XLOC_030556 (gene) - C. hemisphaerica

Overview
NameXLOC_030556
Unique NameXLOC_030556
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_14:50336..52238-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030556 ID=XLOC_030556|Name=XLOC_030556|organism=Clytia hemisphaerica|type=gene|length=1903bp|location=Sequence derived from alignment at scaffold_14:50336..52238- (Clytia hemisphaerica)
AAAAAGAAATGTACCATGGATGATAGTGATGATGACGACGATGTAATCCC
ACCGACTCCTCCACCATCGTAAGCTGACATAGAAAATTAACTAATTATCA
AAATGACTGGATTATGACTTATTAATGTTATTACCTTCAAAACAATCGTA
CTTGCATGCATGTGGTTAATTTTTTTCATTAAATTAAATTTCTTTTTGAA
TTCATTCAGGCCATCAAAATTCAAGTCATCAAACTTCAAAACTAAAAATG
AACATTCAAGTAAAGTAAGAACACCTTTCATTATCCCTGATCCACCCTGC
CGTTTCTTGTTGAGTAGGAAAAGAAAGAGACACATTGTGTCAAATTTGAA
CTAGTCATTAAAAAAAAGGAATAGACATTTTAAGGATTAGACATTTTAAG
GATTAGACATTTTAAGGATTGATTGAAATTCCCCATGTGATTTTTTTCCA
GGAGACACTTTCCAAAAATGACCCCATTCCCTACGTCCCAGACTTCAAAA
TTGAATGGTGCGAAGTTGAAGGAGTGACAGAACTTTTCGAAAATAAGGTA
CACTATTTTTGAAAACTTTTTTCCTAACGCTTCCAAGTGATTGTTTGCAA
TGCAAGTGGCAAGTGGTATTCAAAACCTAACTCTTTTTCAAACTTCCTAT
AGTTGGATGAAATTGAACTTGTTCAACTGGAGGATCAAGGTCAAAGCCTA
CCAGTTTCACTGTTAGAGGTAAATATACTTTTGACGAATCAGTTTTTCTA
TTCCCACGTTATTGGGATGGAACACCCCTTATAAAATGGTTGTTTTACCA
AAACTTAAAAATCAAACTGGGTTCAACCGCCATCTCGAGAGTGTTGGCTA
CTTGTATTGAGTATTAGCTTGATAAATTTATTCCTGCTAATCGAACTCTT
AAAATTCAAATCCATTCTGCCTCGCATATCTATAGTCATAACGTAACGCT
GTCACTCCTACAATTTTATTGCTACTATAAACAATTTACCTGCTATTATA
ACCCGTGATAATTAACCCAGTTGAATCAAGTATTCAGTCTTACGGTATAA
CCCTCCAGACTTTCCAAGTATATCACTGGATAGAGAAATTATATTCAACT
TATCCATGGTAAAGTTCAGATATTTCAATGCTAGTAAAATATCTTTATTA
ATGTAATGGATAAATTTCAAAGGTATCGCAAATCGCCCTTCATTTTTGAA
CTCTTATTTATTTACGGCAAAATGGCCAGTTCTTTCAAACAACAAAAGAA
TAAACCTTTGCGAGTCAGATTTTTATGAAACTAGATTTTGTTAGTTTGAC
CAAAATCACGAGTTTGTAGAACCCCTTAAGTAGTATTTGTTTCAATTTCT
AGGAAAAAGTTGAACTTAATGTCGATTACTCAGTACACAAAGAGGTGGCA
AAAGTGATGGATGTGGAAAGGCGGGAGGAATGCATGGACAAGCAGGAGAA
AGGTGTTGACAAGCAGGAGAAAGGTGTTGACAAGCAGGAGGAATGCACGG
ACAAGCAGGAGGAATACACAGACAAGCAGGAGAAATGTGTGGACAAGCAG
GAAGAATGCGTGGAAAAGCAAGGGAAATGTGTTGACAAGCAGGAGGAATG
CGTGGACCAGCAGGAGAAAGGTGTGGAAAAGCAGGAAGAATGCGTGGACA
AGCAGGAGAAAGTTTTGGACCAGCAGGAGAAAGGTGTGGAAAAGCAGGAG
AAAGTTTTGGACCAGCAGGAGAAAGTTTTGACGTCCACCACTGTGGTTTT
TAAGGTGTTCCCATCTTTTTTGGGTAGAAACTGTGCAAAGTTTCATCTTA
AAAATTTTCGACTCAAAATGCTCCTAACAATTGCTGCACGGTCTTTCATG
CTTCTGCAATCATCAGGCAATAGATCTTGTTCTAAATCTTATCTCAATTC
ATG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00048024TCONS_00048024Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00048024-proteinTCONS_00048024-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_14supercontigscaffold_14:50336..52238 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.11	0.22	0.26	0.06	0.76	1.03	0.44	0.34	0.19	0.3	0	0.34	0.04	0.23	0.39	0.1	0.21	0.3	0.12	0.19	0.05	0.32	0.19	0.18	0.3	0.54	0	0.08	0.13	0.26