XLOC_031375 (gene) - C. hemisphaerica

Overview
NameXLOC_031375
Unique NameXLOC_031375
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_159:66892..76530+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031375 ID=XLOC_031375|Name=XLOC_031375|organism=Clytia hemisphaerica|type=gene|length=9639bp|location=Sequence derived from alignment at scaffold_159:66892..76530+ (Clytia hemisphaerica)
AAATCCATGCTGTGTGCACGTGCTTTTTCTGGTACTGCCCATAAGATGTA TATGGCATGAAAATCCAAAGTTTTACATACCTCTTGTACAGTTTTTAAGA GTGACTATTAATTTAACATCCTCCAAGGATAAGGGTCAACATAAATatac cttttgctaatcaggatgTCATTTTGAACaagtaaaaactccagcattcA GGCATTAACTGTACTTACTTTACTTTTGACGAAGCATCACATCTCAAAAT GCTGAGACTTCACCCATATTTGATTAACTTGTCTTTTCCATTCTACTCTG TCATTTGCGATCATGTTTAAGGTGTTTAAGGTCTATTCCAGTGTCCTCTT TAATCTCGTCGTCCTTCCATCTGTCGTCCATCGCTTTGGTGGCCTCCCTG CCTCTCGCCTCAGCCTTGCTTCCTCTTCTTTGTGAAATCATTTTGGAGAG CTCTTTCGCTCTTTCAACAAGGCTGTTGTCATCAATTTGACCATACCACG AAAGTCTGCTgacgctgtggtatagtggtcattgatcttggttgctgcac aggcaaCTGAGATTCGATTCCCACTTGCATTGCAGCAgctcacttggcaa gtgaatgaacttTCACCTGGGTCAACCcttaggtggccgcatctttttTG ATTAGcttagcttttttattttgttgattccGCCTCTTGTATCATTTTCA GATGTGTTAAAaaggtaaataaatacttacttacttacacccatgccatg tgaggggaattgggtagttagttcaaggtgctgacagggCGCTAATTaaa aagcatctatagttgcgaaaatgggcctcaaagcctcctgcaactcaacc aaatagaaatagaagtctttgttttttcacaaagttttgTATGTGTATGG TTTTGTCCAGGACTCTAACCCCAAGCAAATTTTGGAGACAGTTGTTTTCA AATACTAAGTCTGTTGGAGTCTTTCTTAGTGAGTGTCCATGTAGAACAAA CGTATGTAGCTATGGGGTAAATAAGGGCATGAAGAAGTTTCGTTTTAAGT TCCATAGCTAAGTTTCTGTTTGACGTTCTTGTATAAATTCCCGAAGGCTG TGTTGTGTGTACATGCTAATGCAAGTCGTTTCTCGATACCTTTGGAAGTT CCCGGAATAACTATGATCCCAGGAAAGTAAATTACTCAACTTTTTCGACC AGCTTGCCATCAATCCagatttgtttttcattttctggggAGAGGATTTT ACATTTGTCACCATTAATTTTGAGTCCATATTTTGCACATGCTGATTCCA GTTGGTTGGTAGCAAGTTTAAGAGGAAGAAAAGTTACGGTTATTAGGGTT GTATTGTCTGCATATCTAACATTGTAGCATAATTCGTCATCAAACATAAT ATTTCTTGAAGATTAAACCACTCAGTAAGCCAATTGTTAATAATAACTGA ACAAGTCTTATTGTCGTACATGGTTTTGACGGTGTTGACAATATTGTTTG AGACACCAATTATACGCCGACGACTTAGAACTTGCATTCAAAAGTATTTC AGACTTAGAAAAAGGACTGAAAATCCTTAATGAAACATTTGTTCGTGTTC ACCTCCAAATATACGCcaagaaaaccaaaaaatgaTAATAAATCTCAAGT CTCAAAACCAAGATGAGTATCCTCAATCTATCGTCACGCTTAATGATAAA GTTATTGAAAATGTTGAAGTGTTCAGATATCTTGAAGACGACATACACTT CAATCAACCTTCAACAGGAGATGCAGAGATTGACTTAAGAATAGCTGTTG CTCAAAACAAGTACAACCAAATGAGTAAAAAACTGCACAATCGAAAGATC TTCCTGAAAACAAGGGTATATCTCCTAAATACAATGGTGCGCAGTCAGCT GACATATTCCTGTCAAACGCGGAATAtcactcaacaacaacaacaacgaa tTCTATCCACCTACAACGAATTCGATCCACCTACATTAATATGCTTTGTA GGATGGTGAGAGGCGGCTTTGAAAGAAGAATTGATGAAAACACTGAGCAA ACTTTCCACTTCGTCATGTCAAGTGAAGATGTTTTATGCGTCTGTAAGAC TGAAGACATCCTTCAATACGTCAAACGACAGCAACAAAACTATCTTGGCC ATATTGCAAGACAAAAGAACACCAGCATCGTCAAAAGACTGCTTTTCAAC GACAACGCTAACAAGAAGACCAATCAAAACACTCGAAGATCACGTGCTTG ATGGTCGGTCGCAGCAGACGAATTCTACAAGGAGgtcttaaagaaaaaga aaaagaaggataTGGTTGGCCTTCGCCCTAACCACTCAATGTTGGCACCT GAGAACACGAGCTAAAGAAGAAGTAAGTAAGTAATGGCAAACAACATCTT CCAGTGTCGAACGCActtttaaaatcaatgaaattgaaGTGTAGATTGAC ACCACACTCTTTTGCCTTCTATGTAATTTGCCTGACGATAAAAATTGCGT CTACTGTACCAAATTGGGTCTTACTGGTGGAAGTTTCGGTTCTTTCTCTT ATTTTTTCAAGGAGGATACGGTTTAACACTTCCTGGTATTGACAGTAATA AAATTGTAAGGTAGTTTTCAGGGTTACTTGTATCGCCTTTCTTGTAGATT GGTGTCACCGTCGTTTTGGAGCATTCTGAAGGGACCTCGTTAGTAGATAG GACTTTATTGAAAAGCTTGTGGAGGACATTGAATGTTTGTCATTGTTCAT CGCCTTCTTCTGATGCACCATTGTGTCCGGGggcctttttaaatttcata tgCTTGATTGCTTTTACAACATCTTTCTTCTCTATCTAATTGCTCATTAT TCAGAGCTGGGATGTCTTATTATTTAAAATGTCCGCCTCTCTTGGGAAGG CTTTGTTCAAGTGttttttgtaatgttttttcCAAATGGTTAGAATTTCA GAATTGTTGACTAGTTTTGTTACCTGTTACATCTTTCAGGGCCATCACAg gttttttttggttttgcttcaagctctttgatattttttaaataattcat GAGTATCTTGTTTTCTCGAAAGTTATTTTCAATGAGTATTGTCTTCTTTT CTAGTGCTTTTATTTTCGCTTGTTTCACCGCTTTTTTTACTGCGATATTA AGAATATTGTAATCTGATCGTATTTTGTCATTTGTAGAGTTCGGAAGCAT TCTTGTTCGAGCACGTCGTCTCTCCTCACAAAGATTTATTGTTTCTTCAT CTAGACCATTGATGGGCTTTCTCAATCGTTTTCCAACTGTTTCTTCAGTA TATATGTTCATTCATAATTTTCGTAAACTTGTTGTATTAGGTCTTCCAAG GACATTTCATTAGAGTTATCTATTAGTGCGCTGAAAGCTcctcttatttt tatttcaaaactcttTCTGATATTGTTGTCTTTAAATCTGTTGACGGCGA ATCTTTTAGAAACTTTGGCaaatgttttcgttttttatgGGAAAGTTTAT ATTGCATCAATAGTAAGAAGTCGTCCCTATCAATATTAAACGAGTTAAAG ACTTTTTTTGACAAAACATTTTTGATTATCTGGAGTGATTAAGGAAATCC AGCTGACTTTGGGTTTGTCCATGTTATTAATCTGTGTAGTGGTTGTTTAT ATTATAAAAGTCTTAATAAGGGAAAATTCGTTTATTGTACAAAACTGTAG AAGACAGGTACCGTTGTCACTCAGATTACCAACGCAGAAACGACCAACAA TGTTGGGCCATACATTATACGATTCAGGGCCAACCTTAGCATTAAATCTT CAAGTATGATTAATTTGCTGTTACGTGGCAAATTGTTGATATGACCTTGG AGTAATTCGTAAAACGCATCTGACGGGTGCATACGTTTGATCTGGTTTGA TAAATAAATAAGGGGTCCGTATTTATTTCGATTTGAACCATCATTAGTCT CTGCAATATCAACTTATAGCCTTCGAGATTTTCGGCCAAAGATCGGTGCA AAATTGTTGCTACTTCTTGTCGATGGATCCCTTCTTTTCGTTCCAATTGG ATGTTAATAAAATTGCCTATTTCGAAAGATTCTGGCATCTGTTGCGCCCA GTGGGTTTCCGAAATGCCGAGAATATCGATATTTAAACGAGTCATTTCTT TtagtaaaagttttctttttgcgaaaatcaattttttctgtGTGTGGCTT ATGTATATCAGGAAAAGAAAAGAGATACTTTATGACCATTTTTTATAGTT TTTCATTGCATAAATGCTTTGGAAATCTCTTgtgtacatttttatttcag tATTGAAAAGCCAAACAAAACTTGTTATTaaaataaagttgtaaaatgaT CAATCGTATTAGTGGATTTATTGACAAACATTTGCAGCTCATCAGGGtac aaatattttcaattttcacgttTACCTAATTCCTGATGGACCTAGATGGA CTTCAATGGTAATTCTATGACTGATATAGGTTAAAATCATACCGAAGTGG GCAATGAATTTAAATAATCTCAATCTAAGTTCTGTTTGAATTACATACTG TTtagatatttcatatttttcgaTTTCTGTTGTTTCTGTACAAGATTGTT TTCAGTCTCGTATTGTATAATCATTTGTACTTTGTAACAGAGAATGTTCT GTATAATGTCTCTATCATATATTCTTTGTAGGGAATGACAGTAGCGACGG GATGCATAGGAATCATACTGATAACTCGAAGGTACCATTTGGTATGtacc aaaattttgattgttttaccATTTCATACCTAAAAAGCAGAATGCTTTTC CTATTAATATCATGATCACGTTATTTCCATTGCACTTTTATTTCACCATT ATTTGTTTATTCACTTGATTCAGATGAAAAGATACAGACATGTTTCTGAA ATACCCAAAGAATTCATCACCAAGAAGGTATTTTTACGCGGAAAGTTGGA GAGAATTGAAGTCTGTGGAACATTATTGATTCAGCACTCCCCTATTCTCT CATTTGGCTTTTCCAAAGGTTTGACAATTTCATTCTTCATAGTGCGGACA GGGGCctgatccccccttcttaaatgatcccgtcccttcttggcatcccc caacctttaaaaataccTNAAGGGGCctgacccccccccttcttaaatga tcccgtcccttcttggcatccccccaaggacaaaaatagctaacaaatat atgtgaaatCTCTTTAGATAGTAAAAGCGAAATAATAcacttcttctttt tgactcagactactctaacagaaaacttcctttcattgagaccaaatttc ataacagtgcttgaaaataatctacaatatatatgtaagcccccttCTTA AACTGTCCCCTtccctttttcatgaaaattccTGACCCCCCCCTTCTTTA TTTTTTCGGAAGGTGTCATCTCCCCCctccccttaagaaagggggggggg atgaAACAAACTATGATTCTTTCGAATtttcatagcgtcagcctgagttt aggtcccaggcaaaaataaGGGCCCCCTGAAatttaagtccccccaaaga tttatgaattttttgttagcccccaggacttttgaccctagacacttcca aaaaattgatccagtaaaaaagggttttccaatgtaaatGGAGTTCAGTT GTAAgttttttaagataaaatattttgcacactttttcaaaaatttttca gattcatgagcttcaatttgggtatttgaagccaactattaagctgaatt attttagcccccgcgttaagtgatgagattttagctccccccaattACAC AGGtcccccaaaaaagtggtgtacttccagccccctccttttttggggaa aaatgtagggtgtaacccccccccAACTAGCAAGGGGGGATGACGCTATG ATTTTGCTATGATATTTTGTAGTATTTTACATTAGGAGAAGTATTCCGAA CGAAATTGAAGTTGGATTAAcagtttttctctttatttgGATTGTTTAGG AAGTCCTTCATTGCGTTTTTCGTTAGCTGGTGTTGAACTGCAAAATGGGT GGTACGAACATTTACAGGAGCTCCAACACAAAAATATCCTTTTCcaaatt ttgcagaaaaatgATAAAGAGCTGAAAGgagttttattttataaaagagT AAGTGAATAAATAAAGGTTGTTTAGGGAGACCCTGCCATGTCaaataaat atttaatttctgcGACTTTTGCTAGAAATTCTTTTTAtttcgattaaaaa aaacccAGGGACTAAAATAGCTAAAACCCTTTATCGTTTAGCTcattttt ttaagattcaaTCATTTATTCacaatttttgacttttaaatccAGTTGGA ATTGTTTAGTCTGGAAAACTGCCTTAGGTTTCTTCTTATTCAATGAAATT ATTCGATAGCAGACCCTTTGACCCTTTTTCTCACATTTCGCCAATTGGTG TCCTAAAATATCCTATATTatatttcgaaaattgaaaataaacggATCTA CATGAAGGAAATGCCATGAAGGCTACGTGAGGACATTTGAGTGAAGACTA AAAAAAGCCCCTAAGTATCACAGATGTATTTTATTGTTATGtttaatacc ttaagggaaataATTATGGTTAACTTTTCGAAATTAAAGTTCTCGCAAAA ATTAACTTTATTTGTAATATTGGAAATTTAAAGTTATTCGctcaaattct ttttcaacaatTCCTGCCcctcgctaaaattagttcttCCCGAGCAAAAT GACTAAACTTCaaactgaaactttttttgacttCAGGGTTGGCTATCGAA AGAAATGAATGTGAATGAAGATTTGGTTGGAAGAGGGCTCGCAATAACAC GATGTAACATTCCTTCACCACTAAATGTGTTCTTATACCAAGAGTTGATG GAGAGGTTACTCAAAGTCGAACTTCAAGCCGATAAGAAGGGAATCGGGAT CTGGAGACGAGAAAGGGAGGAGACTTTCATTAAAAGATTGATTGGTTGGG TGAAAAGAAAGTTGCAAAAATGAGGAGGTAAATGTTCAATTCTTTTGATA ATTGTCTTGACGGtgcttcttcttttgtttttctaatcATGCTCAATGTG ATAACAAGAAGTATATTGTTCGACTTGAAGTTGTTTGCTATTTTATATGT GGGAAGTTGAGTTAGGCTACTGCTATCCCCGAAATTCTTTCAAACATCAT TTTACGTATATATGTTAGACTTAGTGCTTTAAACccctttcatttttcaa agaaatttcctTAGTGTTTTTACACTTTCACAGCTCAACAAAAAAGGATA ACTATTTCTAGACATCATTCAGCATGCTTCAATGAATAGCGAGCTTCTGT GAATTGAATGAAGCTTTTCATTCTCTTTCAATAGACGCATCTATTTTTGA CTTTGCTTTGCTCATGCGCactgaaaaataattcaaaggaTCAGCTAGAA GTATCTCGTGAGCAACATTATTTGCTTTTTTGCATGCGTGAAAATTTTGC AATTGACTTGTGAGGAGGTTTTCCGAAAGCGTTTAAAAGGACTTTGATGG TGGtgaaagaagaactttaaatccttctcaaagaAAACAAACTTCTTAAA GTTTGAAGAGGTCCTTTTAATTATTTCAATATTTCCATTGAGCTGTTGTT TTTAGATCTTCTTTTTGTACTAGTTTCACTTTTATTGAGCTCTTTATTGA ATAGGTTGATAAGGCTTTTTATGGGAAAATCTTTGCCCTCTTGCTGATCT TTAAAAATCTGTAAGGTTATTGCAATGTTTAATGAAAGAAAAGGATTCTT TTTCACTTtgctttgttttgttgtttcttcgCGGCGAAAGGATAAAACgg attttcctttttctttcacttttgttgAGATGATgggaaaatatcatttt cattgCAATTTAATTTTATCACCTTCTTGCTCaacttttattaatttcaa ataaagaatttgtttaaaaataatcttttcaaaataaacGGCTCGTGTCA AAAAGACGGGggttaacttttatcaaattaaatCGAATCCATTCCGACCG CTGACAAACTACCTCTCAAACAAAAGCTATATCAAAAGAATATTTGAGTt ggaaattaaattttcatcaatttgaGTCTCGGAAAATTCGTTGGGATCGT GGCAAAATGTCCCCCCTGTATTAGTGTAAAGTTAGTTCCCTGTGAAGTAA TGAAATTAGTATCGAACCTTCTTCTTCCTCCCTAGCTCTATAAATATCAA ACCAAGATTTGTTGGGTCCATCATTGCGAAAGATTTAAAAGTGAAAGAAG GACGTATTTCATTCCTGTCTGCATCCAGATGCAATTACTGCAAACCAACA CCCACTCTCAACAACATCATCAACAACACTTTCCTCAACAACAAATGATG GACAACAATCTCGTCATCAACAGCGAACACCAAATGCTTATCGGTAAcga gtttttccaaaaatattctccCATGGCAACCTACACAAACAATAACATTC AACTACAACCCAGAATGCATCATTTACCGCTTCAACATCAACCCATACAT CCGCGACCGCGAAGGCGCCGCTCCAACCACAGCTTAGTTGCCACCATGGA TCCTGAAGCGGTCGCTCGTCGAAATGAACGCGAACGGAACCGCGTAAAAC AAGTGAACGATGGATTTGATGCTTTGCGTAAGAAAGTTCCCTTTTTGCCC AATAAAAAGAAACTCTCAAAAGTGGACATTCTCCGATGTGCCATGATGTA TATTCGTGATTTGAAAGGCGTGGTCGAAGAGTACGACCATAATAACACGC ACTATCTTACACATGCTCTCGGTATTAAAACCAGACCAAACGGGAGTTTT AGTAGTTCAAGTAGCTCATCTAGTGACGATTTGATTCTTTTGGAACAGGA CTTGGAAGATGATTTACTGGGGCACTGATCCCAtattcatttgaaaatta gttttttctatttttgtcgGCTTTAAGCCCAATCTATTTTCACGTGCTGA ACGATGTTTAGTttgtattaaaaagaaattgtaaaTATGGAGCtgtatat atattttatttatagaattcaaaataaacaaagaataCGCAATGAATANC CATGGATCCTGAAGCGGTCGCGCGTCGAAATGAACGCGAACGGAACCGCG TAAAACAAGTGAACGATGGATTTGATGCTTTGCGTAAGAAAGTTCCCTTT TTGCCCAATAAAAAGAAACTCTCAAAAGTGGACATTCTCCGATGTGCCAT GATGTATATTCGTGATTTGAAAGGCGTGGTCGAAGAGTACGACCATAATA ACACGCACTATCTTACACATGCTCTCGGTATTAAAACCAGACCAAACGGG AGTTTTAGTAGTTCAAGTAGCTCATCTAGTGACGATTTGATTCTTTTGGA ACAGGACTTGGAAGATGATTTACTGGGGCACTGATCCCAtattcatttga aaattagttttttctatttttgtcgGCTTTAAGCCCAATCTATTTTCACG TGCTGAACGATGTTTAGTttgtattaaaaagaaattgtaaaTATGGAGCt gtatatatattttatttatagaattcaaaataaacaaagaataCGCAATG AATATTCTTTCGTCCTCACTTCAAAAGGGCACATCTTAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00049426TCONS_00049426Clytia hemisphaericatranscript
TCONS_00049427TCONS_00049427Clytia hemisphaericatranscript
TCONS_00049428TCONS_00049428Clytia hemisphaericatranscript
TCONS_00049429TCONS_00049429Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00049426-proteinTCONS_00049426-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_159supercontigscaffold_159:66892..76530 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
C3orf33PREDICTED: protein C3orf33 isoform X2 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.08 4.29 3.02 2.33 5.47 3.75 6.76 6.78 5.75 5.91 7.24 4.56 10.92 8.11 5.95 7.47 10.18 11.44 17.95 20.66 9.99 9.8 9.37 8.87 8.27 10.22 5.73 5.39 6.37 6.71