XLOC_030728 (gene) - C. hemisphaerica

Overview
NameXLOC_030728
Unique NameXLOC_030728
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_142:194624..201562+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030728 ID=XLOC_030728|Name=XLOC_030728|organism=Clytia hemisphaerica|type=gene|length=6939bp|location=Sequence derived from alignment at scaffold_142:194624..201562+ (Clytia hemisphaerica)
GAAAGGCATCAAGCTTTAATTCTTAATTCATCAAGAAGATTGATCAAGAA AGAAATTCAAGGTAAATAAattatataatatatttttttgtctaAAGTTT TACGGTAAGGTCTGTGggaaataactttttttaagtcATTTCGAAATATC ATTAGCCGAGAAAGTTTATCGACTTCTCTTTCTGATAAGAGCCTGATTGA TGGGAAAGTACTAATCCATATAATGAAATACTCAAAACTTTGCCTCTTAA ATTACAGCTGATAGAATCATTGGGACACTCttccaaaagaaaaatcaaat tatgtTTTCATATCGATGGGAACTCAGTAGCGTAGATAggaggaggggcg caaaatttgtgtaggggAGCAGATTTGTGTGGTACTGTAATGATCTTTTT ACATTATAAatagataattactgtgtcataaaaatctgctctcttaCAAA AAAAGTATGCACCTCTGCTGGCTACGCTACTGGGACTAAGGACAAATGGG GGTGAAAAGCCACGCTTTTGTATGTTTAGTTTAGGGGATACCCGTCTAGT TGTAACCTTATGTATACACGGTGACATTATAGTTAGAAAGGGAACATTCA TTAAACGATGCGATATAGATTAATAGGGGAactcatagtgtcctcccccc cccctttataaaaaGGGGGGGAAATCAGTTTTCCACTTTTGAATGGGTGA GGGggggaaatgaaaatttgaatagtaaagggggaaaaaaaagagggggg aaaacatcgatagttggcaaatttggtggggggaagtgtgaaatcacttt aattttatctcagcaaccaaggtcagtccacatgatatcatgtgattaga tcatgattgaaaattaaccaattttcgttctatttatgtctagtattcct tttgcagctaAATTTTACGtctgtgtcaggttgaaatttgagaaaacata cgggtatatgggggggaaatgatattttcagaattttctggggggaaagc aaaaaagaggggggaaactaaaaaactgaaaagtcatagggggaaaaaaa agaggggggagatttaaaaaaatcaaaaatttggtggggggaacaaaccc tggaggacactatggaaCTCCGGATACCTTGATAGTAAGACCTTGAAAAC TTACATAATACAAACAGAATcttaataaaatatttcaaaatattacaaat agCAAGCCAATTATTAGTGTGAAGATTTTGATCACAGAATTGCACAACAA GGGACAGTATTCGAAACCCCAGCAATTCCAGCAAAGGGTGTCATGGAACG TATGACGATAGACTCTCTTCCTTCACTGACGCTCTGATTAGGcgtgattt tgaatgtccggagtgtcaactgatgcttgtacGGGGGTGAGATCTGTTGT CCCaggggtcaaaattcacaatgttcgAGGGGTAAATTTCcgaaaaatgt tatatcctcaaCCCGGGGAGGGGGTggtttctggaagagcccattactCA AATGGctcaaatatttgaaaattcaatcaaactttttacaTTATCAGATG AAGCTGTTTTTCCTCGTGCTTTCCTTATTGGTGGTCGAACAAAGATGTCA AGTATCCGAACAACAATTCCAATCCGTCAAATCAACATTGGCTGCACTGT CACGTCAAGTTATGCTCCaacaatttttcactgaaacaCGTGTCCGTACT GAAGGTCAATCAGGTTTAAAAGTCAACCGACAACGAAGCAATGGTTTAAA AAACTACCATATCAACACCCATACTGGTAGATCCGCAGCTGCAATTCACG AGCATGCTAATAATGACCGTACTGTAGGAATGGGAGAACTTACAGCTGTC CTTAATGGGATTGAATTTAAGACAAGACACAACGATTACCGATTGTACAT GCCTCACCGAACATCTCAAAACTTCAATGCGTACGAGAAAGTACCATTCC CTGATGTAAGAATATAAATGTTTCTTTATCttaatattgaaaatttaatt ttagacCCGCGGAAATGTATAATTTTGCTACGTTTCTGTTTATCCtctac ccagctgacacacaacgttgtttcaacgtttatttaacgttcacaatgtc catataacgttagataaacgttgaaataacgttgtgtcaGCTGGGtgcga aaagagtttcttacAGAGGAAGTATATATCTAAAGAGTTCTGCAATTCAG ACTATAGATTTGCATGCTGTCAAGTCATGTATTTTTCTCTGTTGTTGAAT TAAATTTTCAGAAGTTCCAGAGTGTTCTCAAAGTCAAGAAAAAAATGCTT TCCTCTCGAAAGCATAGATCTTCAATTACACtctttataaaatgttttta atgcCTCTTACAGTATTCTTCATCAGTTTGAATTTATCATGATGTTATTT TCCAGGTACCACCACAAGTCGAAGCTAAAGAAACCATCGATGAACAAATC GCCGAAATGAGAGAATACTTCAAAGCTTGGAGAAATCAAGATCCAAAACA CCGCGACTATAAACCATACTTCAAAGCTACGTTGTGCTACTTAGAAGGTG CCTGGACTGCATCAGCACAAAAAATTGACGAGCCTTTTGCATCTGATCGT CATTTTGTAGATGCAAAATCATGGATGGAACTTCACGAGAAATCAAGATA TATTGCTTACTCTGGAACCAAATCGCGACAAGAGAATCTCTCGTTCTTAC CAACCAAAATTATGGGTTTAGTCAACGATACAATCCCTAACTTTGCCCAA TGGAATTATCGTATCATGTGTCATCCACTGAAACGTCACTTGCCAACCAA ACGATTGAGAGTTATAGAAGATTTATCAGCTCGCATGAGGAACAACAAAG ACATCCTGAGACACGCTCTCTCACGATCTGCGCGTTACCAACTCAACACT CAAGATCAAGATACTTTCAGAGAAAGACCAGAAAGCTGGAAAACTCTCCT TGATGAACTCATGGAAGAAATCCCTGGCAAAGATAATTATCAAGGTACAA CATTATCATtattaatttgtcataattccATAACTCATAAAAACAttcca agctggcacacaacgttttttcaacgtttatctaatgttcacaacgtcca aataacgttagattaacgttgaaacaacgttgtgtaccaagTGGGTTAGC GTCTCgtacaaaataatgaaaaagttCGGGCAGTGATTTGCACACGAAAG TTCCCTTATCTCCAAAACTAAAACTAGTACTCTTTGGCTAATGGTGGATT TGTCgataaaaattgactttcatctTTTCtcatccttttatttcatttca aCCGGCACAAAGCTGTTTTTTAATGTCCATCTAACGTTTATGACAGTCTC TATAAGATTACATTATTGTCGATACGCAGTGTGCCGGGATTCAggtcaaa ataaaattaacaacTTTAAAAGCTTATACCCTGTCTCAATTTTCTgagta aaaatatatatatatcttttcattttcagttgatTTGGAGGATGAAGGTT TAGATGGTAAAGCAATGCAATTGGATGGAAGTAAACTCAATGCTGGTTAT TATCACAGATGGTTCACTATTGGTGCAGATGCTATGGGATCGGTCAAACA ACATCGTGGTTACAATGATGACTACATGTTTGCTGCTCTCAATACACAAG AGAAGATTGCCGGCGTTGAATTCaacaaatgtgtcaaaaataagGGAAAT AAGGGAAAAAAGGAATGCCAAATGTTCAGACAAAAATGGTCATATGCAAT CCCATTGGAGATCATCTACATGACACCGTTGTATAAATGGAATCCTTACA AATTGAAGCACCATGGTGACCAAACAACTGCTAATCTGAAAATCATCAAT GGCAACGGCAAACGAAATGGTAATTGCGCAGCAGGCGCTGCCAAGGCTTA TACTGGCATCAACAGCCGTAATTTCTACATGACACCTGCAGCATTCTACT CTGGTGCTTCTGTGGAGAGCAGTGCAGCTGATACAGCACGTGGTGTTACG TGTGTATTGGATCAAGATGGCGTCGAAAGACAAGTCAGAGCCGCTGGAAC ACACATTTTCCTACCACAAATCAAAGATGTTGGTGTTTTGAGAACCAGAT ATCCAATCTTTCCAGTTCACGGTGAAGGATCATCTGTATGGAAAGAATTG AACGCTGTCAGAGAAGTCACCATGAATGAAGAACAATGGCAAAAGATGTA CTGGAAAAATNtccttttatttcatttcaaCCGGCACAAAGCTGTTTTTT AATGTCCATCTAACGTTTATGACAGTCTCTATAAGATTACATTATTGTCG ATACGCAGTGTGCCGGGATTCAggtcaaaataaaattaacaacTTTAAAA GCTTATACCCTGTCTCAATTTTCTgagtaaaaatatatatatatcttttc attttcagttgatTTGGAGGATGAAGGTTTAGATGGTAAAGCAATGCAAT TGGATGGAAGTAAACTCAATGCTGGTTATTATCACAGATGGTTCACTATT GGTGCAGATGCTATGGGATCGGTCAAACAACATCGTGGTTACAATGATGA CTACATGTTTGCTGCTCTCAATACACAAGAGAAGATTGCCGGCGTTGAAT TCaacaaatgtgtcaaaaataagGGAAATAAGGGAAAAAAGGAATGCCAA ATGTTCAGACAAAAATGGTCATATGCAATCCCATTGGAGATCATCTACAT GACACCGTTGTATAAATGGAATCCTTACAAATTGAAGCACCATGGTGACC AAACAACTGCTAATCTGAAAATCATCAATGGCAACGGCAAACGAAATGGT AATTGCGCAGCAGGCGCTGCCAAGGCTTATACTGGCATCAACAGCCGTAA TTTCTACATGACACCTGCAGCATTCTACTCTGGTGCTTCTGTGGAGAGCA GTGCAGCTGATACAGCACGTGGTGTTACGTGTGTATTGGATCAAGATGGC GTCGAAAGACAAGTCAGAGCCGCTGGAACACACATTTTCCTACCACAAAT CAAAGATGTTGGTGTTTTGAGAACCAGATATCCAATCTTTCCAGTTCACG GTGAAGGATCATCTGTATGGAAAGAATTGAACGCTGTCAGAGAAGTCACC ATGAATGAAGAACAATGGCAAAAGATGTACTGGAAAAATGCTGACCTCGA CTCCGGTAATGAAGACACAACACTGTTGATGGGAGAATCAACCTGCGCAT GCGCACCACGACACACCCATGAAATCAAATTGGACGCAGCTGAAGTACAA ATGTTGAAAGGTGGCCATACTTTGACCAAGGAGTCTACCACAACTAATGC TCATTTCCATTCAGTACAAATTCGATATGAGCCggacaagaaatttttct atttcacTTCCTGTGACGCCAAATATCAATGCTGGGATAAACACGTCAAA CAATTTGTTATCTCAGATAGttaaatacaatttttaatACTTGTGAAGTA GAATGTGTTAGAACACACCCATATTTTATTAATACACCCTTCACTAGATT CATTTATAACGTAAATATATAATACGCATGAGCATACatgaaaatgattt gaaattcTTTAACTAAAAATACCCCTCTGAAATCTTTGTTAGTCATTCTG ACATGTATAATTGTTAGGTACAGTAAACTCACGCTTATATGAGCTTCTTT TTACGAATCTTTCTTATAATTTGAACTTTTTCTCATTTCCTTTCTGTGAG AAACCTTCTCTTAAAAtaatactctctataattcgaatgtctTTGTAATT GTAACAAATTAGATTCCcagttcgagttcgaattagcgaaagtCAACTGT ATCACAAGTATAAATTGCCAACAACAACCAAAGAGCTCTCTGAAAATTAC CGTCAGCTTCTATATCTCTATGTTTTCATCATGGTAATTATAGGAAATGT CTAAATGCAGTGTTTCTCAACCAACCATGTTCTCCGAACGGGTTTTCTTC TTCTAATAAAGATCACGTGTATGATCACGTGTTTTTCATATccttaaaat tcatgaaaatgacTCTTCTCAATGTCCCACGGGCTATCAGTTATTCTCGC CATTCTACTAGACATTCGAACAAGAAATCTTTACAGGTACCTTTATAGGT TCAAATGGAGCGCTTCaattctattttttctttttcaacaaaatggcagc tttttcaggattttcttcAAGTTCATGCATCGTTTTCATGTCACGTTTAG CGATCAGATTTCGACTTCGTTTTATTCTTCTTTGTAGAAGTTCATTATAT AAATCCCACCAAGACGCCTTATCAGTATGATTTGTCACTGATTTGATAGC CTTTCCAGTTGTAGCACCATGAGGCACTAAAGTCTTTTTAGTTAAAGGTA CGCGTACCGTAAAACGAACCAGCTTCGGTTTATCAGCACAATAATCACGA ACATAAATGACTTCATTTTCGTCTAATTGCCAATTATAAATCACAAACTC ATCTAAAAATCCTCGGAAAGTCTCGTCACCCACACTTGCTTCGTTATCCC AATTTGTCGGTAAATCTTCTCGTTTGTCGGGACTTGCTATTTTCTCGAGT TTCAAAATACCGTTAACGAAGATTTTGCCGACtccattttcattattata GGTGGCCGTCAAGTGTGTCCATAAGCCCTCTGgcactaaaattttatttt gagacCACATGTCAATTATTTCAGGAACACTCTCAATATCGGTACCAATG GCAAACCGTACACCGCCATCGATGACTTGTAATCGGTATCCAATATTTCC TTTATCACTTTCAGTAGTGAAAATATTATGAACACCACGTGTGCTGTTTA ACATCACCCAGACCGTGATTGAGATTTTGGATGTGGGTAAACCACGTACT GGGACACGCTGAATATCGAGTTGAGGGTCCGGACCTTGAGTCAAATCCAA ACAATAACCACATTTGCCGCAATCTTCTTTCTGTTTCGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00048279TCONS_00048279Clytia hemisphaericatranscript
TCONS_00048280TCONS_00048280Clytia hemisphaericatranscript
TCONS_00048281TCONS_00048281Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00048281-proteinTCONS_00048281-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_142supercontigscaffold_142:194624..201562 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.07 0 0.03 0.02 0.07 0.02 0.12 0.06 0.04 0.08 0 0 212.49 190.14 0.08 0.12 0.16 0.08 424.28 379.32 2.97 5.04 0.27 1.11 5.73 6.22 0.03 0.03 0.04 0