XLOC_030469 (gene) - C. hemisphaerica

Overview
NameXLOC_030469
Unique NameXLOC_030469
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_139:239977..247259+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030469 ID=XLOC_030469|Name=XLOC_030469|organism=Clytia hemisphaerica|type=gene|length=7283bp|location=Sequence derived from alignment at scaffold_139:239977..247259+ (Clytia hemisphaerica)
aaagatttgaaagattgtttcagagGTCTGGAATCTAAATTATGGAAAGG TGAACTACGGCCATGATAATTATTATTGCTCAATATGGAAAGGCCTGGGA CCAAAGTAGGTTGTAGATGGAAACTATTCAAATACTGATATTTCGTATTT CAAATTCAGTTCACATCGTTCAGCAGATCTGATCATTTGAACGGGCAAGG TTTTTTATCATTTGAACGGGTAAGGGTTTTTTATCATTTGAACGGGTAAG GGTTTTTTATCATTTGAACGGGTAAGGTTTTTTATCATTTAAACGGGTAa ggttttttatcattttaaagaaatttgtaaACGCCTGTTTTATCTCTTGC CTGAAACATCAATTTTTGGATTCCGAAAATCTATACACCTTTACGACCGT AGTCGCggggtcaggcgcgtgccacttattTATCTAATTATCCCAccaaa ctcgatccaatccttatttgacacatttttctattgtctaagtccgaaaa aaggactgggacgtttttagtgggataaagcggacaaaaaaatacccACG CGGCAATTTGaggctacggtcaaaaaggtgtatttccTTATGTAGATAAC ACTGGGGCAGAAACGGAGGAAAGGTTCCTCGATTTTGAAACTATCATTTG TTTCAttgggataatcagatggtttcagattttttgcctGTAGATTCCTT CAATGGTTCTgagcaaaacctcaaaatattttttgcttaactcttttttt aaattgaacaTGCCCACGTGGTAAtcggcggctacggtcgaaaggTGTAT TATCATACCTCGACTTTGGAAAAGACTTACGCAAAAGGATATGGAGGCTT CGCTCAGAATCAGGGATAAGAAATCTAcaggtaaaatatctcaaatcatC TGATTGTCCCTTTAACTTTCTTTTAAGGAGAAGCAAATATGCGTTCGAGT GTAATATTAGTGGTGGTGGCGTGCTTTGCCCTGGCACAATGTCAAGCTAC CCCTCGACCAAAAAGGACtagaagaaagagaaaaacgCCAGCTCCTACTG AACCTCCGATGGGCAAGAATGAAACAGTTGGTCagctttttaattatttt tttatatatatatctGTAGTGTAAGGTTTTTGAGTCTTTTTAATCAAAGA TACCTTTCAAAGGGCTTTACACGATATATGGATTTACTTTACTCTAGGGT GTTTAAGACAACGGAAGATTATACCTTAAACGAGCCAACCCTCTCTGATT CTTGCACAAACGCACAGCTCTTCACATGTTCTATTAAACGTCAGGCAATA ATCATTAACCCGTTCGACTGGCACGTCTGTAAAATAATATACAGTATCTT CTCAAAACCCAGCTNCTACTGAACCTCCGATGGGCAAGAATGAAACAGTT GGTCagctttttaattatttttttatatatctcTGTAGTGTAAGGTTTTT GAGTCTTTTTAATCAAAGATACCTTTCAAAGGGCTTTGCACGATATATGG ATTTACTTTACTCTAGGGTGTTTAAGACAACGGAAGATTATACATTAAAC GAGCCAACCCTACCTCTGATTCTTGCACAAACGCACAGCTATCTTCACAT GTTCTATTAAACGTCAGGCAATAATCATTAACCCGTTCGACTGGCACgtc tttaaaaattatatacaGTATCTTCTCAAAGGGCTTTCTTTATTGTGTTT CCAGCTTATTGAAAGAGGCTACATGCACTCTTTATTTGAAATTACTTTAC GTTTAGATTACTTGATGAAAGAGGTTAAAACATTGAGAGGTCAATTAAAC CAAATTTCCAGACAATTGATGTTGCAACAATTTTTCACTGAAGAAAAGAT CAGAAATGAAGGATTCTCTGGTATTAAACAAATCAGAACTTCTAAAGGTA ACATTGGATTTACAACTCTTTCTCAAAAATTCGTCAAACAGGCTTTTTCG CCTTGCCTCAGTACCCCCACTGAACTTTGAAGCAAGAAATAAAGACTTTT TCCTTCTCCAATGTTTCATGTTTTGAAGCAGACATAAGAAATCCCATAAA AATTCTAAATGGAATATAAAATGCAAATTGGAATGGTTTTAGAGTCAGCg ttctcatttttttcattttcacttttgattAGGCATGAAATTAAATTTCT TAGTGGGGttgaaatgttttcttttcatcgggatgttttttggtcaattc ttTTACTGGTTTGGggatcctaccgggtctgtgaacTACAAGTGCCTaag ttttttctggaaaaatgcTTCATATCGGATTCATTTTAACTTAACAGATA TTGTATGAAATTAGAATTGTCGAAAAGATCAAATTAACTTTGGTTACAAA AATCTTATGAAATGAAAGTTTTATGAGAAGAAATTCTCTAAACTAAAAAA GTTTGACGAAAGAATTTCAATAAtgttaaaatttgatgaaaatattcaat aaacTAAAAGGGTGACGACAAAATATTTGAtcaatttaaagtttgtatat CGGATCTTTAAAGTAAAAGTTTGAAGGCAAAAAAGTTCATCAGCTAAACA TTTGACGAAAAACTAATTTAATCAACTAAAAATTTGACCACAAAAAATTC AATCAACTAAAATTTGACGGCAAAAAATTCAATCAactaaaaattttaat gataaaaaattcaaccaactaaaaatttgaccacaaaaaattaaattaac tgaaatttgacgacaaaaaaattcaatcaacgAAAAATTTGACgacaaaa atttcaatcaactaaaatttgacgacaaaaatttcaatcaacTAAAAATT TGACACCAAAAAATTCAATCAACTAAAAATTTGACGACAAAAATTTCAAC CAACTATAAATTTGACgacaaaaatttcaatcaacTAAAAATTTGACTAC AAAAAATTCAGTCATTTACAAACAAAATTCTTCAactaaaattttgctga cgacaAAATACTGTAAATGttcaaaaatttgatgacaAAAATTCTCTAAC TAAAAATTTGACGACGAAAATATTCACCAGCTAAAAGTTTGACGACAAAT AATTAGTCAATTGAAAGTTTAACAAAACAAATCAACCATCGACTTAATTA TGacaaaaactctaaaaaaaacattctacaaaaaaatcatggaaaattAT CCTACAGTTCAGCCCTAGTGAGAAATAGGTTTCATcccattttgaaattc aaaagaaaatcatccACACTGGATTCACAGTAATATTTCTATCCCAATTG AGATTTCGacagaaattttcattcccTGTGGAAAAGATTCTAACCGGGGC TTTGAGAGGTGTTAAAAAATTTACCCCTAAATaataaattttctcaaaag aaaaattgacgaaaaaaattcacaaaatcaaAGGGTAAATAATAAAGGTT TCACGAAAATAAAATCCACCAGAAAAGCCCCTGGCACGAGTTCCGTCAAT ACACTTGACTAAGTattattaaaaattatttgagATGACGGAAAACAATA ATTTAGGTCCAGATTCTAGTCAGAGATTGGCCAAATGTTTCGTTAAATGT AATCAAAAGGCTTTCGGCTTTTTTACACCAGATAGTCTCCCCTTTGAAAG CAAtccaaaagagtaaaaaatagAATGTTCATTCGTTTAGGGGGCTTAAA GAACTATTATGGCAACACACAGAGTGGATCATCGTATTGTTCCATTCACG ATCATTCAAACAACATCCGAACAGTCGGTATGGGAGAGTTCATCGGCGTC CTTAATGGCGTCGAGTTCCGAACAAGACATAATGATTTCCGTTTGAATCA ACCTCACAGCACTAAAGGAGATTATCATGCAGTAAGTCAACTCATACAAC TTTATAAAGTTTCTCGATCTCCTACCAGCCAACGAATACTGTAACACAAA AGTGTAGTGGCCAAATGAATTAGTTCAAATCTAAAATGAAGTTCAGTCTC ACCTTAACATCGGTTACAAAACGTCAATCATATATACCGAgcttatattc atgatatgcaccattgcaatgtcttccacagaccaaacagctgattggtt ggaagtgacatATTGACtgtttttacgtcacttacaaccaatcagctatt gggtctatgattgtaatgtcagaagacattgcaatggtgcatatcatgaa tatgtgtgattttctgcgacggagacggtaaggttctaatttgactacat cctgaccagctgaggacgacggtataTCAGCAcctttaccgtcctcgatt ttgcgggttaGAACTGCAGGTTATTCTATATCGCTTCAGTTaatctaccg tcctcaaaagtgcaagtGAACAAGTAGTATCTAATCTCGTTAATTAACCA CTCCcgtatataaaaaatattgttttcacaCGTCATTACGTATTACCATT GTTCGACATTCATCAAATTATTCTAGAATTTATTCTCGTTGTGATAGCGG TTGAGAAATACTGGTGTAATATAATATGGCTGGGGTTAGGATTGGAGGTG TTGTTACGAAGAATATGAATTATGACTACAGTAGTTCTtggattattttt ctttcttagattgaaccaatcaaattccCTGATGTTCCACCAGAAGTGTT ACAGAAACCTGATATCCAATCACAAATCCAGGAGATGAGAGAATGGTTCA AAGCATGGAGAGATAGTGACCACACTGTACGTGATTATaggaaatatttc aaaccaGTGTTGTGTTATTTGGAAGGTGCATGGACAACCAAACAAGGAGA TTCCATTGATGAACCATTTGAAAGTGATCGACATTCCATCGATGCTGACT CTTGGTTTGATTTGCAAGAAAAGGTGAAAAACTATTTCGTAATTTGGATA TCATTTGTTGTTTATTTGCCGACTAAAATGAAAGtcttttttagtcaaat tacacgcttttttcatgtagaaccagtaaattttgagcGTGTTATAACAA AGATACACCCCTTTGTCACGGACCCGGTGGGACCACCacccaaatgaaaa aaatcgtaTCCGAATCTATCCCGCTGGGTTTTTTACCTATaaataacaat agaattcaTAGGtatcccattgggatttcgatagaagttttcatcttcac tttcGAAAAAAGCAACAATGGGACTACGAGACAGGAGTGTAAATATGTAC TGAAATAGAATATCGTCTACTGGAATAAATAtggtgaaaatttgacaaat ctTGACTAGTATGCCAAGAGGGAGGTCAAATGGTCTCTGACGTTCGCCAA ATAAACCAAGGCCTCCCGATTCGATCCTTGCTCCTTCTCTGTTCCGTTCA TAGGAGATCTAGCGTGTATTTCGCTAAAGGAACATGTCCTACATTATGCT GGGGTTATCCACATAAAATATGGATTCTACTCATTGAGACTTCTGTAAGG CCTACTAAATACGTAGTGTCAACTAGCATGAACTCTAAAATGGTAAGTCC TAAATTATTTTCTAGGGCTGTCTTCGTAAAATATATATCCTAATCATTAA GACTTCGGAAATATCTGCAGAATGAATATAGCATTACCATTGAAAAGGAG ATCATCATTCGTTTCTAGGTTCGATTCACATCATACACTGGTTCAAAAAG TTTAGGAGAAAATTTGGCTTTCCTTCCAACAACCATTATGAGATTCGAGA ACAGCACTCCAGTATTCGCACAATGGAACTATCGAATCTTATGTCATCCA TTGAACCAATCTGTACCATTGACCAAATTCAAACCAGCCGAAGATATTGC ATCACGAATGAAGCGTAAAATGTCCTGGGAACAATACAGTAAATCACGAT CAGCACGTTTTGAATTAGACCGTGGCTTGAACCCAGATGAAGCAATGTTC CGTGAGAAGGATATGGCACGCAATTTCCTTGATAAACTCATGGAAGAGGT TCCCGGTAAGAACAACTATGGTGGAAGAATCGAAGATGCAGGATTTGATG CTGAAGTGCAGGACTTTAATGGAAATGGTCCTCTGGATGTGTCTAGATAT CATCGCTGGTTTAAGATGGCCAACAAAGATGCAATGGGAAGACAACAATC CCACAGAGGTATTCGGAATATgcctttgtttgaaaaaaagagaaaactaa CATGGAgaagtcggcaaaaaaataataatgagctcttctgaaattagaaa aattcattcgagtgataaaaaaatcaatcaGTTTTCACCAATCTTCAATT GCGATTTTTTCCGTCTAGGTTATGCTGATTCCTACATGTTTGCTGCCAAG ACAACACAAAGCAGAGTCAGTGGATTACACATGAGAGCTTGCAGAAAGGT CAAATACAAGGACGGTACAAGAAAACTCATTTGTGAAAACCGTAATGAGA AATGGTCGTATGCTATCCCCTTGGAAATTATCTACATGACACCATTGAGT AAATGGAATCCATATGGTATCAAATACAACCCTAATTGCGCTGGTTATGA AAACACTAATGATACACGAAAAGGGACAGGATTGTGTGCTGATTATTCCA GAGCTAAGAAACACGCTTGTGATCGATTCTACTATATCACACCAAGTGAA TTCTTCAGTGCCAGCAGTGAAGGTGAAAAAGATCCCGCTGATACAGCTAA GAAGGGTTTCTGCATGTTAGACAGAGATGGCAATGGAGTTGTTGCTTCTC CATCTGGTACTCGAATCATGTTCCCTGAAATCAAGGGGGTTGGTAAACTC AGACAACGCTTCCCAATCTCACCAATTCATGGACATGGAACCCCCGTCTG GAAAAATCTGAATGCTCTTGCTGATATGTTTATGCATAACGCATCCTACC ATTTCATGAAAGTCAATCCAAAATCAGGCGTTGAAGAAATCGAATTCACC TACATGTTGCAGACATCCAGAAATCCTAATGTCACACCACATGAGCATTA CTTCAGCTTGGTCAAATCACAATTCGATAAATTGGTTGCAACTGGTCGAC CAATGGTTGTGGAGACTGATATTCGTGAATCACATTCTCACACTTTAAAG ATCAAATGGAACAAAGTTACCAAGCAACTCCAATATCTCAAATGTGGTGG TCAATCATTGTGTGGAGATGAACATCCAAAGCTGTTGGTCAGATCTACTG ATTAGAAAGAGATAGAAgtgacttttttttctttttaccatATACTCAGC CATAAAGTATTTGTCTATGTAAGAGATATATTCAAAGATATATCAACTTA TTTTTCAGAAAGACTAATCATATCCTAAGAGCAAGAATTTGAAACTGAAG TTACCTATGTTTGTTTATTATTCAATGCGGCCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00047873TCONS_00047873Clytia hemisphaericatranscript
TCONS_00047874TCONS_00047874Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00047873-proteinTCONS_00047873-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_139supercontigscaffold_139:239977..247259 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.02 0.05 0.02 0.07 0.52 0.45 0.44 0.65 0.42 0.23 0.41 0.56 157.74 159.35 150.95 368.49 44.71 59.19 419.53 376.46 304.87 328.81 132.41 218.61 331.22 326.32 0.09 0.18 0.17 0.12