XLOC_030751 (gene) - C. hemisphaerica

Overview
NameXLOC_030751
Unique NameXLOC_030751
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_142:725068..734772+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030751 ID=XLOC_030751|Name=XLOC_030751|organism=Clytia hemisphaerica|type=gene|length=9705bp|location=Sequence derived from alignment at scaffold_142:725068..734772+ (Clytia hemisphaerica)
gtcaaagtggaactcactaagaaacgagatgaaaaatcccggtttttagt
gaggtgctcgctacttTTGTATctgctttgattttttttacagaagGCAA
AGTAACAGCAAAATGCCTTCGTCACCTGATGACGAAAAAAGTCAGTTTTG
GCTCATCAATGGAGGTGGTGGAAATGAAGGTTCGGGCGAAAAGCAAGAGG
CGCCAAAACGTGATTTATGGGGTAGCCAAAAGGAGTTCCTCTTGTCATGT
GTGGGTTATACTGTTGGACTTGGAAATATTTGGAGATTCCCTTACTTGGC
TTATCAGAGTGGTGGAGGTAAGACTTGGTCTGGAAATATATACCAAAACA
TAACCAGGGTACATTTTTACTGTGCACTCTTATCATAAAGTTATAAGTAT
ACACTGCAGGTTTCTCGAAATTATCTTAACAATTACAGCTTTAGTTATAC
GACTAAAATATCTTATTCTTTTCCCGGGAAGTTTATTTTCACTAGAACCC
TAGGCAAAttgttcaatctcaaaataatttccatgaaatgaaaatatttt
tcgcccAGCTAAACTTTAATGAATTTTGTTGAGTCAGATTATCTACCAAC
TCTAGGGTTGTCATTTGCCTAGTTTTGATAGTTTTGCAAATGTTCACCCG
CTTCCCCACGATAGGTGCATTTCTGATTCCTTACATCGTCATGTTGATAA
CATGTGGAATGCCAATGTACATTATGGAGGTGGCGTTGGGTCAATACATC
GCAGAAGGTCCCATTCAAGTGTGGAGAATCGTTTGCCCTCTCTTTCGAGG
TAAAACTTTTATTGTGTTATGCTTTCTACGTTTTCTATATTGAATTCCCA
ATATCATGTGGGAGAACTCATACACGCTCTTTTCTTGTTCTAGAATGAAT
AGTACTCTCTCTCTAAAGTAGTTCAAGGTGTCCACTAGGTATTTAGATAT
CTGTGGATTACAAACACAGAAACAGCTTCTTGTGGGTGCTGTGAAATTTC
GCACTCAAAGTTTGGACTCCTACTTTATCCTTAAGTTACATACAAACGCA
CCAGCTTAACtaaaatttttaatcaaaaaatacTTCAAACTGATTTTCAA
ACAATCATCTGTGATCACCATAATGCTTTACGATGTTACTTCATCTCTAC
AGGGATTGGTTACTCAATGCTGATGGTATCCTTTCTGGTGGGCGTTTATT
ATAACGTCATAATTGCATGGGTGCTCTTCTATCTTTTCGCCTCATTCAGG
GCGGATATCCCTTGGCGGCATTGTGATCCTACATGGGCTACAAAATATTG
TCTAGAAGGGCCAAGACCGTCGGGTaggtttttcttaatttttactTACT
TGGTTGTGCACTGTAGTGTGATCGGCACTGAACATAAGAATGAGCGTCAA
AACTGTTCAGCTTGTAAGTTACATTAGTACTTAAACCCTTTGCACCTGTG
CACTCTGTACCAACCTTTCCTGATAATTTGAGATGGCTCAATATTTCACA
TAGATAACCAGTAAAGAAGGACTTTTCGATaatctttcgattgttttcaa
agACTCCAACGGGCTCAGATATCTATGAACTAAACGGACCATTTGAAGGA
GCAGGGATTTCGAACCCGTGCTTGCATTCTGACTATTCGGTCATCGCTCC
CTTAAAATTATAAGTAAATTCATATCCCAGCAAAGCACTTTCATcagatt
gaaaaaatatatgttttattctAGGCAACGGTTCCCTGTTTAACACGACA
ACGGGTATGTTGTCATGTTTGAAAGGATTCGATTTATCAACCAAGCTTGT
GAACGGTTCAAGTGTAATGTATTGTAAGCCGTATGAGAAATGGAATTATC
CAAGCATTGAATATTTCAGGTAAACTCACTTATCTCAGAACTGGTGACTG
GAATGCTTTGATCCTTATTAGGTTGAGAAAACCTGTCATAGGAGTGGCGA
AATTTCCGGAGATTTTCCGGATAAATTTTCTGAATGAATAAACCTTTGTA
CAGTAAACcttcgcttattcgaacttctattattcgaacttttctataat
tcgaacttgtttccagtcccTGTCAAAGAGCAACTCtcttaaaatctttt
caataattcgaatctctcggTAATTCGAACAAGATACCCCACTCCAGAGT
CAACTGTATCAGTGTCGCTAACGTTCGATTTTCAgaactcgggtaactta
atgcatgtcccagaattgcattaatttttccgccccagttccagtcccta
aaccataacaaactatacatttttggaagcgtattttgATGTataatacc
gtattcggtgtaacttaaattctttctcagtataattagagatatcttga
gaaaacctgattatgacgtcatgattgatgacgtcataaatacaaaaagt
tgaatatctcaagaaatataaatcaaaactttatgaaatttggagcAGTG
ATAAAGTACGTTGAGATgtctcaaaaatttttgaaagtatttcccaaaat
taatgacgtcagcagaaattgcaagaattcgaatttttgcgataaaatgc
tgacatcagcaaattttccatttttttaaaaaacattctcctcctcttga
tgagttctatcattggtccaaattttataaagctttgagtattagttctt
gagatattcaactttttaaaattatgacgtcataaataatgacgtcaaaa
tcacgttttcttaaaaaaactcaaactctgctgagaaagaatttaagtta
caccgaagacggtattctacatccaaatacgcttccaaaaatgtatagtt
tgttatggtttagggactggaactggggcggaaaaattaatgcatttttg
ggacatgcattaagttacccgagaatCGATTTTAGAGTAAGATTTCAttc
caaaaaaccttaaaagaaaattttgttttcttcttcccaagaaaggataa
attatttcttGCACTTCACATCTGTGAAAGACGTTCTAGATGGTCAGTTT
GGTTATACCTTACAGTTATGATatgcagttgacgctctctaactCGATTT
TCAAAGGGGActggattttcatcaaataagggagcgtattgaATCATAGA
GCATCGTTTATGAGAATTTATTGATGACTTTGAcattcaatattatcgaa
taatggagagTATCGAATGGTataacgtcgaattagagagcagcATCTGT
ACTTGTTATTATGTTTCCTTCTATAAATCATACTCGGACATTTCCCTCTT
TCAGCAATTACGTGTTGGAGCAAACGAACAGCATTGATGACACTGGTAAA
ATCCGCTGGCAACTTGTTTTATGTCTTCTTCTCTCTTGGATGGTCGTGTA
TTTCTGTATGTGGAAAGGCGTCAAATCTGCTGGAAAGGTCAGGACTTGAT
CAAACTCTTAAATAATCCCTTAGTGTTTTTTACGATTATAAGGATATATT
ACTGGTCATTAGTTTAACCAAATGAGgttaagagggggggggggtttcag
ggggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNTTTCAGGTCGTTTACTTTACAGCAACTTTCCCAT
ACGTCGTATTGCTAATTCTTCTGGTCCGTGGATTAACACTACCAAATGCT
ATCGAAGGAGTCACTTATTATATAAAACCTGATTTCGAGAAAATCGCCAA
ACCCGAGGTAAAAATTACAtattttagcattcattttcaattcattcaac
cacgctgtctttttctttttgtcatgAAGATGCATCGTCTTCATTATGAA
TTGGAACTGGAAAACTTGAGCTTAAATCTGTTTAACGCAGATTCAGCCTT
TCATCTGAAGCAACAAAGATCCACAAAGTCTACTACTTTCAAAGACAATG
AGTAATCTTGAAATCTACTTTTGCATGATAAAGAACCATATACATTTCCT
AAcaacactcccttctcacaggcCCAACGGTTGGAAAACTTCTACCTACT
GTGAGAGGAGAGGGCCCACGCCATGAAATTTAAAGTGGGGGCCAATGAAT
ATAGAGTCGAAGGAAGCGCAACCAAAgacttttaatttgcaaaaaagtgg
ggggggcatagccccctgCCGTCCGTTGGCGTGGGCCCTGGAAGAGGGTG
TCTAacaaaagtatgattgatattTTTCAGGTATGGGCAGCAGCAGGTGG
CCAACTCTTCTACTCACTCGGTCCAGCTTTTGGTTCACTTCTCTCATTCG
CCAGTTATAACAAATTCAATAATAATTGTATCAGAGATGCCATGTTTATC
TCAGCTTTAGATGCTTGCACGAGTTCGTTAGCTGGGTTGGTCATTTTCTC
TGTGTTGGGATCCATGGCAAAGAGTTTGAATGTTGATGTGAAGGACGTGG
CGACTCAcggtaaaattgatttttcacatatATCCATCATTTTGTATGGT
CTGGTATGGTAAACGTTTTACAAAGGGTCCTTTAAGAAATCATCTATCCC
atctttgatattttattttatccacACATTGTTTAGTTTAAATAAACAGG
CTTTTAGGCAGTTACAGGCTTTTAGCCTTCCATTTTACGCTAGGAGCGAA
GTTAGATATCAAGAATCCATGAACGTTATTTGGTTATTGTGTTCTTACTT
CAAAAAATTTACCAAACTTAAAAATTAGGGACCACGCCCATTTTTCAGTC
TTGGAGAACCATGCACGTTGTCAATGTTTTCATCTTTTCGGTTTTAGGAC
CTGGTTTAGCCTTCATGGTATATCCGGAGGGAATTTCACAAATGCCCTTA
TCGACATTTTGGtccattattttctttttcatgctCTTCACACTTGGGCT
TGATAGTCAGGTGAGATTTACAGGAAAACTTTTTCTTCACTAGGCAAATG
CTAATTATTTCTTGTTGCACCCAGCACCAAGGACTCATGTACCCAGGTAT
TATTTATCACTGGCCCTATCAGCCAACGTTTAAATTTATGATTGCCATCC
AATATTTTccaaaaccagaaaaataggtTTTCAGTTGTCCCAAATCTGGG
AGGACACTAAGCAAAATAATGGGTACCTAAAGGTTCGTAGTTTTTTCACT
TTAAAGGTTACTTTGTTTGATCTAGTTATAGCCAATATCGCGCGGAACCA
AATGAGATGTAACGCTACTCGCAAGGTGGGACGCCCCGGTAATACCACAA
GCGGAATGAGTGATTTAGAAGATTTAAAATTAAACTGCAATTTAACTATT
GTAAAATAAACATACACACAGCATCCCTCGGACCGAGAACCCCAGGTACT
AAATGCTTCATATTATTGGAGATAAATAACTTTATATGTCTACTTTCAGT
TTGGTATGATGGAGTGCATAGTGACGAATCTGGTGGATGAATATCCGACA
TATTTGAGAAAACGAAAAGAGTTATTCATTTTCGGTGTTTGTGTCACGTG
CTTCTTGTTCGGTTTCACTATCATCACCCAGGTAACGACGTTgttcaaaa
caaagttaaaatgcatgcgtatatttttatttcataaacTGTTAGTTGTT
ATTATGCGCAAAACACTAAGAAAAAGGAATACGTAAGGGTGGTACAGTGA
CTTtatcggtcggggttgtggatggtgaaaattgtcgttctttttgaaat
ttgtcgaTCTATTTTTATGTTGCGAAGTTGGCCTTTTCTCCCCTCTGCTT
AGTCAGAGAATATAACCCTAGTGTCACAGACTATCCCACCCTCACTtgaa
aatttgcccaaaatttggcCCTGGTGGAAAAAAATCACctacaatttcaa
tttcatcctACTTAAAGTTCAATGGAAAAACTGCAAAACCATCCACCTGG
AATTTTCGGGCTGTTAGCAATAGAATCTATCCTCATCTTTCACTGGGGTT
AGAGACAGGGTTGAGAGAATAATTGGGCCCAGAATTCTTATTACACCAAT
TTCTAACAAATCCGGCTTTTTTAATCACTTCTACTCCTAGCTTTATCTNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNCCCCCCCCCCTGGCGAAAAGCACGacaataaagaaaataattagTCT
TTTATCTTAGGACTTAATATTTCAGCACCTTTAACTATCCAAAAACAATG
GGTTCTCAACTTTCAATTCTaattacgttttttttttcaggctgGTATCT
ACTGGTTTACCATCTTCGATTACCAATCAGCTGGCGTATGTCTTATCTTC
GTGGCTTTTGTTGAGATCATCGTTGTAGGATGGTTTTTCGATGCTGACCG
TCTTTTGAAGATGGTTGAGCAGATGGTAGGCTACAAACCGTCCCGTTGGT
GGAGATTGTGCTGGAAGTTCATCAGTCCCGTCATCATGGGGCTCGTCTTG
ATTTTCAAGCTCACTCAGTGGGAAGGtaagaataaataaattttgattct
aGGGGCTTTGATATAGGGTCGATGAAGATCAAGTTTTTTCAACTGATTAT
TCTTAATGGAGACAAAAAAACCTAggaaataaaataagaaaagagcATTG
CAAGAATGTGTTTCACTAGtccaaaatctaaaaatcattCTATCAACTTT
TTTCAGGGAAAAGTAGACCTTGTTAGGCTACGTTATATTCCTGCCCCTGT
TTTAAAAGGCTTCTTTTTAGTCGTAAGTAGTCGTAAGGACTGGAGACTAG
AGACTTTCAAAGACAAGTAGACAAGTATCtcttaatttttcaaactaCCC
AGACTACCTGTTTCAAGAGTCTATCATAATGTGGTGACTCTCCGAACATT
ACTTATCAACCAGTTCAGTTTCCCTCGGTCTTAGGTATATCATATGGTAC
TTATAAATTCCCACCCTGGGCAGAAGCGATTGGTTGGATGTTAGCCCTGG
CAACAGCTATCATGATTCCCTTGTTTGCTGTTATCACACTCTTCAAAGCT
GATGGCAATTCTTTATGGCAGGTAATCAGTTTATTCtaggaacaaaaata
aaaaatgttcaaaatttccCGTTGTTGGGAAAATTTGACTTCAATGATTT
CATCCCAATTCGAATTTCAATGCATTAAAAATTTTCACTCCAAAAACATT
CCCACTGGATTTTATGAGCCTgcaacaatagaatttttatccgcATTGGG
ATAATCTCcactgtaaaaaaaaattcgaccGGGGCTGTAAGACATAATTT
GACCGGGGCTGTGATACATAATCcgaccggggctgtgagacaggggtgta
ttatttAATTGCTTATCTGGTTCcatagaaaatcaaaacatccgTTCGAC
CAAAGATCgagattttgaacaaaaaaggTGCAGAAAATGGCGTGGAGGAA
AGCTTCCCGTTGGGTCCAAACAAGAATACCTACGAAATATCAGCTGATGC
ATAATCCAAATAGTGCCATAGTGCATCATTTGCCAGATCTTTATTTTatc
aattgaaattcaatcgATGTTTTCTTTCTTATGGACAGTGAGATAAATAT
TGATTGGTAATTTGCAGACGCGACCAAAAATGAATTTCACTCGAGTTCTC
TAAGATGATTATACAAATAAAGTTAcaacccaatgaagtataagcccgaa
cgGTTAGAATCAAATCATTaacctttttcaagcaagaaaaaatgaGGCCT
tgaaatatgcgccgtatttttgacgacgaaTTGAATCTagtgattccttt
gttttcgagtgatatcttttcgaaatttaggtgtgaattttagtttcaat
cttaGACTGCTAGCATATCCACTAACAGATTCttgctccttatactacct
tgggttttgtagaggtctgcgattcagactaaggTGGACCAcgctaggcc
gcgcaactttcaaggagattcgattctagcccttcaggctatTACTTCAT
TGTTACAACCTACGTGAAGATATTTTTGGCGTTTTTTGTAAAGTAGAGGT
TAAGCAATCGGGTTGCTTGCTTTGtttgttttcaataaaagtAAGATAGG
TTTCTACTAGCTGGATAAACGAGTGTTGTTTCAACAGTCATATGACGTTC
AGAGGCGGAATGGATGTAAGCTGAACGTTGTTTGAATGGTTTGTTCAACC
TTGGACATAAAATGTCTCTTTTTGAGACAAACATCTTTgacatttatttt
gaagatgTGATGACTTCCTCTCCGATTGAATAcattatcaaattttttga
acGTTCAAAGGAAACTGATATAAGTGACATGCGATTAGTGTTTATAGATA
AAATATCTTATAGGGAAAAATATAACCAGtacatttttgtaaatataaTG
AATATATATAGTCtatattttaaaagaattttttgtttcagattttcttt
gtttttattccaCTACTTAATTGATAATAAAGAATATTTTGGAGAGGTTT
GATTTTGACCGAAAATCTAGATTTTACTATTGAAACTAAAAACATGGTCA
AGGGTACATCACAGATGACGTGGAATAGAAGGAATCGGTTAGAAATCACT
CTAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00048314TCONS_00048314Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00048314-proteinTCONS_00048314-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_142supercontigscaffold_142:725068..734772 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.01	0	0.01	0.01	0	0.03	0.36	0.74	3.97	5.38	4.43	2.9	23.96	25.38	8.2	11.76	12.94	12.04	24.87	20.72	16.35	17.69	4.43	6.28	13.75	13.69	2.96	2.85	1.64	1.78