XLOC_031372 (gene) - C. hemisphaerica

Overview
NameXLOC_031372
Unique NameXLOC_031372
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_159:31582..38158+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031372 ID=XLOC_031372|Name=XLOC_031372|organism=Clytia hemisphaerica|type=gene|length=6577bp|location=Sequence derived from alignment at scaffold_159:31582..38158+ (Clytia hemisphaerica)
ATCGAGAATGGAAAGTCTAGAAAGAGGTAAgtgatttgttttgattcgat TGCTGAGCAGCCGTGCCGGTGTGTtgctcttttttcttcttcagctTTTT TTCTTGGGTATAAAATAGACCTGTTAATCAAAGCTTTGCACCCTGAACCC CCTACCAGAGGTTAGTCCTGGACCCATTGGGGGGTACAGCACCTCCCCCT AAACCTCCTACCTACAAGCAGAACTTTTTTTGGTGTAGACCTCAGTTCAA ACAAATAACCGAAATAACAATTCAGCGTAGATTTTGCAatgatgctggag tttttaattattcaacattacATATATATTCTGATTAGCATGATATGATG CATGTTTGGGAGAATGcaacagtcttttgaataactaattactccagcag aatttttttaatgaaaatgtcttACAATTGATTTGTCTTTAACACATCTA TTACCTAGCGTGTATGTACAACCTAGGTACGAGATAATTTATCCCGTTTT ACGTTACTCAAGCCAAATTCTGTttactaccgtaagttggtctaatgttg acatccgtcttctaatttcgacatccttctttatagataggaataataag aaggtcaaaatcactgatagactaaagatttttcctctctaatcgcgcta atcaaagtcaatcagcgattccgaccttatcctcagtttctattgttcct atctctaaagaaaggtgtcaaaattagaagacagatgtcgacattagacc aacttacggtaaccTTAAAACAGACATCTTTGGTAATCTAGAAGGGCAAC TTTTACCTCTGCCAATGCCAAACAGGGTAGTGTCTCCTTGGTCAGTATAT CATGGCtctatcactttcaaagtggagccCTGGCCCATGGTTTCAATTCT TATTCATGTTAAATGTCAAAGAGCGTTCTCTGTTGTCAAGTACAAGAATC GACTGACATACTtacattttaatgaccagccaggtctttcatttgagggc tatgcatgttagactccactgatgcaagttacccaatctcacacGGTACT GAcactattttgttttgatgattcgtttttaacactgcaatgtttGAGTG CAAGCTCCACATTTTTTCCATAGGGGCACAGACCACAGTTTAAATATTAT TGTTAAAACGGGTGTCTTTATACTGTTCAGTAGGTATTGAAGTTATAAAC TTGTCCAATGGATAGCAACAGTGGTTAGAGTGCCAATTATACATTCATTG ATATAATACTTCCTCACAGCTACTTGCTTCAAATATACTCCGCCCTCCTA AAAAGAGGAGGCATTTTTCCAAAAGGGGCGTTTATtgagaaatttttctc aaaggAGAGGCATTTATCCAAgggtgtttaaaagaagggTTTACTCAAAG TTATGGCATGCCATGTAGGTGTGTTTTTAAAACAGGGTCTGGACGCTCTT GAGTGAAATAGTACAAATATTTGATTTAAATATTTAGAAATGGGTCAAAA TTAAATTATACAATACAATTAGTAACCTTCAAACTATCAAAGGCAGGTTT TAGGGGATAAAATGTTACATTTCATTTTGGAACGTTGCAATTTAGTAAAC TTTGCCTAGATAACCTTGAGATGTCTAtgttttccttcttttttgtATTA TGGAGATGTTTAAATTTGAATTGATATTGTAAGCTCCTGTATTCTAAACA CAGGATAAATGGTTTGAAAGTTTAAGAAGTTAGATtgtggcaagctattt tttaaGAGATCTTTCTTAAAGATGAGtcctttttgaattttacatCAAAA CTTCCTCCTGTACCactgtaaaatgaaaattaaacaaaatgtTAGATTAT CTTCCTAATAAATAttcgtaattttttttcttcagaaatggATTACAAAG TTGCTTCTTATTTGCTGTTATCCTGTAAGTAAAACTTTTccatttaatat ttttatattttttttacgaTAAAAACTTATCATGGTCAGAAAAGTCTCTA TCCTTATGGCAGGGTTCGAATTAACGTATCGCGTTTCACGATTCGCGATG CGTTTTTTGGAAATGTACgaagaaaaaattcagaaattcaacaaaatcgc GATACAACATATAAAGAATTTTACAGCATTTTGAGCCTCCAAGCAAATAC GATGGTTATTTGGCTTGTAAATTGGTCTTTAGAGTGGAGAATGCATCGTA TATTGATAAAAACGCATCGTGAAACCTAAAAAATCGTTAATCCGATCACT GTATGGGATCATTAATATGCCACATTAGAGCATAGAGCAAGTGATACTGC CAGCTTAGcagaaaatcctttaaatttaaatgaaataaacatCTTTACTT TATAAGCGACCATGTGGGAAGGcttttcttattcaaaattaTTGACCCAG AATGAGGCATCACAAAAGATGGTTATATAATTTATATCTGGTCTAttatt aattttgtatttttctataAAACCATAGGCATACTCATAAGTCATGTACA TTCCAATAACTTAACTAACACAATTAACACCACAAACGAAACACCAACTA ACCCTCCAACGTACACAATACCATTGATATTACAAAATACAACAAAGCTT ACACCTATTACTATTACTAACGAGAAAATAACAACCAAATCTATGACAAC TCCAATAACGACAACCAACAACACAACAACTaaaaccacaacaacaacag caacaacaactaCTACTACAACCCCCACAACGACTACAACTATGAGACCT TGTAGAAGTAATTCTTTTTATGAGCAGCCATAAAATAAAGGTCCCTCTAC TTTGGGGAATTTCTTTAACTAGTTTGGGAAGGATTTTGTGAAGCTTGGAT CTGTTTGATTTGTAAATTAGATCATCACCAAGAAGCCCCTTTAACCACAC TACGCCTTTCTTTGGGAGTCTATTTATTCTGGTTTTTAAGATTCAATTTG TTAAAACTTCTAGGAATGAAATTTATCAATCGAATACATCAAGCCAATCC GGAAGTCTTGACGTTGGTTGGATCCACTTTTGTCATCGATTGTAGCGTAG ACCACACTGGTGGTCCTGAACCATCTGTCTATTGGTATAAGGATGATATT CCTCTACAAGAAAATAGCTTTAGGTAATAAATCTTTAAACATAAGAGCTT CAACTCACAAGAACATTTTACAATGATATTACTGTTTTAATCAGTTAAAG TAATAGAACTTACAATTTCGAAAGTCTGTTTTAATAGCAGATGTGACCTT TTAAAGTTTTATATCTTTAATATCTCCTGGCCTCTTCAAGGATTGGCACA ATCGATTAATAATTCAAATTGTTGGGGTAACAAATTATATAACCACGCCC GTTACACTACATTATCGTTCCTTTCCTATTCCTTTACTATTTTCCTTTAG AACCTTTGACGAACATAGATTAAACAAGACATTCAGACTTCGTTTAGAGA ATGTGGATATTCCAGACAATGGCAAATATAAATGCACTGTCGATAATGTT TGCAGCAAGTCAATCACCAATACTGTTAGTATTATTGTTAGAGGTATGTC TGCCTTTTGAAGTATTTGTTTCTACAGAAATTTTGGTCTGGAAGTTCAGT TTGTTTTTCAAGTTAGTTTGACTTACATTATTTTATATATTGTATCACAT CAGCACAGCATATGTATGAAGAAATTAACCAACAACGATTTTTGAAATTG ACAACTTATTATTTGCGTTCGATAGTTTCAAAGAAAATCGAACTGTATTC CAGAACACAAATATCTGCTTATAGCGGTTTTTAAGGCTTCGTGTGGTTGC AATATTaagatttgttttcttttccttcCCTAGAACAAAGGAGTGATGTG CCGATAATCTCAACATTTGAACCAGTGAACGCTACAAGGCTCGTGGGTGA GGAGTTGCAATTGACTTGTGGCGCTGATTTAGAAGATGGTAATATTGTTT TTTGTATTatgttcaaaaattgaaatatttcagtATGTTAGACAACTAAA ATTTAAGAGAAAGTTGTCTAtggtgaaaaaaattgaatgtcaTTATTATT ATCCTCTTAACAACCCTTAGAGGCGTAGTCGGTTTTTGATGGGTACTGGT AATTCCGTTTTCAAAGAATGATGAAGTCAAGTAAGGATGAAAGATTTCAA GCTAATTAAGAAAATGttatgaataaatattttattaaagAATTCATTAC TACCaattcacaggaaaaaattttcgatttccaaggttggaaatttcaag ttttcttagttggaaaaaagataaaatccaatggaaaatccaNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgtaatcgctcaaa tttccaaccttcaattataaaaccaaaatttccaacccaaaaatattgaa tttccaaccttggaaatcgaaatttttttcctgtgattaCTGCGAAGAAG CTTAAAAGAACATCGTGTCAACGCCTGGAATCCTCtacaatattgaaaaa ataagactGGAACATCTTTTCATTTCCACAGGAGAGTTTACACCGTTTAT TAAATGGGTCCGTAAAACGAGTGAGAACGTGACATCCCATCTTAACCACA CCTATAACAACACAACCTCTACAACCACCACCACAACGCAACCACCTTTT GGTATCATTCAAAAGAAATCAGACAAAATTCAGAATGTCCAAAATGTCCC AAAGATGAATACTGTATCTTATATAGAAGATGGTATGTTCTTTGTTTTCG TATTCGCTCTTACGTAACCTTAGGAGTAGTTGAATATCCGACTAATAATT CAacaaagtgctctataccatATTGGTAGAGCAGTATACCATACCAGTCA AGAATAGAGTTTCATACCTtttcaggcagtcttcagtcagaATCAAAGGT TGGCTGATATAACCTTAgtagtaaataaaaaaagatcaaaaaatatttag cgGCCATTTTCTTTTTAGATGTCCGATACACAGTAACAGATCTGAAGTTT GAACGCACTGCATCAAGTACGTTATCGTTAGAGGATCTTAAAGAAGAAGA TAGTGGTGTCTACACGTGTGTCATGTCCAATCTAAAAGGTGTTGTGCGGA AATCATCTCATGTCACCATTAACCCTAGTAAGTACGCGTTCTTACAGATT GAAGAGCTATTTCTAATGTAAGTTTTCAAGGGGAAAATAAGAATTCACTA TCCTAGGATGGCGGAAGAGGGCAACGTTACGGTTTATGCATTTGCTAAAT TCCTAAACTTCCCCTTTTTGacttatacatgtttttttcataagcataac GTGTATAAGCATACCAAGAcctgaatttgtctaaaaaataagcatattac aagcataTTTCTGAGCTTGCTTTTGAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00049421TCONS_00049421Clytia hemisphaericatranscript
TCONS_00049422TCONS_00049422Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00049422-proteinTCONS_00049422-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_159supercontigscaffold_159:31582..38158 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
18.34 20.06 6.62 4.85 15.05 12.39 13.03 12.23 12.5 13.97 11.46 10.83 9.88 8.2 10.94 13.08 16.03 18.43 10.17 14.26 11.1 11.52 15.61 14.13 7.7 9.1 17.02 14.01 7.98 8.73