XLOC_031129 (gene) - C. hemisphaerica

Overview
NameXLOC_031129
Unique NameXLOC_031129
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_15:127841..133232-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031129 ID=XLOC_031129|Name=XLOC_031129|organism=Clytia hemisphaerica|type=gene|length=5392bp|location=Sequence derived from alignment at scaffold_15:127841..133232- (Clytia hemisphaerica)
CTCTCAAAAAATTAAGATTAGAGATATATTGCAAGTATAGGTGATTTCAG TACCTAACTCGAGATATTAAGCTTCAAAAAGCGCAAAAAAGTGGATAAAA CAGCTGTTTCTGGCTGAAATACACTGTTTTTAAGGGTTTTAAAAATTTTT TAAATGAACGATATTTCTTTTTCAGACAGGTAAGAATATTATGGGATTTT AAAAATACAAGAACAAATTTTTTTTAAATTGCATAATTTTGTATTTCAGA TAAAAAAAACTTAAAATGGGATGTGCATTCTGTAAAGATCCAAATCAGTC TAATAAAAATGTAAGTATATTATGCATGTTGATTCATTTTTGTGGCTATG CATAAGATATTTGGCCTAGGGGGGGGGGCTCTTTCTGTTCGGAGGTCAAA CTATTGGTAATAGCTCCTGAAATAATAGAGCTTTTGCCGTGAAATTTTCT GTAAATTCCTAACTTTTATTTTGCTTCAAAATAAAAAAAAATTTGACACT TAAATATTTTCACACCTTGAGCATGATGACATTTCTGNNCCAATACAAAT TTATTTTTAATGTCAAATATATCGTTTAAACCGTAATTTATTGAATATTT AGGATAAAATAAGCATTTTAAACTCAGGCAACTTTAGGCAACAATACAAT AGCTATTTATAAGAACAAAGGAAATTTTCGGTTTTTGTTCACTTTGGGCA TGATGAGTGACGTCATCAAAAAATTTTTTTTTCAAAAGTTACCTTACATG ACAAGGATCTTGTGTGCCAAATTTTATCCAAAAAGACCCACTAGATCAAA AGTTAAGAGGTGGTTCAGGAAAAGCCCCCCCCCCTAGTTCTGAACCGCCC CTAAAAGCCTAGGTTGAATAGGGTTAACTTAGTGAGTTTTAACAATTATA AGTCAACAAAAACATGTATTTAATGTTTGTTATGGGTGTTATGCTCCAAA AATTCATGTGCATTGGAATTACTTTACCAATTCCTCTTTATTTAGACTAC AGGCCACAGCCGCTAGCTTTCGAAAAGTAGTTTTTTCTTTGTCAAGTATA TAAAAAGCAACATAGTTCCAAAAACATTGCATAAATCTGATTAAAATTAT GATAGTCAAAACCAAAGTCCATTCACTTTAAGTGTACATTCTTGTGTGTG TTCTGATTCTTACTTTCCTTGCCATTTTTCGAACAATTGTTCAATTCTTT AATCTTTCTAAAAAATTGTTGAAAACTGTTGAAAAGAAAATTTGGAGATC AAAGATTTATGAAAAAAAATAATTTCAAAGATTTTTGTTACTCAAAACAA AAAATAAATGTGAACAAAATAAACTCTTTAAATCTTTTGATGCCAGAAAC TTCACTTTTAGGGTAAAAAGGTACTTTGAAACCTCCTGAGCCCCGCTATA TTAATATACGCAATAATGATGAGTTCCAATAAGGACGAAATGCATACACC TGCTCTGCTACCCAAATCTCCTGAGTGAATTTAGTTGGATAGAAATTTTC ATTTCTTCACATATAAATATATTTTTAAAACCATAAACAATAATATCATC ATAGTATAAGAAAGCCGCGGCTGGAATGATAACATCTGGATTTCTGTTGT TCTATCTCTGTATTTGATGACTATTTGTTGATCAAGAAATAAGTAATGTA GCATCTTTAATGGTAAATTTTATTGGTTTATCGTTAATACTTACTTCTCA GTGCATTTTAGACATTAATGATATGCCCTTGATAATACACTTGCATTATA AAATCATTGTGCAGGAAAGATCAACAATAAGAAATTTAAACAAGCACAAA ATGGCTGGGCTAAAAGAACTCAAAAATTAATAAAGTGCCTCGAAATGCCT TAACAATATTTCAGTGAAATCTTTTTAGAAATCAATGAAATAGTAAATCA AGATACTTCTGTGAAAATTTCAAGCCAGCATCTTCAAAATTTATCTTTCA AACTGACAGGAAAGTTGTCATTTTCAATATCGTTTCCACAAAATACCCCT AAAATATGTCCAAAATTAGTTTTAAGTGTTCTATTGGGTACAGATTCAAA GATATCTAGCAATAAAAAAACTTTTTGTGAGAGAAAATAAGAAAAAATTC AATAAACTGACAATCTTGATGTTCTTATAAAGCTCGGAGACAGAGATAGA ACAGCAATTAACTGAGAAGACAATGTGGTACATATTCCAGCCGCGGCTTT CTTATACTATGATATCATTGATGAGAATATTTTAGTAATTTGTTTGTTAT CGCTTATATAATGTTTATAAATAAATTTAGATTATCTAGGATTTCAAAAT ATCTTATTTTTTAGGACTCTGGAGAACCTGATGAAAGATCAAGGCTATTA GACAATCAACATCAACCTTCCGCTACTAAACCTATCACGTAAGATTCATA ATTTGTATAGAGGATGCTTTAACTTGAATTTTGAACTATCATACATCTNT TTTTGTTAATTCTTTTTTTACCGTAAAGAAGATGCTCTAACTTGAATTTT GAGCTATCATACACTAATTTGAAAAAGTAGTTCGAAAGTTATTTCCAAAA AACTGACTTTTTTTCCATGTCGAAATTTCAAAAAATCATTAAAAACAGCG AGCAAACTTTTCTTTTAACAATTACCTTCTTTACACATAAGAATACCAAA AAATGCAACTGTGCTCATCAAAACTCGTTGCGGAATTTAAGAATTATGGT AAAACAAGCTATTCCCATGTGGGATAATATTTTTGGAAAGGCTGAAAAAA AATTTTGGAAATCTTCAAGAGAGTTTCAATGTTATGTGTGTGCTATGTGA GAAAATGTTTGAAAAAAATAGATCACTATTCCTCGACTAGTTGCTCAAAG AACTTGGGTCTGCATTTAGTTAGCTGGAATTGGAAATGTTCATGACGTGC AAATAAGATAGAGAAACTGTTGGCAAAATATAAGATAAGAGAAAAAGCAA TAAAAAAACAATGAAATTGTGTTTTTGTCATTTTGTCTTATTTATAGCGT GATTGCTGTTTTTAATGATTTTTTGAAATTTCGACCTGGAAAAAAAAGTT AGTTTTTTAAAAATAACTTTCGAACTACTTTTTCAAATTTAATGTATGAT AGCTCAAATTCAAGTTAAAGCATCCTCTATACAATAAAGAAAGAATGAAC AAAAAAGCTAAATCCTGAAGCTCGCAATATCTCGACAAAGTTGTATACTT TTTTTTGGCGCACCCGGTATATATTGCATGACTGAAAATAAATAAATTAT GAATTTTCTTTTTGATTTACAGGGATGACTCCAATTATCACTCTACAAAT TCTATAACGAAAACAGACGAACAGTCACAATTGAGTAGGATATTACACAA AACAGCACAGTATGTCGACACTTTTCAAAAAATATTTCCTTTGTTTTTAA GGCCGTTAAGGTAGAGTCTAAAAATCTGTGGAAGCCTTGAAAATTGTCTG ATATTTTTGCATTTTTGGATTTTACATACCCATTCCTGGCGTGGAGTCCG AATATATTGATTTTTCCCTCTGGGGACAATAGTTTTTTTGCCAAGTTGAG CTTGAGGCTAAAACATAGGGCCAGTCTTGAGACCCCAAAAAAGAGTCCCA TTTGGCTGAAATCTTACACAAATACCTGGTACAAAAATCAAAATTCTGAT TTTTTAGCTTGGGGACAACATTGTCCTAACACAAGGCTTAAATTTAAGTC AGCTTGTTGTTGACTTCATTAACTGAAGTGTTATATGCTTGCTTTTTAAT GTGGAACGTTTTTTTTTTCATTTTTCAAAGATTTGGTTTTTATGGGTTTG GAGGGGTTTCTGGCTTGCTCAGTTTGGCATTCCAGTATTCAAGGTGAACC AGTGGTGCACATATTTGACTATAATATATCAATTTAATTCGAATTTTAGA AATATAATAGACGTGTCAGCAATCGAACCTCACAGTATGGAACGTTCAGA ATATATGGATAAGATGAGACATTATATGTAAGTTTTTTTAAGAGCTTTTG TCCAAAAGCCCCTACACATACACCTTTTTAGAGGGGTGTGACCACCCTCT ACGTCTATTTACATGAAAACTTGTCAACTTAATTTAACTTTTATTCGTGG TCTGTGATGGTTTTGATCGCCTTGATTGTTGATATAGGCTCGTTTTCTCT TGTGTTCTTTTCTATTACCGAAACATTTACAAGCACTTCCTTTTAAACCT TTCTTAGAGGGGAATGGGGAATGGTTTGTTATCTTCGGTAAAAGGATAGC TCTTATTGCCAGCATTCTGTATGAAGAATGAAATATTAACTTTACTGATA CTTTACTTCTAAAATATCCTTTAGAGAGAAGACTACGAACAGTGATTTCA ATTTTTCAAAACAAAAGCAACTGAATCAAGTTACACATGCTCCACTGAAC ATTTTATTAGCGCCCAACATCAGTGCATCAGATATCAAATTAGTAAGTAC AACTCATATTGGATTGTGGTACATTCTTGTACATTTTTATCAAATCGATT ATTTTCTAGTAGCGAGAAAGCATGATTCATTTTTTGTTTCTTATCATTAC TGGTATTTGTCGAGGGTTGGCATAACTGTAAAATTAGAGCAGCACAAGGC TAGCACGAGCTAAGGTTAACAAATAATAGTGTGTTCTGCTCGAAAGTAAA ACAACATCAAACTTCTCAGTCTCCCCGTGGTATTACCAGATCTGGGCTAT TACAAAAAAAGTGGAGCTTATATAACTGCGTTTATGATCTTGGAAATGTT TGTAACTAGGGATTTTTTCTACAAATACTAACGACTTTCATTCAAATTCA ATTGCGTTTATGTTTTCAGATAACAGAAGCTAGTCACAACGTATCTGGAG CTTTATCACAAGCTAAAATCACGTGTAGCGATAGTCTAGTGGAAAACTTC GATGTCGATAATTCACCAGTACCTGTGGTGACGTAGCATTGTCTATTGGT AATGGGTAATTCTATTATCAATTGGATCATTAGGTTGAAACGAATTCGAA ATTATGATAATAATAAACAATTATTGAATGCACACTTAATTTTCATAAAA TGACAAATCACCCTATTTGAGGAGGATTTTTTTTAGAGAAAGATTAAAAT AATAATTAATATACTTGGATTATTTTTTTTTTGAAAGAATTTTGTTATCT TGATGACTATATCAATTTAGAATCAAAAACGGTTGAAAAGGTCTAACACA GAACGCACAGAGAGACACCTGACACCTTATGTTATTCGAAAGGGAAGCGA CTGGGTTGTGAGGGTGGCCCAGAAAGTCTTGCACTTTTTCAGCATATAAG ATTCCATCATTTTAAGGAAAAACAACAACTGTGGTTTAACTCAATAAAAA GTTTGTTGAACACTTGCACAATTGATCTTTAGTTAGTTATAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00049005TCONS_00049005Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00049005-proteinTCONS_00049005-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_15supercontigscaffold_15:127841..133232 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
LAMTOR1ragulator complex protein LAMTOR1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
45.19 49.69 30.54 26.65 39.75 32.1 38.53 39.85 40.72 35.28 33.96 25.31 22.42 19.58 35.6 35.46 38.94 30.18 19.26 28.72 18.38 19.31 33.49 37.64 23.84 29.28 23.59 20.76 38.81 33.66