XLOC_031249 (gene) - C. hemisphaerica

Overview
NameXLOC_031249
Unique NameXLOC_031249
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_154:211020..217821+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031249 ID=XLOC_031249|Name=XLOC_031249|organism=Clytia hemisphaerica|type=gene|length=6802bp|location=Sequence derived from alignment at scaffold_154:211020..217821+ (Clytia hemisphaerica)
GAAATTTTCACCTTTGAGGGTCTTTCGCTAAAATTTAGTCATTTAAAGGA TCAGACTTCAGATGTCCGGTTAGCACCATACTTGACATTCTCCGAACCCT GGTGATGATGGTTGGGTTGAGGTGGAGGAGAGGTGAAGGAATTCGTATGG CTTGGTTACCTGATTGGTTaatattttactgaccagaatGTGAACATTGC TTAGATGTAACGAAAATATGGcgataaaaaattgtttcaagTTGATATTt ggtactttacagaccagTTCTATAAAATACCTATTCGAATTTTCAGAAAC ACGGGACCTATACTTTGGTATTTGAGTTANAGTTGATATTtggtacttta cagaccagTTCTATAAAATACCTATTCGAATTTTCAGAAACACGGGACCA ATACTTTGGTATTTGAGTTAAAATTTGGACTACATATGGCAAGAGTAAGT GCAAAATCTAGATAAGTACTTAACAGACCTGCCAGTATTGAAGGAAGTTG CTTGTTTTCCTTAGGCCTAGCGGAACAATCGTAAAAGTGAgaaggctgaa ggctcaaattgacataaaattcgctaggaatttgagaaaaaaaaatctca tttgctcaaaattgAGGAGGTTGAAGGCTCAAATagagataaaattcgct aggaatttgaaaaaaaaaaatctcatttgctcaaaagtgagGAGGTTGAA GTCTCCCAGTCTCCCCACTTCCGTCAGGCCTGTTCCTAAATAACCATTGG TTTTTTTCCTATTTAAGTGCTGTGAAATTGACAGCGAGCTTTTATCACCA ATACCGATAACACTTGAATTGAAGACCGAACTTGTTTTTCTTAAACCCAT CAAGAGAGGCTCAAGATTGTTTTTCCGCATTTATGGATCGATTTCAACAG TTACTGCGTCGGCGTTCAACAAATATTTATTCACATAATATCGTTGTCTT TCCAGATAACAATAATAGTCTTATTACCACTTTCCATTTTCGTCATACAT AAGGGCTACTTAATATATTGTGTAGCATACACTACACATTTATAGTCCTA TAGTTATGTACTCGAAAATAGTACTTAGCTCGCATGTTGAATGACGAAAA AAGAAAGggtttattattgttttttgattttctctacTTAGTCATCGAAA CATTGCTATTTAATATTTAAGTGCCATTGTCGggtatatcagacatgggc tatgtaggagggcgaagccctgctgtaatgcccagtttgagttagaaatc gtcatttttggtctaactcgttgAAATAGGCTTCAttgttaagcaaaaaa aatcaaaagtgagtctttccagcgatattttaagccaaaaaatcaaaaga atgcaaaaattggacaaaaatccacttttttgagattttgaacGTTTTTG ACCGTATTGGTCAACGgtgagtgatccaagaacctccaaaatgGGGGAGG GGGGAGGCGCgaacggggtttgcgatttccaaaataccgaataattttgc caaaatttccgaattTCCGTAAAAacatacttgcaattccgagaccgatt ttttgggtatttttcctcgttttgactaatttttcatcaaatttgatttt tcatgtatgaataccgaaaaagggggataaaaactttataataccgaaat ttcaaagcaaaaattcatggatttccgataccgaaacaattgcagaattc cgaaataccgaaggaattttgaccgatttccgaagaaaaaagggtcgatt tccgcccCCACCAAAATTGGCCCTGCTTTACCTGATTCTGTCCTCTAGTA AatgaatttgaagttttaccactggtcACCTTTCcgtcattcaggcaggt ccgcgcAGAGTAATGTCCGTCGGGATAATGTCTGCCGGGGGAAACATCGT CTAGGTATAGTCGTACAAAGTACAAAAACAGTAGTACAAAAACGAATGAG GGAGAATCGTCCATTCGATAGCCGTTCGTCGGAGAAAAACTCGTTTGGGA AAAGTCGAGTTCTATGAGTTCTCTACAGGTGGTtcacaaatattttttgt gttttgagcCATGGAAAATGGCCATTTATTTGGCCATAATAAAACCGTTT CATGTATAGAAAATGTATTTTCGTAAACATATGTGTCCTTTGAGAATTTA ATTTGCTGCCAATCTCGGTTTGAAATCTTTCAACCCGACTAGACAGGAAT TGCCTCTTCACGTGTCCTCAAAGAAAGTACTTTTCaactttaagggaaga aaagCAAAGTGCAAACAGTGCATTGTTGTACACCAaagtatatttttcat tttaatgatCAAATGCCTGCTGTAATAGAGCGTCCCCCAGTATAACGCCA TaacaccaaaaaaaattcttttatcaatcacttatCACGCTTTTTGGAAT CATAGTTCACATCATCACGCCAAAAAAGGCCCAGTCACAAcgtcacgcaa accgctggggggacTCTGTATTAGAAAAACGGATCTCGATCGTCTCTCAC AAGCAAAATGTTAGGATTGAGAATATAAACAAAGCAATTACTTACGTACA ACAACCATTAGCTTAATTTGATTCCATCTGTTGGGCCACCACATGCGTCT TCTGATGAAACAGCGTATATCTCTTTCACAACCTTTACGTAGAAATATAC AAAgctattttaaaaactttacagcTCGGACTTGGTGTCAGGTGCGAGCG CAAGGGTATCGAACGTACGCCATTTTTCAGAAAGAGTACCACAGAACCGC AGAATGATACAAAAATAAAGTCCTTCTCGGGGATGACTTAAGCCTCAACT TTGGTGCCACAGCTTCCGTGAATCTCACGATATGGAAAGAAATTAAGAGG GTTTCTGCTGACGAAAAGGCTTCTTATAGGAACTCTAGGAAGTATAGAGG TCTGCAAATCAATCTATGAATTAAGTTGGTTCATTTCCTGAACCAAGAGC TTAAAGTTTGATGTTACATCCTTACATGGATGGGAATTATGCACCAGCTT CTCTGAAATCTAGTAGGCcaatacaaaaataaacatcAGACCAGAAATTT CGTGATTCGAGAAGAAAGTGTAAGCTGACGAGCTTTTTATCTCCGgagat ggggggggggggtcacttAAATTAGGCCTATAAAATCGGAGCCTTACAGA GCAGAGAGAATTTAACCAAATTTGAGTAAAATCAGCCCTTATTAAGGTGC ATTTTCTTGCTATTCACGTATGAAATATAATTCTACCTAAAGTTAGTTAG TTATattaaacaaaatcaaattaaatattttaacACTAGCTTAAGAATAT CATGAATGTTTGCTTTTcagttaaatgaaaaaaaaagaaatctaaagATT TCGCTTAGTTTTGTGAAAAACATGTGTATAAATCACACAAGCTAACGGTA gtgaaaattaaatgaaatataTATATGTTCCGTTCAtcgatattttatta ttttgaaaattcaagattgggctcttccagaaaaaatccgttcattgGGT GGATGATTATTATTTCTTtaatgaattacccctggacattttcatttttc accccatggacatggGTTTTACCCATTGATTGACAATTATcaatttaacc ccctggacaccaAAATTTACTCTTGGACATCGCAGATTTATCCCCTGGAC AATGCATTTTTTAGGACTTTTTTCGggacccctggacaattcatcttcca cccccccccctatgAACGGATTTCTTTTCTGGAAGAGCTCATTTCTTTCC TATAAAGGCATCATTATTATCTACGTTTTTTAATTATATCTTTGGTTTAT AGGTATCTCTACAAAAAGCCAtggttaaattattttcaattgcaGTATTA ACGTTTCTTATGGTCTTATCAGTGGATGGAACTAAAAAAGGAAGCGATGG AAACAAGAATGGCCCACAACATCCTATTTGTCAAGGTACacgaatttcaa atttcaaaaattttgatttagtgCAGTCAAATCTAaccttttttgtcatt ctaagAAGATTGTTGGTCCCTTTTAAGGTCCAATTTGGAGAGAATCAAAA ATCCATATTAATTGAGAATGTGTCCATTATAATACATCTATTACAAGGGG TACAAGAACCATATTTTCTATCATGTGGAAACCATGCCATCGTTATTGAC TTATATTCTCTTGAGGAGTGGTTTCTACACTACAAAAAtgagtgcacact taaagctttttcaaTGTACCTGATATGAGCAAAATATCACGCCGTCTTTA CAAGCAAACCACAtttcggtgccggcaatttgatcaataAAGTCCATTCT CTTGCCTCCTTGTTTCCAACTGTGCCAGTTATTTGTTctggttaaaaaaa ttgccggtaccgaGCTCTGGTCTACTAATGTGATCTACTCAGCACAAATG GCTAGAACTGCCGAGGAAAGACAGTAGCTCCTCTAGTGTTTGAGATATTT GTGCTATGAAATAGGGGTGTTAAATAAGTTAGAGCTCCCAATATAGATGT CCATCTCACTTTTTGAATCATTCGACACTGTCTTCAACCCATGTTCAGAT GTCAGATTTTAGCCTGTAATTTTTTCATTGCCATTCTAATATTTAGTACT TCCACCAACCCAATTACGAAGATTTTTGGGCAAAGGTCGTATCAAAAATG GGAAAGTAATGAGGTTTGGTATGGGAAAGAAGACAATCTGCATGATCTGC AAAGATGGTGAGTGAAAACTTATAACCTTCAAGCCACCAGGAATAATAGG TTTGATAGTAGCccagggtccacttaaagctttttttatagactgaaCGG CGCGACTAAGTGGCTCAGTAATATACGGTAATTTGCTTTTGCTTAGATGC ACTGTAaaccagattttagttgtttttggaaggtaaaaatagTATGAGGC Aacgtttttatttgagaataagggattgcaaatctgttattgatgtttgt ttctcatttttgattatatctttcaactccaagtaattttattgttattt ggatttttaacattttctctcaaaatggcaacctcgccaaacgctcctag tctacttcactggactcagcgtcaaaTTTTAGTTTGATAGGAGGTGATGG GTACGACAGAGCAAAAATTCGGGACAAAATTTGATCCCTTTATAGTCAAG ttaatacatatttttttagtttttggccgaaaatttctaatttcctACAG AAAATGTATGCTcttttgagagaattttttagcttttgatCAGTAACTAT AAAGTTGATTCTGGGTATCTTATGAGTTGTTAAAAGATTCTAGATCTGTT GAAGAAGATACTTAACCTATATTCTTGCATCCACCCTCACTTCCCGGAAA CACCACTATTCATGAATCGGTCAAATATATTGCTGATAGAgtgaactctc tctaattcgaacctctattattcgaatctttctgtagttCGAATAATAGT ATTTCATCCCCTCAGATTGAGAGTCTTATAAAacactctctgtaattcga agaaagttttttgtcccttgaagatcgaattacagaaaattataacaaaa tCTTCNAATTcgaagaaagttttttgtcccttgaagatcgaattacagaa agtcaACTTTATAACAAAATCTtcggacgagatggagtttttacaagctc ttatttgatttggttggtcgttaaccagtaataaaacaattttgttactt tttctaaagaacgcatcatGTCTATtatacttcaaatgaccaattattaa agtatcttaaaaacttcatctcatctgaaaatcttcatttctttcatttc aaaGGTAATTTATTGCCAGTCAAATGCAAGATGACCAAAGAACAACGATG GTACAATAAGAAGAATCAATAGAAACATAGATATTAACACCAAATGTAGA CCGGCTTTATATCACGCGGGACATATCAACAAGAGTTATCAATAATTTCA ACTgtctttattttcaataaagatTTTACACAGTATAATTTCTTTCTTCt caattttgatataaaatttcgtcacttttgatttaaaaaataaatatgct acTGTAATCCTTAAAAGTTAATTTCTACATACAATACAATTGTGCACCAG GTGAATTATGAAAATTAATGTCagcgaaaaaaaaactttagagGCAAAGC TTATTTGTATCAACGCTTTGGTTGAGACATATACATTCTTCTCcagatga aaataataaaaacatcGATATACATCTTGCAAGTAAACACAGCCCTGTGT CACGGTCTTAGTGGGACAGGACCCGGCccattggaaaatttggccGAGAT TTCGTCCCGGAGGGAAAATACtcaaattgactttgttttatACCCATTTA ATaaatcaatagaccttttcataaattacgtcacgaacatcacttgcctc gttttgaagttattgccaaggtgattaactcccagcggattttatttgaa ctactttctatttttgaaaaatcatttaatgtctcaagggacataatcac catggtaattgtttgaatacgaggcaagtgatgttcgtgacgtaatttat gaaaaggtctattggaaaaaaattgcatAGCAAAACACATGAAAACCATA GCATTTTtaagatttcgatagaaattttcatcctcaCTCTGGGAAGAAGT TCCATCGGGGCTGTGTGATGGAGGTATGTAAATCTGTAAACAGAATCATT ACTTGAGCTCCAGGTTGTGGGGAAAAAACGAGACTAAAAATCAGACCACG CAACACTTCCACTGAGCACTCTTTGTCCAATCAACACTTTGACTTGGTTT GA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00049215TCONS_00049215Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_154supercontigscaffold_154:211020..217821 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.3 0.32 0.11 0.07 0.52 0.35 0.26 0.38 0.13 0.11 0.32 0.16 6.99 6.37 1.29 2.01 1.79 2.67 23.43 19.6 12.9 12.47 5.08 6.77 7.38 8.21 0.41 0.62 0.39 0.31