XLOC_030468 (gene) - C. hemisphaerica

Overview
NameXLOC_030468
Unique NameXLOC_030468
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_139:188518..194742+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030468 ID=XLOC_030468|Name=XLOC_030468|organism=Clytia hemisphaerica|type=gene|length=6225bp|location=Sequence derived from alignment at scaffold_139:188518..194742+ (Clytia hemisphaerica)
ATTTGACGGTCAATAACTATAAAATACTGGAATGTATATGTTTGTAATAC ATTTTTGTATCttatattataaattaaaaaaactcttACATACTTCTATC GTACTAATCAAGCTATAATTAGTACATAAACCCCCGGTATTTAAAGTGAA AGAACAATAGACAACTCGGAGTCGATTGGTTTTCCTCTGTACAACAAAAA TGGCTGATTCGTTTGATAGAGCGAACTTCGCGAaagtctttgttttgatg tgacTGAATTTTTATCGGAgttcaaattttacaaaacttttcaaCTGTAT TTCAACCTAAAACCCTTGGGATACATTTTATATATGTAAAAAGTGTGAtg atatttcaatgaaaatgactCGATTACAACAAAGACGAAACAGTTCCTGC AATTGTGGGAAAACAACAAAAGAGAGCAAGCCTTTTGTCACGAAAAATAA AACCTACGAAACTCGCTCTGGTGTGCAAAGAAAACAAGACGTCTCGAATG GCTTTCAAAAGAATTTGCCCGTAAACTGTAGCACACTAAATCTGAGAGGa aaagttttcattaaaaagatgGAGGGTCCTATCGCAACACTACCACCGCT GAGAAATGGCAAAATTAATGGAGATGGAACAGTAGAATTGATTAAAAGTC CGACATCTAAAGTTTGTAAAAAGACTCGTAAAGCCGTCGTTCAAAATGCG AAAGGAAATGGGCTGATCGATAATACTCTAGAAGAAATGATCACTGCTAA ACTCAAGGTAGATTTTATTGACATTAAtgctgatattttgaaaaaagaag acactgcAATTTCGAATGGTATTCTGACAGATGAAATAGTAAAATCTCTC CAAAACGAAAcgaaccaaaacaaagaaattcaaaatggcgacttAGTAGA AAGAAATGGTGTGGATCAAATTTTGTTGAATGGAGAAGAAATAAAAGTAA AGGAGGAGATTGTAAGTAATGGAAATATTGAAAACACTGAGAACAATCTT AatctaaaatgtcaatatgagaACCTAGATTTAGAAAATGATGAGGATGT AAAACAACCAAAGAAAAAGAGACTAAAAAGAAGGACtgcttttgaaattt tcatgaataACACTATTGATCTAAGTGGAATGACTGTCAAAAGAACTAGA AAAGCACCATCTTCTTTTTCACCTGAATCCCCCCGTAAGGTAAAATCAAA TGATGTTCCACCACAGGCACAACAAATAAAGCTTCCTGTAGATGAACCGG TTCCATATAAACCGGTAATACAATTGACAAAAAAAGGACTACCGTTTAAG AAAAAAGGGAGAAAGCCAAGACTCAAAGGTCCAGTAGAACATTACTTGGA TGTAATTGTTAGAAACAAGttaaaagaaaatgtttcaaatagtAATTGTG ATGACGATGATAATAAAGGATCTGAAATAGATCTAGACTCAAATAATATT ACAACCAAAGATATTGTTGAAATTCCTGATAAACCTGAAGAAATTCTAGA AAACAATCCTCCCTCAGactcatttaaaacaaaaactgtTGAACAGCTGC TATTGCCAATATGTAATGCAAAGCCAATCAAAAATCGTTACCATGatcta aaacgaaaaaatattatgaaaaaacAGCTTagtaaaaagagaaaaacttt CAGTAAAATGGACACTGATGAATTTTCTAGTCCTATCATAAGTGTTTTAG GATATCGTACTCAcaaattaaagaaagaaatgCTTGTCCAGTTTGAAAAT GGAACTAGTAATTGGATTGATTACCATGAGAAGGAATTCAATGTTACAAA AATGAAGGAATATTATGAGCACACTGAACAATCTTTACCGATCATACATC GGCTTGGGTATCAAACATTTTTCCCTTCATCATCTATCTCTTCATTCTCT GACCAAGACTTGTCATCAAGTGATGAATCTGATCTTGATGATGTTTTCTT TAGACCGTTGCCAGCATTGGGGAAGAAATGTGACCAGCTTTTATCAAATA AGGAAGCTCTACAGTCAACAAATAAAGAGGTAGAAATGAGTCTCGATTCA GAAAAAGGACTCAAAAACTTGTGCAACTATGCTTTATCTTCAAAATGTAG CAGTATCTACCCATATCAAAAGATGCAAGAAATGTTTGTTAAGAACGATG GAGACTTTGTGAGCatttatttgagaaaattaaatacaaaagatcagaaa aagggtgatcTTGTCAATCCCAGATGTTGTGAAAAAGTTATTTCAACTTT GGAGGACTGTGCTGTTGATGATGTTTGTAAGGCAGTTATCATCAATGGCA TAGAGGAGTACTTTGCATCAAGCAGTATATTTGAGAAATTGTTGAAGAAA ACACCAGCACTAGAAGGAAAGAAATATGAAGAGGATGTATCAATGTTGAG GTATGTATCATTCTTAATAATGTCCTTTGCCTTTAATTAAAAAAGAGTGG TCAAATGCTATTGACTCTGGCCCTGCTAATTTTTAGATTTGAGATTACTT TAGGCATACTAACTTTCGCAAGGACAAAAAATCGCAAAATTTACGACACT TACTTTCGCAAATTTAACGGAAAAATAATTTTTTCAAGCATTAACTTTCG TAAATCAAGACTTAAAATTGAATATTTTCACATGAAAAAATGGCTTAGAG GCACGAATACTTCTGGTATTGGCTTGAAACATTGGTCCTTTGACTTATTA GTCTTTTAGCAAGCAGGCTAAAAAGTTCCCTAAAAGTTACATTTTATTCA AAGGTTGAAGTTTTACATAAACTTTCGCGAATGGCCCTTCCTAGAATTTT TAAAGACATTTATTTTCGCAAAACAGGTCGAAATTCACGAAAATGGCAAA AGTTTCTGCTTGCGAAAGTTTCTGTCTAAATTAGTACATATAAGAATTTT AAAATTTGATCAATTTTGTTGTAGCTTTGAAGACTGCACATTTTTTTCCA TTTCATTATCATATTTTTGGTGTAGACACAAAATTTGGACACATGGTATC TCGAAATACTTTACTGTGGTTTCGAGAAATAATTTCTCTTCAATTTTTAT TAATCTTCATTCTATTCAAATTTTCTTTTTGCAATGGCTTAGTTGTCTTG TAGTGTTTTCTGAATATCCTCCTTCTTGACCTTAGTATAGAGGCTACTGT TCTTTCTTTTAACTTCTTTGGTATTTTTGGTTCTCTTCTGAAAACTTAGT TGTGAAAAAGGATGAATATAGATTTCACAGCCAGGGTTGTTATTTTATAA AAGCAAATAAAAACTGAGAGAGGTTTTGTCTCTTTGACTCATCCATGCTT GAATTCTTTTCAAGGGAGAGACATATTATTGAAATTTGTAGGTTCAAGGT CCTACTTTCTCTCTACTTGAGTAATCTATTcacatttttttcacattttt acagaacttttttcatttctttttatgatttttctctTCTTAGTTAGAGA GGGATGAAATCTATAAGTCTTTCATTGCTTTCAAAGAAAGGTGCAAGTTT TAACTCTCTTTTACAGTAAGGAGCAATGTTTACGTTGTAttataaaacct ttaagttgaAAAAAAGAATTGCAAGCTgactattttttgttttgattaga aAGGGCTGTTATCGAAAAATGAATGAGAGAGCCTTGATTACTTGATTAGT GTCGAGTTACCATTTCCTCTTTTTACAGTCATACTTCATGCCTCactatt tgaaatttctcatccATTGTTGATTTTAATGACCTATATTTATTACGAAA AAGTTGGTAGTTATAAGCAGTTAATTACATTTATCATTTCATATCTATTT GAATTGAATGTCCATTCAAAAGAATGTTCTGTGTATTACTATATGGAACG ATTATATCTGAAGTGTGTGCGAAAGCTCTCTCATTTTATTATGTATTGAT TTTACagcttttatttgaaatgtaTATTATGGATTTGTGAATCATGTCTT GCTAGCTCAAGTTCTCTCTTGTTTTTTCCTCCCAATGAGAACTTTTATGG TTCTAACTTTATTCTCATCATGGTCTATTCGTtgcaaatcgaaagtgaaa gtcagtcgcttgaaaacgaaagtaaacaACGCAATCGCGTCAAACAAAAT CATTCCGAGAAAAAGTTGCGAGTCAGATCTAAGACGGAAgttatacattt ttttgtttggattATTTTTACAGGTATTTGATTCAAACGATCCGGAACTT CAACAAACCCATCGTAGCCGTTATACGTAAGACAGCGATTGGATTCCCTG CTTCGCTTCTCTCTTTATTTGATATGGTTTTTCACGaggtaaagattttt ttatgataacGTTTTTATCAATCATTCCAAAATCAGCTGATAATactaaa atttttatataattccTCTTTTCACTCCAAGTATAAACATTGGAAGTATT AAGGGGATTTTTCTCTTTTCGTGTATTTTAATTCGTCGTTAAAATATTGT AGTTGTTATGAcgattcacttttttgaatgaTTGTAATTAAATGACCAAG CACGTTATTGCAAGATGTCTATTCTAATGACCGCATTGTTATTTCAAACG ACCCCATAAATAGTGTAATGACCCTTGAGATTTATGAAGCCGGAAAATCT TGTCATAGAGAGAGTGTATTTGCACGTGGTACTCATcaaatgtttatttt ctgaaaggTTTTTGGTATCAGGATTTTCGACGCACGCCGTCTTTTTCTAT GACGGTAAACTGGTTATCCACGCTAAGTATTTGTATTGTTAATATTAATA CTTTTAAATCCTTTATTATGGCATGTTAAAAGTAAAGCATTTTCCTCTAC TTTTATTTCGAACAGCGAGAAACAGAGAAAGCTTCACACACCAGCAAACA ATCAAACGTAGGAAGGAAGAAAACGTTGAACAAGCAACCTTCGGAAGATG TCGAGGATAGCGAGGTATCGTGCCCTAGTACAGAAACAGAATGCCAATCT TTTGTGTTTCCAAGGTTGATGGGCTTGACTCAGAATAACGAAAGTCGAAT CATGGGTGAGGACACACGGCTTCTTTCGCCTACAGATTGTACGGAAAACG TCGATTGTTTGAATGAAGCGCCGTTATCGCAACAACTTCGAAATAGCCTT CGTCACATGCGCTCCAATAGTAAGATACAAATTAAACGACGTGGTAGGTC CCAGTCGGAGATCTCAGAGCCAGCTAATGATGAGGAATCAGGCGatgagg aggaggaggaggttGATGACGTAATGTTACCGGCACGTCAATCTAATCAT TTGGAACAGTTAGAACGATTGGAGAGGGAAATTCTACAAGAGAAAGAAAG AACTGAAAAGTATATGAGCGAGCTTTTCTCTTATATGAATTCACTAGacg aatgaaaatgatttttattgaTGATGATGGTTGGAAATAAACGTTTAAAA TGGTTAACAATGCATTTTTACTATATAGTTAGGTTTAACAACAATAActa tttttagttattttttaacaaattatttatttttcttgataCGACGCAGT TGTATTTAGCCTGTAGATAGTTTTTTTGGCTGGTTTTTACGCAATATTTT ATTGGTTTTATTATTAGTGATGTTTTAAccgattttttttgtgattttct gaACAGCCAAGGGTCAAATGGAAGCATGTCAAATTTTGGTTTCcagagta cacgttttttaataagaacttcCAAAATTCTTGGAGCCTTCAGATGTTTT TAACCTTTTGAGTTCAAAGCCTAAAgattttcttaacatgttcttaattt ttgcccattttcctaagaaatctgTAGAGAagtctgtaaagccttaaaat gtcctTGGCTTGTTCTTGGACATTTTTGGTCATCGAAAccgtatgttctt atatagtttgtttttataaaaaacgtgtatgctctCTCTTCCTACCTTGT AATTTTTGTTAAcctttgattgaaaaatttcggaAAGTCTAGCTCTAAAG TACAATATACCAGACAACGTTAGCGAAGTTTTCTGTGTGATCAATTCAAC AGTAAAATATAGGCTTCCACCCTGGCAATTTAATTATACGCCCTTATAAG GGtggttttgttttaaatgtacaGTTGTTATTATTTTGATGGCTATGtag ttttacattttatttGGCTACTTGTGAAATACTGTAATAATATAGATTCA TTTTATggatattttgttttcattttgaagaaatcCTTTGTGTTTAGAAA TTCTGCACTGATAGATCAATTTGAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00047871TCONS_00047871Clytia hemisphaericatranscript
TCONS_00047872TCONS_00047872Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00047872-proteinTCONS_00047872-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_139supercontigscaffold_139:188518..194742 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.51 4.15 6.83 6.99 62.1 43.44 30.4 34.01 14.54 15.2 10.4 11.48 12.03 11.37 9.58 12.39 11.83 13.17 5.98 8.67 10.17 10.24 6.96 7.72 50.39 39.29 19.32 11.84 8.44 8.86