XLOC_031352 (gene) - C. hemisphaerica

Overview
NameXLOC_031352
Unique NameXLOC_031352
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_156:38583..42103+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031352 ID=XLOC_031352|Name=XLOC_031352|organism=Clytia hemisphaerica|type=gene|length=3521bp|location=Sequence derived from alignment at scaffold_156:38583..42103+ (Clytia hemisphaerica)
TACACATAGCGGTGAGAGACAGTGAGAAAAATGCTAGATCACCATGGAGG
AGGAAACTCTAAATTACAGAGACTTTTCTTGGTGCTTCTCGGTGGGGTGA
TTGTTTTGTTGGCATTAGAAGGATTGTCGATGGTCAGAAGTGAAGCAAGG
TGTACTATACAACAAGGTAGGAGAATGTTCTTTTGATctacacaccccct
tctcacggaCCTACTGGGACCCCTtgtcactggaaaaattggccaaaata
tcatcccgGGTGGAGAATTGTTCTCTAATATTGGCatccgctgaaaataa
tcaattggtatattatgctattttttccattcccactgaattttctggct
tgaaaacaatagaattcaaatccccagctataaaaaaatatgggaatatc
aattcccatcgtcctcaggccctttaagtggatttcttttcggaaaaaaa
gttgattctactaaccatttttgaaacatcattactctttcaaaaaaaat
tattttcaaaattgtttttcaacTTCATGACGAGAAAAGATAGAATTTTA
ATATGGTTACAATGATACCCATCAAGTCGGTGAAAAATTTACATAGAACT
TCATTAATGTGgaaaaaatcgctaaaaaatacataaaatggcGCCTCCGC
GGGATACAGCGTTGAGCTTTTCACCTCAACTTTTNATATGGTTACAATGA
TACCCATCAAGTCGGTGAAAAATTTACATAGAACTTCATTAATGTGgaaa
aaatcgctaaaaaatacataaaatggcGCCTCCGCGGGATACGGTGTTGA
GCTTTTCACCTCAACTTTTGTACACGAGTACTTCAAGCAGGTGGCTATTC
GAAACTACCTCAATAGTGAAAGATATATTTGTAGTCTTTTCTCTATGCAA
GAAAGAATTACCAAAACTTCAGTATTTTCACTTGAGTTCAAAGTTCAAGC
CGTATTTTAACTATATTGCACAATGAAACCCTCCACTACAGAGGTACTTT
CAATATACTTGCTCTCCTCCCTACTgccttggaaaataaaaatcacGAAT
TTCCAATTTTGTATCGCGCGGAATGTAGGAAAAACATAGTTTCTCCaaga
aaatactcaaaaaaaggAAGGTACAGGCCAATGGGTAAACCTGTTTGTTA
AAAATGGTTGATTGACAAGTAGATTCTTACGCAATAAGCCAGTaatcaaa
tttataaagaagACGCACTTCTTTCGTTCTTTTGAGCATAAACCAATTAG
CTCTCtctcttatttttttcttaaaagaatgtttacaagaataagatttc
gtttattaaataatcttttaaaagtgttgATTGATGCGTGAGGCTTTCTC
ATTGAACATACAACTCTGTCGGTGTTTTTTTAGACTGTACCAGAGAGATC
TTAGAAAAGAGGGAAAAGACAATTTTCGTTTCAGAACCACTTAAAGGGCC
TgagtctgttatttttacccccactggctgaaaatgTGTATCTACCCCTA
TTACTTTGAAACAGCCATGTCTCATATCGACACAAATTCAAGTCCAAGTT
CAATCTGTATTTAGAACCAGTTGCACCTCTTTTTGATCTTACTGATGGAC
ATTTGTGCGAATCattaaatcataaaaaaagcgGACAGcgagggactggg
ttcgaggtTAATCCGAGTGGGAAATGAGTTTCTGTATTTCGGCCAaaaga
ataaaatgaaatagGATTTGAAGAGCAAATTTAGTGCTTACGTCAAACTA
GCACACTAGCCCTTTAAGTAACTACCGATGTCGGCATTTGTATGTATTTC
AGAAAATAAAGTTAAATGTGATGGTAAATTCTCTTGTCGCTCATGttggc
atatgccgacatctggtaaataggtcgaaccttcttttttcctgacaaat
aggtcgaaccttaaaaaatacgcaCGTCATTAAAGGgcttttacatttga
aaatgaCCACCGATGTCTTCATTGCTTTCATTTCAGTTCCAGTTGTGATA
CAACAAGGAGATAGGCGGGAAAAGGTAAATTCTTGATTTGTATCAGCGTT
CCCAATTtcaacttttatttaaaagctgTTTCTATTTAGTACAAACTACG
CAGCAGTCGAGGTTATAATGAAAGATTATTGTGGAAATTTGTCCTAAGAA
GTGCACAGTGTAAAAAATCTCAGCCAAGCCCGCTATCCCGAAGTTTTAAG
CTCGTTTCGACAAACACTTATTACCATTTTAAGCTAGTCTGATCCAAATT
ATTTAAATTCCCGAACtcatatcaaaattttcttaTCAGGTTCCAAGAGA
GTTTGATCTTCCAGACACTCATTCTGAACGACgtctaaaaacaacaaaaa
ccacAAGAAAAACTGTCCCAACGACTGAAGCCAAAACAACAGCTGAACCT
GTGACAGATGAAAACATAGCTACAGACACACCAGCACCAGTTATCGATCA
GAATCGCCAAACACAACTCCAGCGTCAACAACATTTGAAAGAGTTTTGCC
AAAACAATCGAAGATTACGGACGGAAAAGTTCAAAATCCGAGATTTCCAT
TTCATATATAGCGACAAAGCGTCCGCTCTATATTGTTATATCCCAAAAGT
GGCTTGCACTAATTGGAAAAAGGTGTTCCAAGTGATGGATGGGAATTATG
AAACTCCTTTAGATATCAAGGGTAAagaaaaagttcattatttaaaGTTC
AATACTTTTGAGAAAACGAATTTAACTGAAATCGAGTGGCGTCGAAATTT
GTATTATTCTTTCTTGTTCATACGGCACCCCTTTGAAAGGGTTTTATCAG
CATACAGAAATAAGTTTCAAGATCCCTACAACGAACAGTACCAACGTGTG
TACGGCTCACGTGTTTTACGTCTGTTCCGTAAGAACCTTACGGAAGCCGA
GTACAAAGCCGGGAAGAACGTCACTTTCCGAGAATTCGCCGATTATGTTA
TCCGAGTTCATACGAAACGAGAATTTGTAAACGAGCATTGGGACACGATG
CATAATTTATGCCACCCTTGTCGTGTGAAGTATGATTATATTGGCTCAAT
GGACTCACTTATCGAAGACTCGGAGACGGTTCTAAAAGAGATTGGTTGGT
ATAATCgagtcaaatttcccgccaAAGCAACGGATAAATACAAGAATAAA
TTACCCACTTTGATGAAGCAATATTTTTCACAATTACCGAGAAATGTGAC
AATGAAGCTGTATAAAATTTATGAAGctgattttaaagcttttggaTACT
CGGCCGATGAATATCTGTAGGGATTAACAAATTATAGTTCAGTTTTTAAT
GCACATCTTAGATACTTTATTTTATTCCTTTAAGATATTTAGAGATTAGA
AATTTCGAAAGCATTACAAAGAATTTACTCCACACAGAAATGGATGGTTG
TAGTGATTGAGCCGATGATAACATGTATAACAGTTTATATCAGAACCTTT
GTGCAACTTTAAGCCTATTATAAATTTGCTTTTATATCTATTcaacatca
aaatctaagagtaAATGAgat
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00049392TCONS_00049392Clytia hemisphaericatranscript
TCONS_00049393TCONS_00049393Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00049392-proteinTCONS_00049392-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_156supercontigscaffold_156:38583..42103 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
52.83	50.58	13.06	7.53	3.51	1.85	6.51	6.83	3.9	4.19	6.01	4.14	8.4	8.59	5.4	7.21	11.74	11.95	11.65	10.9	9.73	8.55	53.81	43.73	8.72	8.06	8.76	6.73	21.02	26.35