XLOC_031104 (gene) - C. hemisphaerica

Overview
NameXLOC_031104
Unique NameXLOC_031104
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_149:977..4831+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031104 ID=XLOC_031104|Name=XLOC_031104|organism=Clytia hemisphaerica|type=gene|length=3855bp|location=Sequence derived from alignment at scaffold_149:977..4831+ (Clytia hemisphaerica)
TAAATCTCCTGTTATTGAAACTGGTAAGTATAAAAACCTCTTTACCTTTC TAttctaaattttatattttccttTGATTGTTATTTTGGTAACTGCAGGA TTGTTCAAATTCTATCCCTTTACaccttttttttgtattttgcaaaACTA ATCCCTAATCCTCTACATTGCTCAAACAGCAAGATTTCACTTACCCTGTA TATTGCGAGAATTAGTTCTTGGTAACATTAACAACAACAACTAATATCCT ACAATCATATTATTCTTTAGATCCTCCTGAAAAACCTCAAGGAAAAGCAT TACTTGAATCACCAAGAAGAAAATCAAACTCAAGtggtatttatttttaa tttggtTTGGTTGCATTCGTTTTTAAATAGGTTGATTTAGATGCGACGAC GCGGACTCATAGAAAACTTGTGTGACGTCACGTCAATTTATGCGTCGTCG cgtaaaaaaaatgatttagaaaaactttttgagaCGCGACTGACTACATC TCCTGTGACAAGAACAAACCaaacttttgcaaatatttATACTTTTAAAT GCACTTTTTTCTTGGTGTTTTATGAAATATAAAGCGTTTTATAAACACAC TTTTTTGTACAGTATGATAGTGTGTGATTTTTGTGTTATGAGAGAGACGA GAGAGAAAGAGAATTTCTAAGATTTCCTTTTGAAGACCCTTAAAacactt ttcaaagaaaataacatAAAACAGTTATCAGAATGgtagaagatcaaaat aaaATCCAAGAATTTAGTAACTATTTGGTTCCTATCAGTGTTTGAGAACT TTTACACATTGGAAATTTACTGGTAAGAATGTAAatatgaaatcaaaaca aaaaatcaacaaacctGAACTTTGAGAAAAACTCCATCATAATAAAACAA GAAATCCAAGAAATTACGACCAATATTTTATAACAGTGGTTGGAAAATAT CCAAAGTTCTTacttaaaaatactttcttgcaaaaataaaagcaaaacac TGCATGTTTACAACCATCTTCGACTTTTCCACCTCTCATCGCGTCCTTTC TGTGACAACACAAAACTGGTCTATTCTGCGTTGTCGTCGCTTCAAGACGC GCTGAAAAATGTCTCGACCCAGTCTTTTAGGGGTTTCCCCAGCAAAACTG CGTTGTCTATACGTGCGCGTCTCGACATCTAAATCAACCTAATGATAACT TTGTacatgaatttgaaattttccaactccactcacaaatatctttccaa cgatttTATAacgattgaagaattccttcaaaggTATGAGGAAAAGGAAA AAGGTATAAATACAGGCATAAGGAAAAAATTCCACACTTATCACGAACAG AACTTTTAATATTAAAATTTACTCTTCAGATCCTGCTGAAGCAACTGAAG TGCTTGGAACACCAAAGAGAAAACTAACAAAAACCGAAGGTAGTTATCTT ATCTCCTTTATGTTTATTCTGAAATTtctgttaattttattttccattta ataAAGATGATCGAGTGGTAAATCGCCCTGTTTGAAAAgtcaagatttaa aaaaatgtctgaATGTTAAATCATATTTTTAACAATAGGTACGCCAGCAA AAAGAATTTACTACTCTCCATCCACACCCTCAACAAAAACACCAACTAAA GACAGTGATAAGATCGGTAAGTGAATGCAGAGCTTGTGAAttaagttttt tatattttttcataaacatTGTTGAAGAATTATAATATCCTGAAAATAAT ATTCAGTCAACCCACATTTTTGATGAAGTCCCATTTACATGATTAAACTC ACATCATATTTATAAATTGACTTTTTGAAACTGAATCTGGGTTTGGTACT ATTGAACGGACCATATTCTCAGTATAGGTCAGGAACTGCTTTCATTTCCA ATGGGTTACCAAAGTATTTCAATATTTCCTTTCATTTTGATTGCTACTTT CAAGCTAAAGTATTCTTTACTCTGTTTAGATATGACTGGTTATATCACCA ATGTTACCGAAATTGTAACAAGCCGCAAGTCAGGCAATGATTACTTTGAC GTTTATTTGAAGACATCACCTACTGTACAAGAAGTGATTCGTGTTATGAT AAAACACAACAGATCGATTAAAAGATCTTTCTTTTCAGAAGCTAAAGAGA TTCCTGTCAAAATAACCAACCTGACGAAACGAGACAACGTCAGCTTTTTT AACTCAAACTTCAATAGCTCATCACTCGTCAAAACCCATCTTACTACATC GTTTGACTTCGCCGCTgataatttattttcttcaattgACCACGTTAACA CCTTTGAAAAAGGAACATTTAATATCAAAGGTGCCTTTATCTGGTCATCG GCAGAAACCAAAGCGAAGAAGAAAGATGGTTCAATGGAGAGAGTTAGAGA TGGAGTGATTGTACAACGAGAAGATAGTACCATTTCAGTTTCCGTGTGGG GAAAACTAATTGGAAAGAATTTTGAATTACAAGATAAACAAACCATTGAA GATAAGATTCTTGAATTATCAGATTGTGTCAAGATCACGTATTCGAAGAG TAAACTTGTTGTAACCAATATTTTGGAAGTGGAAGAGGAGGATGATTTGA TATAGAAACTTGGATTTAACACTATGATAGATACTGTACGGAAACTCCTT TGTCATTTACCTTGttccattgttttattttttagtcTTATTGTTATCAT TCATTTAGGATAGTACACACTTTTCTATTAAAACAACTATAATTACACGG GTTGTTGCCTAATTAATCCCCACATAACCTCGGGTCTATTGTAAAGAAGC ATGTCTGCTTTTACACACCATCTAGAAACAGTATGTGCAGGCATATGCCG TTTATAGATGGTTTCTTCATATTGTATTcattttacagaaattttctgat ttatttGGAAAACTCATATTCCTACCACAGAGTTTGTATgtagtttgtat ttttttgaacacgtgttcttttgttttatgttatTTTTCTATTAGGGATA AGATTCATTTTACAGAAACTTTCTCATTATttgaaaaactcaaattttta CCACAGAGTTTGTATgtagtttgtattttttgaacaaaatgttcttttgt tttatttttcttaaggGATGGGGATAAAAGAATTATCTCGTGTAACAGTA TGTAAACGTAAACCATCAAATAAGTTTTTTCGTCTGTACCTTAATTCAGT CTACTACCTTTAaggaaattagaaatttctaTTCGCATAATCGTTTATTT TATTTGTAGCGTCATTCTGTTCCTACTTTATCTCGTCAACCTGTTCCGAC AAGCTCGTTTCTTGAACCCGTCTTACATTTAAAATCTATTCCATGTAAAT TGGAAGTTTGTTTTGCTACCATGtacaaaccactctcaaggaagatactc tcgggtatctaataaacgtacatgtacgtttattaattttaacaaaaaat ttcctCAATTTCAAGTGCCTACTTTTGTTTCTAATGATAAATATCCATCT TTGACTTTTGAGGTTTGTTCTACTCGTGAAAAGAAAGCAAATTACCCAAT ATTTACCCCCTAACCTCATTGAAAAGATCCTTCAATTAGGTTTGCATGCC TCCATTTTcgaccctgtacgtttattcgctactgtacgtttattaggtac TCGAGTAGTCTAATTACTCTGATATGGTTTCCATatgatagcaaaaatga atgccaATTTAAGTGGAATAAACTTTAGCCTGCAAAACATAAGggtcatt tctttttaattagattttttcatgTCTTCGTCGAAACCTTAATTATAACT AGGCCatcgtttttatttatttaaatggagtgttattgttattattttca ggaaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00048956TCONS_00048956Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00048956-proteinTCONS_00048956-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_149supercontigscaffold_149:977..4831 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.51 0.44 0.41 0.58 5.59 4.15 3.95 3.82 3.39 3.95 4.05 3.3 2.57 2.3 2.78 2.11 2.37 1.57 1.99 2.51 4.52 4.43 1.14 1.99 1.91 1.94 2.66 2.14 1.93 1.61