XLOC_030726 (gene) - C. hemisphaerica

Overview
NameXLOC_030726
Unique NameXLOC_030726
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_142:85980..90859+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030726 ID=XLOC_030726|Name=XLOC_030726|organism=Clytia hemisphaerica|type=gene|length=4880bp|location=Sequence derived from alignment at scaffold_142:85980..90859+ (Clytia hemisphaerica)
GTCGCGTTTCTCTCTTCTTCCATCATATTACGACTTTGTATGGGCCATAC
AAAACGAATAAATAGCTTTGCCCTATACCAAATCTTCAGCAAGAACTTGA
AATCTAGTGATAAAAGTTATAAGCAGGACAGATACAGATATTTTCAAGAG
TCACTAATATGTCTTCAAAGTGGACAGAAATCTTTGTATTGATGGCTATT
TGCTTATCTTTCATGATTCAAAATTCAGGTAATCAAATTCAATTAAAAGC
TTCTCATATAGATGATTACTTTAAGGCTAGAAAGAGCAGAATCCGGAAAA
AACAATAGACCAAGATGAGGCGATTGGCAGAAGATAAGTAAAAAAATCTG
GTATTTTAAATTTagtgatatttttcaatttaagtAAGTAGAGTAAGTAA
GTATGCAACCAAAGTCGGAGGCGAACCGAAAACTTCTATTTCGTTAGCTG
TCTACCTGGCAGGAGAAGAGGGGAAGAGCAGGGCCCTACGCTCTCCTTAC
GCTTGATCCTCTCTTAATTGTCGAGCATCAAACGTAGAGGCATCGAGTAC
CAGGGGACAAAGATTTTTGGTTGCGCTtccttagactctatattcATTGG
CCCtgcactttcaatttcatgtcGTGGGCCCTGAGTACGAATTTGATATC
GTTAAAATCTTTTCAATTTATTTACAGATGGATATACATTTTCCCGACCA
CAAGAAAAATGTTCCGATGAAGAAAATTGGATTTGTGGAAGTGATTTCAA
AAGTTACAGAAATATTTGTGAATTCAAGAACGCCGCAGACGAATCACCTT
TACCTCTGACCATCATTTTATTGGGTAAATGTTGAATGATAAAATGTGAA
TTTTATTACTTAGCTTATATTTAGCTTTATTCTCAAATATGGAATTTTGT
AATCTATTTTCCGTTGATTGTTTAGTAAATAACAGTGTNAGCTTATATTT
AGCTTTATTCTCAAATATGGAATTTTGTAATCTATTTTCCGTTGATTGTT
TAGTAAATAACAGtgtactgtgtaaaaaaaacTCCTTTATATTTTACAAT
TATGAGTCCTTCATGCCTCGtgtcaaattgaaatattatgCGTTATTGTA
CGACAAACATTCTTGTGACTAGGGTATGTAATTTAAACATTTACATTTAT
CGTCCACCTCTAAGCAAAACGCactgtcgaatatttttagatatccgata
GCAAAATATCTCTTCTGTAGCAGCGAGTATCAAGAAAATAGTTTNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAATTGGTGAAC
GATAAACCATATATTCGAcgtgaaaaatcggatatcgaaattaTTCAGTC
TCGCTTTAATGATATTCGACTCAGCTTCGCTTCgtcgaatatcatcaagc
tcgACTGAATAATTTTCGATATCCGATTTTTCTTGTCGAATATCTGCTTA
ATATTCTGAAAAATATGTTatctaaatttaagatttccaCACAATATGTT
GCGACGAAAATGTGatatgtactagttatcgcatgacttcgagtgcaaaa
AGGGATATAGTATTTGTGAATTAGAAAACCTGCAGAAGAATATTCGAAGC
AGCTGACTTGGGAAAATTTCGGGTTAAACTACAGTTGAAAGTCGCGTAAA
TATTCACAATGAATATCAAATTATCATTTCATCAAGTATAATAAAGTACA
GTTTCGTATAATTTTCATATGAGAAAGATGCAAATATTAGAAAAAATACG
TTGGGAAAATGATAAAGGATTTGCAtccttgaaaatttcagatGTTCAAG
TGTATTCTGGATTTTTATCGATAATCTAGAAACATGTTAAAATTCAAGCA
GAATGGTGCTGCCcacttaaaaaaaagaaataactaCCTATATATCTCAA
TAATTAAAATTCCCTGAAATTTCATCACTTTCTCTAACTTAAAATTAGTA
TCCCTTACGGAAACTAAATGCTcgtattccattgaaaacgaatATAGAAT
Gcattaaaatagaataaaattctaggttcaaaactttgatgaatttctaa
tTCATTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNaatacatttatttttttcgaataatttgG
GTAAATTGCTCTGCTCCATTGATAATTGTAGCAAATTAGTTAGCTAAATT
GTTTTGTGTATTGGCGGTTTAGTTTGATCAAATTACGAGCAATTAGAACA
CaaaagatttgagaaaattgatgtttaaaagttttattttaacaagCCAA
GTTTTCAGTTGTGTCAGTCACATGTCCGTCAGGCCATGAGCTATGTTAGG
AAGAGTCTCTCTTCTTGGCTTAAATTCTCCAatgttatttccaaaattta
tctattaatatttattttctttctaactTTCAGGTAAAACCATAATATAC
CGACGGAATACGGACACACAATTGAAGGATGATTAAAATCACGATATACC
AAACAAAAGACGAAGACGCCatcttattttcaaatttttaaatttttttt
taaatttttaatcttttattagaattttcgttgtaaattttaactttaat
tttGTTTATTCTACTAAATAAAATATTCCATTTGCAAGTCAAACGATTAG
ACTTGTATCCTGTATCTCAAAACGCAGTTAATCTGAGTGAATATTAACCA
ATAACCCATCGAGTACAGCTCAACAATGTATACCCCTTACAAGCATCGAT
AAACCTcggaaaataattaaaaaatgccCCGATAAAATCCCTATAAAGGA
CCCGAATACTGGTAGTGGTATtcttacaaagaaaagaaaaataatgcatt
acAAATTCTcgattcttatgaaaaatctttcttatAAGAAATATTTCGGA
TATtgaaaaggcattttaaatttggattttcaattcatttgaaaTCTTGT
CCGCTATTTAAAGTGCATTTTAATTTTGAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00048270TCONS_00048270Clytia hemisphaericatranscript
TCONS_00048271TCONS_00048271Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_142supercontigscaffold_142:85980..90859 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.22	0.1	0.15	0.17	23.19	14.19	4.11	4.58	3.95	1.47	3.48	7.59	5.69	3.29	0.23	0.17	2.57	3.35	17.36	17.23	55.4	59	23.23	38.92	13.83	23.65	2.9	4.11	1.33	1.99