XLOC_031257 (gene) - C. hemisphaerica

Overview
NameXLOC_031257
Unique NameXLOC_031257
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_154:447013..452467+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031257 ID=XLOC_031257|Name=XLOC_031257|organism=Clytia hemisphaerica|type=gene|length=5455bp|location=Sequence derived from alignment at scaffold_154:447013..452467+ (Clytia hemisphaerica)
ttccaATTAGAAGAGTTCAATGTATCTTTCTTGTTTTTCAGGACAAAATG
TACGGTAAACCGTCTAACCATCAAACGCTCAGACAATTGAGTAACGAACA
TTGTGTTCAAGATGTGGAAGAAGCGCAGCCGACGGCCGAATGGACAGTTC
ATCCCGCCAATGTAAAGTATTAATTCATGAAATTCATTATTTACGTATAC
TTTAAATggaataaattttcgcggggatttgaTTTCACGGATGGATATCA
AAgattccaaaatggtacttgatgcttcTCTTCTTCGGGTtgtagctatc
gaaagaggagccttcgggtttcttccgactgcggtcgcagattTACTTAC
TAAATGATGTCCTTCAAGAGGGGTTTTAATTGAGTTCTAAAATTTGCAAC
CGTTTTCATTTAAACCCATAGGTgtaaccatggaggtataaagaaaaaca
ggagttgaatgtgtcggtaattggtcgttaaagtcttttgatttctttta
taaaatgtatcaaaagaaaatctaaGCTCGCctgatgaaataagactttt
tagtagaactcaagtttgctctgaNTTAAGCTCGCctgatgaaataagac
tttttagtagaactcaagtttgctctgaacattctaattatcagtattga
agattgtagccttttaatatacgaaaattaaataaatcttcgtccacgaa
acaagttTGTGTTCCATTTTTCGTTATCTGTTCAATTTattttctcaggc
aagaaaatttataagcacacacaatttcagactcaatttatAGACATAAA
GTCGTTGGAGAAtcttggaggaaagtatcaagcaatagagttcgccttga
agaaaacattgatcgaaaaatcttattattTGACGAGGGATTGCCAAGTT
TGCAGGCcttttttttagtccaaatattttcttacactgatgtcagaaac
aatgaatctcgtctcaactaatttttaaagcttcaatgagccaataaaat
ttcaccgatggataaaagagcttattaaaaatgcacgataaatgagatta
tgagcatgcatacatcgtaacttttttaaccgtagggcgagcttggttac
aatagcatacttctcctgtttctttataccttcATGGTGTAACTTTGGGA
TTGCCTATTATTTTCTTTATATTAAAGCATACTTTTTTTGCTATTTGACA
GATGAAATTCCGGACAAAGGATGAAGGTCTAAATCACGGACATTTGAAAG
GAGAGGGTAATGCGCAATACCCTCAATTTGCGGTACGTATTCCATTACAG
tttactctctctaattcgatctttaaatgacttaaaattttcttcgaatt
agagaaagaatcGAATTGCAGAGAGTGATTTATACCACTTTTCAGCTTGG
GGTACTAATATTTcagtttgaattagagagagagttgaGTGTAGTAAGAT
TTTGTACTAAATCCTTGTGACGAGATAGAACTTAGAATTCCTCAATCTTT
AAGCTGAGTATGTTGCTATCTATAAAGTATCCTGTATGTGTGCAAGGCTC
ATAACATTTAATAGTACATTTTTTAGACTGTTGTAGTTTAGTTTCATCAG
ATTAACAACTACCCCAGCTTGCACgcaacgttgaaacaacgctgtgtgcc
aGCTTGGATAGTGGCTAAAACGATTCAACGCTATTTTGGCCAATTGATTG
CATAGCTATTCTGGTTTCTTAACACCATAATTGGCAGTGCGATATTTTAC
TTACTCACCGATTCTTAATAGAGAATTCTTTAATCTGTCCATTGTAGTTC
CTATGTGGTTTTCACTGGCCTACTTTCTGCTACTCAGTGTACTTGATCAT
CCATTTTATAGACATAAGGCTTCTTCAGGTAAAGGACTTTGTGGCTATTA
TCAAACAAGATTCACCTTATTTGATAGCTACCGTATTACTTATTTTAAAC
GCCcctcttcttttaaacgccccaccCCATCGTATAAACTTTTCCTGCTT
TTTCCAACAGGTTACAAATCCGACACCCAACACGTTGTTTATGGCGTCCG
TATGCATGCTAGTCACTGACGAAGACGGTCATTATATTCATCCACATGCT
GTGGTTGACAAGAAAACTAAAACAGAAGTTGGCGCCCGGTGCTTTTGTGT
TCCGCCTCATTCTACCACCACCGTGgagtaagtttgaaaaactgTTTTCT
CCCAAGGTACATTTGGCTGTTTCATTTAATATCAAAGCAGGGAGTAGTAC
GAATCTTTCCAAcctaaaaaaatcttgaatttatgTGGATAatcctggaa
aatggcaaaattttcgaaaagctctctggaaaaataaaaattctgtTGAC
CATCGAAAAATTCTACTTTATACTCTAAGGTGAGGGTGGACGATCTAAAA
TCAAACGTTTACCCAGTTTTCAGAATAAGTTAAACCTCCTGGAAATTTAA
ATTACGTCACCGGAAATTTGTAAAAACTTCCTTCGAACTCTTGAAATATA
AACGAGCTAACCATAATGCTTAGTCATTCCTTGGAGGCATGGAAGCACTT
agcaaaaaaaactaaaatcaaacTGCCTtgtaaaatgcaaaaaaattccC
TTCTTTTTGGACCACCTGAAAATGTTTACACACCCAATGTATGAATATAA
AATGGAATTTCCCATGAAACTTGAAACGTCAACGCTACAAATAGGTGTGT
GTTTggtcgtcaatcagttttttcaaagtcaaaattatatcatttttcct
atcggaaacacccgaaaaatctggaagCAATGtgacctctgtttttctat
ttatagtaatacacaggggtcaaattccagtttttccagGTGTTTCGGAT
AGGAAAAAtgcatgacgtaatcttgacttatgcatatcaaaaattttttg
acaactgGTGGGTCATATCAAAGGGCCCCGGCttgagggctgaggtatat
ttgagtaaattgacaaagcccaccatggttgagcaacggagaaaattttt
gaattttgaagggttcaaagtgctattttaggacctatttcaattcaatt
tgaaaaataattcaaaaataatggaaatcctttaaaagtacaagcagctt
ttttggtaaaaacataAGGGGCCATGCCCCCTCTGGTCCCCCGTTGACGG
GTCCCATGagcattaattgtgaattagcgtgaatagttttcaaaagggga
aaGAGGAGGCGCAGCCATGGTTtgtgccgacgggagaaattttcaaccct
ctcatagcattcgactttattttgaagactagctagcaactaATAAAGAC
AATTGGAAACAAGCTACAAGCTAAAtatttcaaaccatctgattatctct
TTCAGGTGATCAAAAAAGTTTAGGGTTTTGATGGCTAAGCTGTGTAGAGA
TTAGTAAATATTTAGTAACATTCGCTTTTCATTATGATTAGAATAGGAGA
CTTTGTTTTACTCTCCAGTCaaaattcatatttcaaaacttctaAAATAA
GGTAAAGCATGTTGCTTTTCATGTGAACAGAAGATAACTTTTTTTCCCTT
TTATTTTTCAGTATTAAAGATCTTGCCATTCGtcgaattttacaaaaata
ctttCGCTACTTTATCAAGAAACTCACGGACGAGAACGACAACCTTTACA
CTGCAGAAGATATTTATCAAGTTTATGATTTCAAACATTCGATCGAAAGT
CAACTCGATTTAGACAATTTACCAAAGGAAGCTCACAAGGGATATAAACA
AGGCGGGAAACAAGGCAAAGAGAACAAAAGTGAGTTTCACCGATTTGTGT
AATTGAAATATCTGGGTGTTCCTAACAATTTTCTGGTATATATATGATTA
TCCTCCACCTCTAGGCAAAACGCactgtcgaatatttttagatatccgat
agcaaaatatctcctctgtagcagcgagcataaagaaaatagtttattga
tcaaataattatttaaatgtcACATATATAAAAACAGATAAACAGAAAGG
TCTTTTTAACAAAAGGGAaaggaaattcgaacgttttgtaattaattttg
atttttcttatcgaaaatctgCTTAATATTCCCCCAAATAGTTCACTTCA
TACCAGTATATGATTATTCGTCTATCTGCCCTTGTTTGGTAATGAGATGT
TCCATTTAATATCCATACACAGCCAGTGATTCTTTTAAGCACTTTGAGCG
GGGCCGTTTTTGTAAACTTAGATTGCATCTCTAATATGCCTGAAAGGGAA
CTTGCTCAGCAAAGCTGTATATTTGTGAAGCTGGGGGTCTTGTGGTTGTT
CAGAGGGCGAAGCTCTCAATAACTTTTGTATATGTAGATAACAATTAGTT
ATTGTTGCtcataaacaacaaaatagATTAATTTCgttaaaaaaatctca
tttattttggattgagtttcaaaactcaATCTTAGAAAGGTGGATTCGAG
ccgaaaaaaattcttcaatttttttggatATCCCCTGGATAGAATCTTGC
AAAAGGCCCCTCGAAAAGGGATAATtgttcttggaaaaattctgtTTTAC
ACCGTAAAGTGAGGATACAACTATAATCTTTTGCCCCTTTGAAATTTGAG
AATCGACTTTTATTCAGGGGTATTCCTTAGAAATTTAAATCAGGTCCCTT
CTCAAAAACTTTTATGGAACTTAAATATGAAGGAACATATCATTTCAcag
ttttaaaaacttttttcttcctttataGCTATCCGAGAATTATGCAAACT
GATCAGTTTAAAGGAAGTGTATTTGAAAATCGACATCTTTATTCTTCCTT
CATCACCAGAAGAAAAGAACGTTCTATCGTTCCCAAGACAAGATCAGTTG
GAAATGCTGCGCGTGAATTATAGAAAATTAGCAACGCTCGCTCCCAAGCC
TATTCGTGAACCGGGAAATTGGAAACCAGCCGACGAAGAAACGCCCATAA
ACAGTGTGCCAAACCATATCACGCCTAATGACCGGAGTAATAACGCCCAG
CCAAACTTGTTTCGACAAACTGGAGACGCAGACCAAAGCATTTCGTTAAT
CACTCCAGAAGTATCCCAAATGGTCACGGTGGAAAATTCTGAAGTACCGA
GAAACCCCTTCGGAGGCAACGGCATTCAGGTGTTTGGCCAAAGTAATAAC
TATCCTAGCGCAAATGCTCTTTTCTCCCAAACATCTAACTCGATGGAAAA
GCATAGGAAAGATCATACTTCACAATTCATGGTCAACCCTCACTGGAATA
CACCAATAAACACATTTGATGGTTATGCTTTCACACCATCTCAAACACAA
ATCCCAAACAATCCAACATATTTTCAGACATACCAGAAAACGGAACTCAA
CCGACAAAGCATAGCTTTACGAGACACTGAGTTTATGACTCAGACTCCAG
CTATAACTGGATATGACACAGACTGTGTCCACCCTATAACTAGTCCCATG
ACCGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00049223TCONS_00049223Clytia hemisphaericatranscript
TCONS_00049224TCONS_00049224Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00049223-proteinTCONS_00049223-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_154supercontigscaffold_154:447013..452467 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
14.97	15.69	10.81	10.89	2.36	1.72	2.32	2.9	2.24	5.57	4	3.51	13.27	11.9	16.55	18.67	5.2	14.44	19.39	33.57	4.31	4.46	9.61	10.4	3.1	4.71	51.17	45.88	22.57	24.25