XLOC_031114 (gene) - C. hemisphaerica

Overview
NameXLOC_031114
Unique NameXLOC_031114
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_15:270501..277323+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031114 ID=XLOC_031114|Name=XLOC_031114|organism=Clytia hemisphaerica|type=gene|length=6823bp|location=Sequence derived from alignment at scaffold_15:270501..277323+ (Clytia hemisphaerica)
cagaaaaatacaaaaaggctagttttgaaaaagcaataaaaatcaTATGA AGCGAggcagtttttttttcttggaaaCAATCATTATTGAAATCAACGGT GCGGATTTGCTTTCAAATGACGGTTGTTGATTTCATTTGTGGTAAGTTGA GACATCTCTTTATCTATCTGCTCTTGTGATAAAACTaaggattttttttg catttgatattccgtttttgtttttttaagactgTTATTCCGGTATTTGA GATACCTACCGgtaccatagatttataaagcccgaggggctagatgtcgg gctttaagccatcacaggcaaaaaaaagtgaatatcggaaaaccCGCTAA GCTTCTAATTGGTcaatcgctgaaattctattgtaatgtcacgtgacttt aggtaggatttcctacttaatcacggcacacttttcagcaaaggCTTTAC TTCTATGACCGGTTCGggtatttgataaaaaaaatccatttttagTATTT AGCGACAAAATTACTGCTTTTCCGTTATCTTTTTTAACCGCATATAGTGG TTTTGTACGATCTTTTTTATTGATGCCGGTATTCCAGTTTTTGGAATCTC GCGAAAAATGGGCTATATTTTGCAAACCGTGAAGTGGTCGAAACCACTAC ATAAATCACTGAAAGATGAAATCCAAAGGCTTTGCTGATAGACCTCCTGC AGTTCAGGATACCGTTACCAATCTTTAATAAAAGATCTATAATCAGATAT ATTTTAAATGCAAATTCTTAACGAGATAAATAATGCAGATACTTTATATA TTAGACTATAGATCACTTAAATCCAAAAGaattatttcactttttaacTT TATTCAGGCCATGGTTCAACAACGGTATTATATCAGTCACGTGCAAAATA CATCCATTTTGGTCCTGGAGATTGGTTGATATAGCGATATGTATCCATCT CCAAGCAGATTCTGATTACCCAGTGTATGGCACCTAACCACTTTAAAGGT GCGTAGTAaagcgaccgtagcatgaaggcagagcatccagctacggtgcg caagttgtgggttcgaaccccagccgggtcataccaaagattcccaaaat ggtacttgatgcctctctgcttgatgctcagcaactaaagagacggatca agggtaagtggagaaaaccagggaaaggagtggcgccctccccttccttc gggtagacagctatacgaaaagggagcctttgggtcgccctcgactgcgg tcgcaaacttacttactttaaaGGTCATGGCTCCATAAGAGAATCTTCAC AGGTTAGCAGACCACTTTGATCTTTTTCGTGAAGATTTCGGATTATTTAA TGAGCTTTTGATCGCGTTGATTGattaaagcaaaacaatcgcaTCGAAAA CAAAAACTAATCATAAACATGAGACCTTGTGTACCGCAGTCATATTTGCT TATTCTTTTAGTCATTAGGCAACGTCGTCTTGAATGATTTGGCCAGGTCG GATGAGCACATTCACCACTTGAGAGCATAGCGTGGTTTGCGCTAAATGGG TGATCTTTTACGAGATTAAGGAATCACTAGTAAGTCATATCCGTAGTATT CTCGGTCACTAGTAGTAAAGCTTCACGCCCCAGCTAATCAGTTATTGACA AATAACCACACCCCGCTCTTTATCATAGCGCTCCGCATTTCACacgtcat aattatttcaaTAAGAAATTTGTACGAGTTCCGATCCCACAGTTCATTTC GAAATGATTGGAGAATAAAGTTAttacctttcttttgatattgtaaTTAA TTAACGTGCAAGGGCAATTAACACAAATGAGGATGGGATTGAAAGTTGTA CAAACGAATAAATTTGACCAGATTTGttactatttttagattcgtCGCGT TGTGCTATTCCGTTGAAGCTGTTTTAGCACTAGACATCATAAGCTATTTT TTCCTATTTACTAcagttttttacatttttttttttgaaataatgaagAC ATGCTAAGCTTGTCAATCAAAGCGACAGAGTTATAATACGTTTATTATGA TTAATTGATGTATAATCATTAAATTATCATTATCATTAAATTCCGTATTC CGTCGACTctcatctttttttaaaaaacgtttctttcaaaattagaatat AGAAAAATTTGTACTTCGCTACCTCTAATATTTAATAAGCATTGGAGAGT TCATGCAACTAACCCTTTTGAGGCGACAGGAGGCGACCGACCGAAGTTGA ACATCCCACAGTTTTGACCAGTAAAATCGAGGGCGTTAAAGTTGGTATAA GTTATCGAACGTAGGAAAATGAAAAGCTAGTCGTCTCTGCACGACACATg gtgttttttataataacaaactGTATGAGAAAATAAGACTTTGATggaca aaattttaagaataatttaagaCTTTGcgatttcttgggaaaatggacaa aatactcacaaaatggcgaaactaacatgttaagaaaatctttaggctta aaactcaataagttaagaacatacaGAGGCTTAATTCTTGGACGTTCTTA TTAAGGAATCGAAAACTCGTTGTTTGACATTTCTATTTAACCTGTGAAAG TAAAAGCTGTAAAGTACTCATCTGACTTAATGATGCAATCGATCTCTGCT TGGGAAGGGGGAAATGTAAGAAAATTTCATAGAACTGCTTTTCAAGATGT ACAGGCATGCAATAATAATGAATCAATAATGAACTCTTTAGATTCTATGA ACATCTGATGGTATGAtgtttcttctttgtttttagatCCATGATTTTAA GTCCAAAAATGGGCAAATCTACATTTCCAGAACAATAAGTAAAGTTTCTT GTAATTCTCTTATAGGTTATTAAGTTATTAAAAATCATGAACTTGATGTA AAATACCACATGTTgtgaacattttcaattctaGCTGTCTCTAGAAGGTC CTTATTCTTACCAAGGGTTTCAAAATTTGTCCAAACACCTTTAATGAGAT TCACtattaatatatattttttcaattttcaatcttaaaaagataatttt aaaatttgaaaataaaaaaacttacaaaattttatattatGTTTAATGTC TAACAGAATCTCGTTGAAAAGTTTCCTCAAaggttaattttgaaaaatgt attgGTCAAAAAGGcaattttgagttatttttGGGGTGGTGTATTGAAAT CTGACCTCAAAATCAATTTGTACATTGTGTACCAAGTGAAAAGGGGTGGT GGTCCTTTTCAAAATTAtctaaaatcagttagtactcATAGTGTTCCGgg ctaactgcttgaccccccatGCTTGAGGGGtcaattgtttaaaaatttgt tttctgtAAGTAGTAAGTCTAAGTGATAAATAAATTGGTGGTGAAGGAAA ATTATACATTTGCATTCTTTTCGATCAATGATGTTTCCTCTACCAAAACT TCGCGGAAAATTATGGGTTAACCCCTCTTTATTCCCTCTTAAAATtccaa attgaaaaaatattttttctccaatGAGAAGATTAAATCTGAAGTTGGAG GGTACAGTACTAATCTGATAGAATTAGTTCAAAAGGCCCATACTTTATTT AAGGTAAAAATCTAGTTTTACTtacacccctatctcacagccccggtgaa acttttttcctcagtggggataaaaatataaaaattccaatggggataga aattatatttttccaaggttaaaaaatccagtggggactgccacttttaa acattgaattccgaatggggatgaaatcaaagtaaatttcccagtggggc tgaaattccagggtattttccccaTCGTGGACGAAATtgttgccaaattt tccagtgggtttgtgacacaggggtgtttactTGAACATAAGTCGAGAAA AGGACACTTCTTTTGTGGGTTGATTTGGAAGATCAATCAAATGCAGGTGT TGAAAGGGAAATTTTATATGAGGAGAGTTTGTACACATCAACCTATAATG ACCATAAAAGGTTTAGATTTGATATTTAACCATATATAGACAAAGTTATC TATCCCTTTACGACAGATTGTGATAATTTGGTCTAAATTTAAACTATTCC TTATAGGGTACGGGCCGTTGTAAATTCGAACGATTGGTCAAAAAACAAGA GACGTTAACGAAAGAATTGAATTCTTAGAAACTAAAACGCCACACGAGAG ACACGatttcaaaatatcattttccACTACTTTAAAAACTAAAACTGAAC GCCTACGCAACTCCATTGAGTCGTATATAGTAAATGAAACAAAAAGCTAA ACAAATAGGTAACGTACACGGTAATCcgatttaagaaaaaaataggaAGC TTAAGTTAAATATTCGAAATATGCTTGTATGCTTGtaccataaatttttt ttctcacttttttccTCAATCTCGACCCTAATAAAAGTTTTACAAAAGGG CAGTACAAATTCATCTTCCTGTAAAcctatgaaaatgcttcctacagGCC taacccctgtgtcacagacccactaggacCATCACCCCCAATGGAAAATT TTATGgcaaaaataccctagaatttcatccccattcgaaattagATATTT AGATATTGCACTCCAAAGCCATCCTCGCTGGATTTTTTAGCCTTGGcaca atagaattttcatctGGATTGGAATTTCAGTAGAAATTCTTTATCCCCGC CTTGTggggaaaagttccaccggggctgtgagacataCAGGGTGTTACAT AAAATCCTAAAAGATTCCATTCTTGTGTACAAAGATCACAGAAAACTTGG GTGTTGTTTTAAGGTGTAAGTGCACCGAAATGAATACAGGTGATTTAAAC ATAAACCTGGAAGCTGTTTTATGGTATGTACATCCAGGCTATCCACACAC TTAGCCTCTTAGATATGGAAGTTTTTATTTACATCCATTTTAATCCATTC CCTAGTACTGAACTCCCGGAATCATCTGATAAGCGGGAAAATtcctaggc ttctgctcatcctctagcgaaaataGTTTCTTAtatatataggaagtata tctatagaggtctgcgattcagactagaaaATTCCCGAGGAAATTCTGGC GCCGATAATGAGTGGCTGTAGTATAAAGATAGGGAATTCGGCTAGGCCGT GCAAATTCACCTGGCAGGAGCATCCCAGAGACTACCAAAGTAGTACTTGA TGTCACAATTAAAGGGTATAGGATCAAGGGTAATTGGAGCAATTCAGGGA GAAAAAACGCGCCCTCCCCCACCTTGGGGTAGATAGCTATGTAAAGGTGA GGGTGTCTACAACTGCGGTGACAAGAATATCTCGTTTTTAGAGAAATTTA TGTATGGGAACTTTTTCATTAGCTGATTAGCCTAGAGCTAGACTACTAAT TAATATCAGTTTTAGCTTCTTTTACAGTAGTAGAAAAACCTACCTAGATG TTTGCTTACTTTTCGAGTGTTTGAATTAGTATTACTATTCCAAATTCCCG TAcggctttttttcttctttttttctttgaggCAGGATTGCTCCTACGTT TTGTGTTAAAAGAATAGTGGTCTGGAAATCGAGACTATCAGCTGATTAGA AGTTTCGATATCTTCTAAAATCTACAGTAATTGAATAAGGCCATCGATTC CCATCTCAAAGAATTTGCTCATCAAAAAAAGTTGTAAGCGGACGTTGTTT GCAATCCTGGTTCGCATTccttataacaaaaaaaacCAAAGGGATACTGG CAGTCTATCTATAATTATTCCCTTTTTAATTATCGTATTTGATTGATTAA GCAGTACATTTGATAGAGGGAAATATAAGTGAATTTCTTAGAGTACAACT GCTTACAAAAGCATATTAGCACTTACGCTTCCTACATTTTTCACATTGTC CTTTGTCCAGAATCTCTATAAAAGACCAATATCAAGAACTGCAGAAATTC AAACAGATTCAACCATTGCAAAGAAGaagtcaaaataagaaagatAACAC AATACAAGGTAAGTGAGTAAGTTATAGTTTCTAGGTTTAAAAAGTTTAGG TCCAAAGTGAAGTGTGATTGTTGAGAGTAGGAGTAGTTTTTGGACTAGAT GATGCGCTCAAAAGGTCTAAGTGAGAGGCTTGGTTTGGTTGACGTTAGGG GAACCCGTTGATGCAGGTCTAGCGTTTATCTCAttaagaaatatgaaaaa aagttattctctaatttttgtccccgcagAAAATAACCAGATAaccaaat cctcactgcaaaatattgtgctatttttccatccccactggatcgctaga aaacaatagaattcaagtCCCCAGTCATAAGCAACATGGggatatcaatc cccatcgagtttcagttcgttatttttatccccacttgcTGAAAAAGTCC CACCGGGtcggtgagaagggggtgtattggATAGCAGACTGTAAATTATC GTTACGTGTTACTAAGGTTGCTTAGTATAAACAAAACATAGATTATCGGC TACGGAGTGTGCAAGGTTGTTGGTTCAACTCTGCTCCAGTCATACCTAGA AACTGAGAACTGGTAGTTGATGTCTTTCTACTTGATGCTCAGTTAAAAAG AAGGCAAAAGGGTAATTGGAGAAAGCCAGGGAGAAGAGTAGCGCCCTCTC CTACCTTCGGATAGACAGCCAAGAGCATTTTGGTCACCCTTGCAAACTAA CTCAGTATTACTTCATTGATTCTTTTTAGCTACCAATTAAGTTGTTGTTT ATACAAAATGCCGTGGTTCTATTGTTCAATTGTGATTTCGGTATCACTAA TTATTGGAGCAAACTCGCAAGGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00048983TCONS_00048983Clytia hemisphaericatranscript
TCONS_00048984TCONS_00048984Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_15supercontigscaffold_15:270501..277323 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.2 0.13 0.23 0.22 0.18 0.57 1.13 0.64 0.11 0.42 0.51 0.4 0.65 2.45 0.46 1.84 0.1 0.75 0.85 0.6 0.58 0.77 0.12 0.28 0.14 0.9 0.92 0.78 0 0.15