATTTTTCATGAA CATTAATCAAATGGTTAATAGATGTTAGTCACACATTTAATTGACACTTA ATCCTTGATAAATCAATACAAAAGGTTGGATTCCATTGATTAATATTTAA TTTAGGCGATATTGTAAATAGTCCAGTATTTTGGCGAGGGGAATAGACCT TTTTTCAAAGAGGCCACCTTGTGAATAATTATATAGTCTAGCAGAAAAAC AATGATAAAACCATGCATAATTATTACAATATGCATGATACAGTAATTAT GCATGGCCCTATCATTTTCTTTATTGTTTATGGCTGGAGACTACATAATT ATTCAACAGAATGTCCTCTTTGAAAAAAGGTCTATTTGATGTTAATGGCA TTCAAAAATTGTGCGAGGTTTTCAAAAACAGCAAAAAAAAAAAGAAATTT GAATATATATCCTTTTTAAAAATTAGTCTTTTCAAACGAAACTTCACAAT ATTGGTTCTAAAGTAAGTTGAAGTAGGTTGAAAATAAAAATTTTGTAAAA TGGGCCAAAATTGCGGCACAAATCAAGAAAAACACTATGTTGATAAAACA GCAGCCACAAATTTGTTCAATGAGTAAAAATCATTTTTTTCAGATGAAAC TCGTAGCAAAAGGGTTTATCCACAAAATATCAAAAAAGGAACCAAAATGG GCCATTCCAGTTTTTTTTCGTTTCCCCCCCCCCCCAATGGACGACATGGA ATTTCGGTAGCAAATTGCTTTCAAGAAAGTCAGGAATTTCCTTAAAAGAT TTACAAAATACCTATCAAAACCGTGGAATTCTGTTGCTGTAACCTAAAAA AATCATGGAATTCCAATACTATAAAGCAAAATTAAGTAAAATTCATAGAA TTCCGATACTTTCTCTTTAAAGTTTGCCTGGAATTCCGTGCCAAAATTTA TTTCAAAAATTGATGTCATCCATTAGGGGGTAATGTTTTTTTTTCTGGAA TGGCCCAATTATTGGGTCATTGGGCTAAAATTGCGGCTCAAAGTTGGCAA TTTTTTTCATATATGCTTTGATTGAAGCCATATTTTAAGCCCATTGAAAA CCCTGCAGCGACAAATTAAACCCACAAGTATCTTAAGACCTTAAACTACC AATTTCAAGAAAAGCGGTTAAAAAATATTGAAGTCTTAAAGCAGGACAGC ACACAAGCCAACCCTAAAAATGCCAACTAATACTTATATGTAACAGCTCA GAAGGTTATAGTTACAAAAAATGGTATTTGCAGCCACAAAATGTACACTC TTTCTTAAAATAACACTGTATTGTGTCAGATTGTGTTTGTTTTGTATTAG CCTTTGCAAATATTCATTTTTCGAAAGCAAAACCCAACCTGGAATGTGTA AATTGATAAATTAGTGATTTAAGTATGATTGAAGCCACATTTTAATCCAA TTGAAAACCCTGCAGCCACAAATTAAACCCATAAGTATCTTTATCAGACC TTAAACTACCAATTTCATAAAAAATGGTTAAAAAATATTGAAGTTTTAAA GCAGGACAGCACATATATGCCAACCCGTTGAGTGAGCCACAGTGACATAC AGCCACAAAACCTGCCCTCACTTTGCCATCTTATATTTCAAGACTGAATC ACTCAACTTCAAAGAGGGCCATATTTTTGGAAAGCTCATCAATTTCCTTA TTTTATGGAATTTTGTACTACACAGCAGCCACAAGAATGTCAATGCTGTG GGCTAAAAAGTTATTGTGATTGAAAACCTCACTTTTTGGGGTTCTATTTT TGAATGCAATCTGTTCTGTTTACCGTCCCGTTGCAAAAAATATTTGATGC AGCAAAATTTCATTATTCATTATTCATTATTCCTACCTGGTGCTTCTCAT TTCCAACGTTGAAATTCCACCATGAAATCGAACTGCCTTCACTTTCGGAA TAAAAATGACATACACGAAAATTCAAACGCGTTCGAGACGCGTCCAAAAC TCGAATTTCTAAAACGCCTTTGTAGCCACCCACTGCTTAAAAAAATGCCT GCCCCATTTGCGGACATGATTGGAACCATACTTTTTACTTGAGGCGCACA TTTTGTTAGCGAAGATGTTATTTTTGATTCACTTTGAGTGTTTTGGATAG CTTGGCACAGGAAAAAAAGAAAATAATGAATTTTTAAGAAATAATGAACT TTTTTGAGCGGGGGCACAAGAGCATGCAGGCAGTCAATGCTAAACAGAAC ATCAAATTCCCCTCGCCTTTTTAGTATTTTTGTCTGGTAGAGGAAAAGTA TTATCTATTAAATTCCCCGGACAAAACTGCCTGGTGTTTGTGTGCATAGC TGTCAACTCTCCTGCATTGCAAGGGAGACTTGCATTTCCAAACATTCACC AACATTTTGAAAAATCTCGGGCATCATCCATCAGCATCATCCATCAACAT CACGCCCGTTTGCGGAAATGCAAAAAAATTACCTACCTTTACTAAATATG TCATATCTCAACATACAAACAAGCTTTTTGAATTCTAATGAAAGCACACG ATTTTCATGTAAATTTCACACCTTCTTGGTGCGAAAGAGAAATCGTGTAT TTTTTAATACACCGTTCACTAACTCAAATCAAATGACTTTGGAGGTTCGA TGAAATGGTGGCCGAATTGCCGTCCCATGTTTTGTCAGATAGTCCCAAGT TAGAGCAGTTGACGGAATCTCGGAAACGGCTTGAGATTTTTTTAATCTGT AAATAGCATGTGATTCTGGCAGGTATAAATTCTACACATGCCCTGAAAAT TCGAGAAGTCTAGCCTGTGTACTTTTTATGCTAGACTGAATTAAAAACTA AATTTTCACATCCCATTAAACAAAATTTTGAACTTTTCGATCAAATATCT CAGAAACGGCTTAATCATTTTTTAATTTTGTAAAAAGGATACGATTCTCA TGTAAATTCTACACATTCCCTGAAAGTTACAAATGATGACTAGCCTATAC TAGTATACTTTCCCACTAGGCTGTATTAAAGGCTAAATTTTTACATTTTT AACAAAATTTCGAACTGCTAAGATATTAGCTTGAAATTAAAACTAAAATA CCAAGGTCTAAATTTCTGTTTGCAAAAAAATGTTTCTTTGGAATGGAAGC CTAGACTGCTCACAATTGACAGTTAAATATCATGATACAACCTTGATTTC CTAAGGAAGAGGAGCTGTTTTTTTCGTCCAGGGTAGGCCCTTGGGAGAAG GAGACCCTTATCCAGGACACTATGAACCAAATTTGGACTTAGAAACTTTA TTGGATTGAAAAATCAACCCAAAACCAACTATTTTTTCAGTACATTACTA TGGATTATTACATAACTTGCAATGGGAGAATACTTCAAGGTGATGAGACC CCCAATAATATGGGCACAATTAGAATTCACCCAAGGCTTGTGGGTGGAAA AGGAGGTTTTGGATCAATGCTGAGAGCCATTGGTGCAAGAATTGAAAAAA CAACCAATCATGAAGCATGTAGAGATTTGAATGGCAGAAGAATGAGAGAT GTCAATAATGAAAAAAAGTTTGTTTTATTAGGGCTAGCTCAAAATGAAGG TCACAGGTCATTATGTCATGCAGACTACAAACCAAAAAATTCTTAACACA CTCGTGACATTATATTTCATAGTATAAATTAAAACCGTACATCCTGTGCC CAAGTTCAGGAGTTGCCATAAAGTTATGGTAATAACCGGGAGGGCACATT GCTATACATTGTAGCATAAATTTATGAAAATATGCAACGTTAACACAGAA TATGCTATTTATAAGATTTAAAATGACAAAGATAATTTTTGTTACCACAT TGTAATATAATGATAAAAATATTACAATAGACCAGGTGTTATATATACAG CATGTAGTAAAAACCTAATTACTATATTTTTTAACAATTACAAGTATTTT TCAACTATTTTCATTGTGTTTTGCAGTAATTAAAGCAGACTTGTTAATAC TGACCTGTGACCTGTGGACCTGTGATCTGTGTTTTAAGCTAGCTAGTTCT ATCAGTTTCTCCAAGAGATTATTTTATAGAGACATGTCCCTATTGTATTC TTTCTGAAGGGAAGTCTTGAATGCCACATGTAAAAAAATGTAGTTTTAAA ATAAATTGCTCTGCTTTATCATTTGCATTTCATCTTAAAAAACGGTGTGT ATCAAAAATTGCACTTAATTAATTTTGCATCAAATGTTAGAAGCTTTCAG AAAGGATCATTATAATCTATATTTTTATTTTTATTATATTAGGATAACAG AATGGCTGCAGGAGCAAGATACCAAGGAGAAGGAAAGAATCCAGAAACAT AACGACAGAATAGAGCGAACACTAAATCCCAAAATGAGATATGAGGATAA GGACTACACCAAAAGTATACAAGGCAATGTTGACAAAGTCAATGAAGCTG TCAAAATTGCAACTACCGTAAACAAAAATAAACCAGGTGAAAAGCGTAAA ACCACAGAGCAAGTTTCTAATAGTAAAAAATCCAAAATGTGGTTGGGTCT TGATGAATTAGACTCTGATGTAGATTCTGAGGTTTCGGAAAGTGACCCAG AAGATGGTGAAATCACTAACAAACTTGCCAAAGAACCGAAGACAGATCAA CAGACTAAAAAGCAAGAAGAATCCTCCGGAGATCCAGTAACAACTGCAAT TGAATCTGATAAGGACAAGGTGCCTGAAGAGAAAAAATATGTAGAAAATA AAGAGGAATCTTCGCCAAAACAAAATGAAGAAGTACAAAAGAAAGCTACG GTAAGTTAATCACAAGGGTTTTTTTGTTACCTTAAAATCATTGGAAAACC CCTAAAACTACTTAAATAAAGAAATTGGAATAAGAAGGGAAAATGACCTT ATAATAGGGTAGGGATTTCAGATTTTCAATTATATTTAGTGATAATGTAC CATAAGCAAGTAATAATTACAATTTAATTTGACCAACATAATCCAGAATT TGTCTTTGTGAAGACACTGTAAAATGACTATCTTCTCTTGGAGTAGGCTG ATTTATAAAGAGATGGGTATAAGCCCCTCTTCACACTAACAGCTCAATTT ATTCTGTTAAGGATGAACTTTTTATATAATAACAAAAACAATTTATTTTA ATTGCTTTGTTTATTTCTTCATTACAGGGTCCTGAATATTTATGTCTTGA TGAATACAAAGATGCTGAGGAATTGCAATCAGTTGGTTTGGAACGTTTAA AATCAGCTTTAATGTTTCATGGTATGAAATGTGGTGGCACATTACAACAA CGTGCTCAAAGATTATTTCTTACCAAAGGAAAAAAATCTCTGAAAGATCT TGACCCTTCTTTGTTTGCCAAAAAGAAATAATTGATATCTTAGTAACATC ATTTTCTTTTGCCTATTTTCATTTCATTTTTGAAATCAGATACTGGGAAA TTTGCTTTATCAATCAAAGATGTTTACTATTGCAAAAACGAGAACAATGA AAAATTTCTTCGAATTTTTCAATTTGTTTATTTTGTAAAGCTCTACCTCA CCCAATTTACTCTCCCAATAATTTCAAAGTAAATTTTTTATAATAAGAAT TGTAACATGAATATGTGGAAACAGGAATTTTATTGAGGCTTGAATTCTAT CATTGTTGTTACTTTATTTTTATTTATGAATAATGTTTTTTGTAGATATA ATTTTATCCTTTCTCTTTTAAAATTTTAATGTACCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00047675TCONS_00047675Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00047675-proteinTCONS_00047675-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_133supercontigscaffold_133:395961..401946 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
SDE2protein SDE2 homolog Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
24.18 22.79 25.17 25.53 40.23 30.56 30.33 29.53 23.02 22.21 16.61 16.02 14.25 16.5 16.27 14.41 18.58 18.74 8.98 11.24 17.44 16.49 31.8 29.24 24.37 22.86 14.49 11.93 23.23 24.03