XLOC_030494 (gene) - C. hemisphaerica

Overview
NameXLOC_030494
Unique NameXLOC_030494
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_139:553207..560188-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030494 ID=XLOC_030494|Name=XLOC_030494|organism=Clytia hemisphaerica|type=gene|length=6982bp|location=Sequence derived from alignment at scaffold_139:553207..560188- (Clytia hemisphaerica)
ATCATTATTACTCACCACGTGGGTAGCCATCTTCCACGTGACTTGGTCCC AGTCTCTTGAGATGACAGACGCGTTTCAAAAGAATCTGTGTCATGATAGG TGGTCAGTCATGGATTGGCAATCTATTATAAGACCATGTCGTCCGTACAT GCAGTTCGGGACTGAAAAAAGAAGTATTGAGAAATACAGAACAAGTCCGA AATGGAGTCATACGTTAGGTGAGTAATCTCTCAGAAAGTGTCAATTTATT CCTCAGTTAATAAGACGTTAATAGAATGAGTTCGTTGGGCTATTCGTGTT GGAACTTACTTTTAGTAATAAGCCAAGTTTGATTTTAAGTACCTTAAGTG GATANAATTGCGGTTTTCTCGGGGATATGTACATTTTGCGAATAGGGAGT TTTGAATAAAGATAAACGATTAAAAAGGAAGGGGTAGAAAAACATTTGTA CATTATGCCTTTCCGTCAAATATATTCTTAAATTTTCAGAGATAACGCAC TAACACTATCCACATATCTCGCAAGCTCCCCTTCAGCACACCTGTGCCAA AGACCCAGTGGGACACTCGCTTCACTGAAAAGTTTAGCCAAATTTTCGTC CCTAGTGGAAAATTTCCACTGTAGTTCCCCACTGGGAAATCGACTTTGGA AAGAATTGGAAAAAATTGCACTTCAAAACGATCCCACTTGATTTTTGAGC TTGAAACAATAGAATTTCCATCCCACTATGAGAAGAAGTTCAACTATGGA GCTTTGAAACAGGGGTGTTTCAAACNTTTCTCTTTTTGTTAAATTTGGCG GGGATTTAATTTGGCGAATTGCCGAATTTGGAAATTTTGGCGAGGATTTA ATTTGGCGAAATTTGGCATAATTCGCCAAATTCGCCAAACTCGCCAAATT TAATCCCCGCCAAAATTTATCCACTTAAGGTAAGTTTTTGGCTCGCATTT GATCAAATACTACAACTGTTAAGTTGACCTTATGTCTGCTTTTTGCCAGA AGTATCTAAACGTTTAACACTTTTACTGCGGTAATGAATTTTGAAATTTG AGTATATGTCAGGTTCTGGTAAAATAAGCCTTTAATCCAACTCGCATGTT AACTCAAAGCTCAAATAACATTATGATCGAGTACAATTTTTTAGTTTGAA AATTTTTTAGGTCTCGACCTTGAGAAGACTGGAGTATTCAATAAAATCAC AATCCAAACACGAACAGCAGATGGTCACAACAAGCAAGAAGGAGGAGATA CATGGCGTGTTTTTGTACGCGGTGCTGATCGTATCACACCCTCCATCACA GATCTTAATAATGGTGTATATGAGACAAAGTTTATAGCAATGCAACCCGG TCACTATAAAGCTGAAATTGTTCTAGAGTCAACTCTTTGTGAAGCATTTA AAGATCCGCCACAGGATTGGTTAAAAAGAGGTTTGTAGTTTGATTGACAA TACAGTGTTCGGTCCCATAAAAGATCACGCAGATGATGATCTATTCGTAC CTCTATTATTCAAATACTTCTATAACTCGAACTTAAATATTAATCCCATC AGCCAGAAAATAGTGTTAAATACTCTCTGTAATTCGAATCTTTCACTGAT TTGATGAAAATTCCGGGTCTTTGAAGATCGAATTAGAGAGAGTTAACCGT ATTTTGATTCAACCGAACTCCCGATCCCTCTATGGCTTGCAAAATAACCG AAACTGATATTTTCTGATGAACCTGCGTTAATAAACTACTATATCTCTCC TCTTCAGATTCTGCCATCATTATTGGTGATGAAAAGAATTCCAAGTTGCT ATGGGAACCACTGAGAGGTGGAAACATATCCTTCAAGATCGAACAATCTC CAAAAAACGTCACACAAGGTACATTTAAAAAAAAAGAACCTGAAACATTA AATGGATGACAAGATCTCCAGATCTTTTGGCTCTATAGTGCCATGACAAA TTACATTTTGCTTTTTATGCCTCCTTACACGATTGAGTTGATTATTCCTC TTGAAAGCGTTAAAGTTGGTAAACAGGTGCAGTTAGGCTAGTTTGTCTCC TTTTTTTTTGCAATCTGGAGTGGAAAGACGAAATGTTTCTTGAAACTAGT CGCTTAAACTACTCAGAAGTCTGACATGGGAAACAAAAAGAACGTCTTAA AAAGAAATTAATAATCAAATTTCCAGTATGAAAATTAGAATGTTATATAT TCCATTTTTAGATTTACGGCAAAACTTGAAACGATGGAAAGAATCATGTG GTAGACAATATAAATGTGACCCGTTGCTATGGAAAGGATTTGGTCGTTGG GTAAACAAAACATGGACACCGTATATCGATGGTGAGACAAATTATTCTTT TGCAAAACGGCAAAAAAATATTTTCACTACCTACCCAAACCCGATTTGAA ATTTAATTTAATTTGACTGTTTTACTTGAATGTTAATCCAAGTACATTGA ATAAACTTTCGTGTGTGAGCATAAAACTTATGAAGATTAGGTTTAGAAGA AAGGTCACGAATAAAAACTTTCGCGAAAAAATATTTGACGAAAAAAGGGC AAATTCTCCAAGAACCGCGAAAGTGTCAACCTTGAAGGTTCAAACTCTTA CATATAAACAACACCACACTAGTCTTTTTCTACTAAAATTTCCACCCAGT GACCCTCTCCGCACAACAATTGAGATATATGTGTCTCTATAGGACTATGA CATAGTTGTCGTCAACAACCTATTTTCCTCTCTCTCGTAGACGAGATTCT TGAGTACAACAATGAAGATGGTATTGAATCATGTTTTAAACACAAAGAAG GAGTGTTCAAAATGGTGGGTGATGAGATGACACAAGATCTAAGCGAACGA TTGAAAACCAAAGACTTGTGTAAAAATGTTTTCAAAGAATGTATACCGTA AGAAGGGTTTTAAAACCTCTTAACAAATTCTGCCTGATATTTTTGTAATA TTTTAAAATTCAAAGTGACATAGTACATAAGCACCTGCAACATATTATTG ACCTTTGTCTAGCAGTACTGAATGTAGTAGTAGTAAGTTTTGCGAGCTCA AATCAATCACTGTTATCGTGTGGAGAAATTAGCTTACGCTTTAATAAAGT ATTTTCAAAACGAAATATACTAATGCTATTTCCAATAATTAGATACAAAG ACGATACATCAGAAAAGAAAAACATCACGCCACAAAAGACTTTCTCTACA GCAATGCATCTTAAGAGACTCAAAGAAATGATCTCCAAGCCTGAAATGGG CAAAGAAAGCGGTCTTTTATTAACATACGGGCACCCATTTGTACGGAATT TGGGTTTCAAGAAATACCGAACGTTTATTGATCGTGCTGCAAAGATTTTG AAGGAGAAATATAAAGGGAAAGCTGTTTGGAGAACCATTTCAACCAAATG GAGAGATTCAGAAGACCCGAACAATCACTTCAACAATCACCAGGTGAGAA ACATGGTGACTTGAGAAAACACACCAAAAGGCTCTCTTCTTCCTCGACTC TATCCTAGGATTCTATTTTTTAACTGAACTGACCAATCATTAAAAGTAAT CTCCTTTCCCAAACCATGTTCGCACGTAACGGTTCCGTTTCGCTCGGAAA CGAAATGGAGCCATTCTATTGGTCAGAAGTGGCGTAGTAAAACTTGAATA TAACCAATAGAATGGCTTCATTTCGCTTCGGAGCGGAACTGAACCGTCAG GTGCAAACGTAGTCTAAGACGTAAAATGGAGGATATTTGATAAAGTTCAT CATTATGAATGAGAGCAAGCTCCTTGACGGGAAAGAGAGAACATTACCAT TCTATGGTTATAATTTTAAGAGCACCATTCGAAGGGTATAATTGAAAATT TGCCGAGAGACCACGCCCCTTACGAGACCGCCAGGATCCTTGAAAACCTA AATTGATTCTTCCATTATTCCTTTTTTTCAGCGAGTCAAATTATTCAACG CGTATGCAACATCAGCAATGTGTAACAACGGAATTCCCGTATTAGACGTC TTCCAAATGTCGGAATCAGCCCCGAACGGCGATCGAAAATCATTGCTGAA AAATGTGGAGAAAATATTGACACAATATTATAGACGGAACCCAGCCAAAG CTTGTATGAAAAGAACTGTTAATAAGAAAAAAGCATTGAGTTCGGCCATG CTTACAGATATCACTAAAATTGGAGCAAAATAAATCTTATTTGTTCGGGA TGTCTTTAGTAAAAATCGTTCTGCTTAAAAACTTTTCTTTATGTACAAAT TTAATATTTCTATAAAAATCATTAAAAAATAATATTCATTTCTGTTGATA AGGTCCCCCCTTCTTCTACATATTGGTTCGACAAATTCGATTGATCGGGT CTGGTCTACATTATGTTAGTTTGCTAACCAAAGGACAATAATATTATGTT AGTTTGCTAACCAAAGGACAATAATCTTTATTACTTCAATCCTAAAGATA TACTCAAGTTCTTCCAGATCTTCAGAAATACTCGTCAGCTTCTTAGTATA ACTTATTAGAAGATAAGCGAACGGATTCAGAATTATCTCAACATTGAAAC CTCAGGGAAATAGACCTATCACCCCTAACAAAAGGATTGGGTCCGAGTTT GATTGACTTCAAAATGTAACCAATCCATGGCGTTCTAAGTCGAAAAAGGC CCCTTGGATTTTGACGTCAATTCACGTTTGCTATGCCTTAGATATAGATC GCCATGAACCAATCATTACTAACGGACTCAAATGTTTTTCATTCAACCCT GGTAAACTCGAGCTTGATTTCTTTTTTATACAACTTTTGGTATAAGGGTT CGTTGATATGTGTAAGCTCTAAGCTCTGCTTTAGACAGCCTTTCTGCCCT TCCTAATTTAACTGTTAGAGTAGGCAAAAATTTGGCACAAAGTTGACAAT TCAAATCTTTGTTGAAGTCATTTTATTGCCGCCAAAATAAGGCAATGCAT TGACAGCCGACTTTCTAGATTCACAATGAGAATATGTAGGGCGAAAAGTG GGCCGTCTCAACCAAAGCTAAGAAACATTCTCAATAAAAATCGTTTCTTT CATCAGTCATTTGTACCATTAAACTTTCGTGATCATTCTTCTGTTTCTTC TCCTTCCCAGACTTCTTGATCGATCTCCGATAAATAACAACCGTTAAAAT AAGTGTCAAAATGGATGCTAACACACCCGCACAGCCAATCATGTAGCTCC ATGCGAGTTTGAAATTATGCGCAGTTAATTCATTGGAAGATCGGTTAAAT TCGATTCCATATAACATTAAAGTCAGTGCCAAAGAACCGGATCCGATCAA ATGTAGCAATACTAATAACAGATTTGTATATCGACTCGGCTTCCGTGAGA AAAGAATACTGAAAACGGTTGCTAAGATACAACAAACTGTACCTAAGACT GCTCCCATCCGACAAAATTTCATCCATGCTGTACTTCCTATTGAGTCCTG AGCGATATAACATTCATAAAAAGTATAATTTGTCGAAGAATTACATGATT TCCATAATCCCTCGATCACAGTGAGGTTACCATTTTGATAAATCCTCCAG TTCGGTGTAACTATAGAAACAGCGTAGACAACCAGACACAAAAAACATGT GAATGGGACCAAGATGTATCGACAGCAGCATAAACCCATCATTCTATCAA TTCATTTTTCTTGACAATGTATTTTTTTATCAAAGCTAGAAAGTTAAAGA AGTTAATAGCACTCATGGCTAGACTTGCTTTAATGTTTAATAAGTCTCTG TTTCAAAATATATAACCCTATAAATCTTACAAGTAATCAACTAAACTGTA ACTTGAAACTTGGATAAAGTATGTTATCTTTCACATACCTGTGCTATAAC GTTTAGAGGGCCTTGATATGATAGTTAAATTAGTATTCGAAAGAATGAAG AGTAAAAACAATGTCTAGTAGTCGAAATCAAATTCTACTATGCTACTACA TAATACTCTTATAGTATACAATTTTAGATTATCATGAATCCCAGAAGTCA CTTGACTTTTATCTACATTTCTTGAATTCTAAGGTCTAACACTCAAATCG AAATTAAAATATCTTTTAAATAAAAATCTGAATTTGTTGTTTGGTTTTCT CACGACAAAAAACTTTTACTTTAAGACAGTCGAGTGTGTATTTTCTCATT AAGATTTTTGTAATCAAAATATTTTGAAAACAAACACAAAGATTTAATTT GAACATCAATATTAGACCAGCTTCAATTGAATTAGAACAGTACTTCAAAG ATTCCTCAAAAACAAAAATGTAAGCTTAAAGAACCCACGAAGGATAATCA GTCTGACCCCCCAAAATTCAGGAAATGATTAGATTTTCCAGAATAATTTT TTCTCTCTAATTTTAGATTCTGACGGTCCACTTTCTCTCAGTCATAATAA CTTTAGGAGCCCCTATCTGGAAAATTGAAAACCTATTATTAAGCTTTCCC TCGACATCAATTCTCCAAGATTCTCATAAAATCAAAATCAGCCTTTCTAT GTCTACTTTTACCAAAATACAATGTCTCTAAGTATGATTTTAAAATATGT TAGAAAAAGTCATGATGACTGACCATTTTTGGTTTTGCTTTAATTTGAAA ACGTAAACAAATTATTCTCCTTGATTGCGTTGTCTTGGTAAATCTAAGTG AAATCTTGATTGATTTTTTTAATTGTTGGTTTTGATTTAAGTCACGGAAT ACTTTTTGAACTTTTTAACTACATGGTGGTCGTTCGTTGATCAGCAATAA CAAAGGAGGACTAGTATACTTTGGTCACATCGATTGTGATGAGACATCCC AATTCATGATATGCACCACTGCAATGTCTCCTGACATTACATAACGGGCC CAACAGTTGATTGGTTGTAAGTGACATAAATCAGTCAATAATACGTCACT TTCAACCAATCAGCTGTTGGGTCCGTGGAAGACATTGCAATGGTCATGAA TAGGACCTTTCCACTGGAAAATTGGCCAATAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00047925TCONS_00047925Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00047925-proteinTCONS_00047925-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_139supercontigscaffold_139:553207..560188 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.07 0.1 0.13 0.16 0.91 0.71 4.05 4.59 1.81 1.1 3.45 3.79 3.62 3.07 2.81 5.58 5 4.19 1.99 1.61 3.74 3.86 2.28 2.62 3.31 3.54 0.54 0.25 0.31 0.3