XLOC_031379 (gene) - C. hemisphaerica

Overview
NameXLOC_031379
Unique NameXLOC_031379
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_159:57391..66798-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031379 ID=XLOC_031379|Name=XLOC_031379|organism=Clytia hemisphaerica|type=gene|length=9408bp|location=Sequence derived from alignment at scaffold_159:57391..66798- (Clytia hemisphaerica)
TTTTCGGACAGACTGAAGATAGAAACCGGTTATCCCTTTTACCTATTAAA AGATGTGTGTTTTTCTCAGTGATTTTTCATTTTAATGAGCGCGCGCGGCG AAATTTTTTGTCAGCGTGTCCATTTACCTCTCGCCTCGCAACCACCATTT TCAATTTTCAAGCCAGCCAAACCTTGACATTTTAAAGCAGAAAATCATTG AGAAAGGTAAGCTTTAAAACTTCTGTATAACAACATCAAAATATTTGTTT TCGATATTAGTTATGCATTCCTTTTTTTACAATCTCCTCTCCCTTTTGTA GGGGGTCATCCTGCTGCGTTACAGCGAAAATATATTCAATTCAAATTCAA CTCATCATCATCCCTCATCTAATATATTGACGATATTGACATCCTTCTTT AGAGATATAGAGGAAGAATAGGAAAGTTGGGATCATTGATTGAAAAAGGA TTTTCCTCTCTGACCACTAAGCAAAGTTTCGACCTTTCTACCGACCGTTC CTTATTTTGTGCATAAGATTCCTTTCCTCCTGCACCAAAGATTACTCTTC TGCCATTTACTTTTCTACTGGAAAAAGACCAGACCTCTGGGTACCATAAA TCTAGATGAATACAACCACTTCATAATGATTTCAACCACTTCCTGATGAC TTCGACCAACGTCATACTTTCTTAACCGTATGGAAAGGATATGATTCGTC ATGTGACCTAATTCGGCAATTTGTCCTTCCCCCTCATGATAACACTTGCT TTTCTTATCCCGCCCTTTCTCGCTTCAGGCCGAATCCTCAGATCACGGTT CAAAACCACACATTTTCCCGTGCAAAAAAAGAAGCGCTTCAATGTTAGCG CAGCAAAAGATGGGAACCATGACGCAACTGCCAGCATCGCGCAATTGAAT CTCAATCGAACACAATCGAATATCAATCGAATATCAATTGAATCTGAAAA TTGCGGTAATATTCAATTGAGATTCAATTACATTCGACAATCAAATTTCA ATCGGTCGATTGCGTTCTATTTGGTTCGACTGGTTCAATCGTTGGTTCAG TTCGATTGAGATCGTCTGGGAATGGTACAAGAAAAAACAAGTATCTTTAT TCCTAGGGAAAATGGCAGTGTAGCTGGAACCTCGATATTCCAGGATTAGA AAAAGCTATACCTGTTATCTTTTTTCTTTAAAGAATCAACAAGCCATCAA CATCAATAAATTACACACATTTACTCAGAGAAACTTTTAAAATTATCTGC CATTATGACTTTCTTGAAGCCGTTCTGAAATGAACCAATCGGGTTATGAA TCGGAATTCCTATGGGAGTTCTTTTCCGAAAGTTGTAAAATAGCTAAGTC GGCAAAAAAACTTTTCCCGGGGGTTTGAGGGAAAAACAGAACTGCTGTCA TTTGTTTTTTATTTAACCATATATTTAAATTTGGGCTCNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNCGACATCGTTTATCATTTGGAATACCCCCGTATTTGGACCATTCTA TGGTGGGCGCAAAATAGGGCGGAAACTAAGTAGCACCCTCAGTGCAAGAT TGCCGCCTCATCTTTATTCGCCCGCGCGAGAATGCGAGCTAANNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAACTCTAATTT CGATCATCCTTTAAGATAAAGAGGTTGCGAGATTTGGGTTAGCGAGGCAA AAATCGCTAAAAAGCTGGTAAAATCGTAATCCTCAAAAATTGATGTTCCA GCCTCACTGAATGGGGGATAAAGGCCATTTTTAACCAATATTTTTGAAAC TGTTATATAAAAGATTGCGGATGGAATGCGTGTCTTTTCATTTCAATCAT GAGAATAAATATTCATGTTGGGTTTCACAAAAATTAGTTCCAATAAGGTA CGAAGGAATAAATTTCAAAATAATGGAGGAATTAGAGAAGAAAGTTACAG AGGAATAGAGTTGGAAGTAACAAAGAAAGTATTGAAGGAATAAAGTTTGA AATAAGGAAGAAATCAAAGAAGAAAGCTACAGAAGAATAAGTTAAAACCA ACCCAAATAATTTCAATAAAGTTATTGTTTTTTACGTAAATAAGTTTTGA AATATTGGATACTTGAGTTTTTTTCTTGAAAACTCACAAAAATTAATCTT ACGCAGTTTGTCCAGGTTTGTCTCCTGAAATCTCAAAAACCCGTAAGAAA TTGAATTAAAAATGTCAAAAAAGCATCATCTTGCAAGAATTAAATTATTT CTGAAAGAGTTTGTCTCGTGAAAATAAGTTCTCGCAAATATTGATCTCTT ATTAAGGTATTAGATTTTCACTTTTCAAATAGATGCGAGGGAAACAACAA CTACAACAACTATAATAAATAAAGTATGGTTTTTTATGTTAGCATAATAT TTAATTTAATTAAAAACTTTATTTTTAACTTATCAGATTTAACAAGATGT TGAGGACTTCTTTGGTTCGTGCTGGCATTGCCACTTCAAGGGCTCTCAAA TCTCAAGCACCATCAGGAGTTGTTGCCGCCAGATGGAGCAGCAGTAAGCC AAAAGAATCTGATGAAGCATTTGATGCAAGATGGGAAGCTTACTTTAACA GAGAAGATATTGATTCTTGGGAAGTCCGTAAAGGAATGAATGAATTATAT GGCTATGATCTTGTTCCCGAACCAAAAATTATCAGCTCCGCTTTAAAAGC ATGTAGAAGAATCGATGACTTTGCTATGTCTGTCCGTGTTTTTGAAATGG TCCGTGACAAAGCATGTGGTGATAAAGAAATCTACAATTATGTTCTCCAG CAATGTCGTGGAACCATTGATGAGCTTGGCTTGTCCACACCTGAGGAATT AGGAATTTAAATTTTCTTTTTGTAAATTATACATGTTGTAATTTTGAATC ATTTTAAACACCATGAACTTATTTTATCCTCTTTGGTGACAGTTGTTTTC TGATTTATGCATTGTTTGGACGTCTTTGTAGACAATATCTGCTCAGATGA GGTACAAAGTCAAAATCTTTATTTGTTTATCTTGTTAATAATAAGCTTAT AGGGAGTCCGGCGAGTTTAAAGTTAATTTCACTTGTACATTCTGAAGTAC AAACACATTTACTGTTTTAGCCTCCACTAGACCATATAGACAAGGCCAAA ATAAGTTCTCAGTAAATTAAAAAGTTGTGTGTATTTGCCAAAATAAGTTC TTATAAAATTCAATTGTTCTAACAATTTTTTTAGGTTTAGTATAATAATG ATGACCCATGATATTGTTCTTTTTTTCGTTTCGTTTCCAGCGAAAATACG ATTAAAAATCAAATAAAATGACAAATAAAGAAAGATACGATCTTTGGATC GGCAGTGAATTGGGACTTTTAAAAGGTAATGTATTCTTTTCTTAAGACTC CCTATCCTCCTTCTTAGTATTTAGCAGTATAATAGCGTCAACATATTATT GGAATGGAAGAAAGCAACCAAATCTTTTATTTTAGGGGTTGTGCTGAAGA AAGAGAGTTTCGTGAATTTCGGGGATATCACATCGCTTGATAAGACGCAG TGTATCACGTCAATGTGCTGGCAAAAACAGGATAAAAAACTGACTAATGT AAGTGTTAGTTTACAGGTTTTTCCAAAAATTGCATAAATGGAGATTACCC TTACCCTCGTGATTCTATTTTTTTTAACTAAGTTACAGTTTTTTAACTTT TAGCCTAAAAGTTATTCTCAGTTATTAATTTTTTTAAAGCAGTTAAAGAA TTTTTGTGAAATGACAATCTATGTTTCTAAGCTTTGCACGCACGGCTTCA GGCACGACGGAAGCTTTTTATATCTGGTACGGCGAATGAGGAAATTTAAG CGATTTTATAGCAATTTGACCGATGAAGAGGAAAACTTCGGGTATTTTTG TGAAAATCTGGTACGGCGGCCGCCGTACCTGCCGTACCCGTTACGTCGTG CCTGGGCTTAAATACTTCTTCTCTCAGCAAAATTTGCTACCAAATTGATA TTTTTTATCCATTAAAAGATTATTCTACATATTTAGGCAAACCAACCATA TAATAACCATGCTGGTCAAAAAATGGTTTTGTGTTATTGTTTTAGGTTAA TTCTTAAGCTAGGAGTACAGACTTTTACGATTTTTGCAAATTTTCGTGAA AACTTGGTGAAAATAATGTAAATTGTAAAATATAATCATACTGGAAAATT TTTGATGAGGCAAATCGGGAAAGTTTATATGCACAGGAAATTTTCTTTAA AAAATTGAAAATCTATAAAATGTTTAAACTGTGAAATTTCAAGTCAGTTC AAGCGTATTTTTAATTTTTTAACAGCTTCTTAAAGGTACTGAAATCGTTT TTGTCAGATTCAAGGAATACTAGTTATCCCTTTGAAGCCAATTTTCGTTT GAAATTTCTCACTTTCACCGAACGATGCTGGATAGTTTATGCTCGTGAAA AACATCCCTCCTCAAATTCGCAAAAGTAAATTTCGTAAATTTTGAAATTA TTCGAACTCGTGAAAGTTATGGTGAAAGTTTGTAGGCCTTAAGTATATCA GAAAGAGCTACCTTAAGGGAAGAAATTTTTTGCGGGAATTTAATTTCGCG GTTGGTCTAATTATTTTTTTCGCGGGAATTTAATTTTGCGGTTCATCAAT TTTCAAAAAATTTGCGGGAATTTAATTTCGCGGTTGCAAGATATTTTTGA CCAAAAACGTTATTAATTAAACAAAAAACCTGTTTTAAGGCTTGAAATAG TACGAATTTGGGGGAATGCGTGAAATAAACTAAATTTCGCGGGAATTTAA TTTCGCGGATTGCCGATTTTGTAAAATTTCGTGGGAACTTAATTTCACGG TTTTAGGCAAAATCCGCGAAAACCGCGAAATTTTGTTCCCGCGAAAATTT CTTCCCTTAAGGTATTAAAAAATTCCTGTCCTTTGACTCGTCAACCAACT TAAACCTGTTGAATTTCAGATTGTGTTTGGCTTGAAGAATGGCACAGTTA AAACATTTGATACTTCAACCTGTGAAATGGGAACCTCGTTGACGTGTAAC AAAGTGGCACCAGTGCGTGGTGTGGCTGCTTTGCCTGATGGAAGTATTGT CACTTGTCTGGAGAATGGAAATCTACAACGCTGGAAAAATGGCCAGTGTG ATGTAAGTGGAACTACAATCATGGTCGTTATGACACGAAAGGGGAATTCC CTGCAAAACTTAAAAACCACAAACGAAGTATAAAATGCTAAGAATCAGGG GAGGGGAGGCAGTAATAAAATAACAGACATCGTGAATTCAAGCGACAAGG TAATTAATATACCAAAACATCTCCAAAATACCAAAAAAGACAGAAAAATG TGTGGTATCTTGACAAAAAAATTAGTTTTTAATTAAATTGTTACTAAACC AGTGATTTTAATCATTTTTTCATTAAAGTTAGTTTCGTTGACGTAAAATT TACTCAGAAAAAAATCGTTCATCTTAAAAATCGTAAATATCTCGTAATCT AACCAAAAGCCCTCTTAATAAAAAGCAACTTATGACGTCACCAGGAAATA TGGCAGATTTTCGGCTGCTTGGACAGTTATAGATGGGTCTAATCGACGAA ATTTTAAAAGAAACAGCATATTTATAAGCTACTTAACTTTCATTTCAGAT AAAATAGCCGAAATGTATTTTTAAAGTTTTGTAGGAAGAGGTATACACGA TGGTCCAGTGTTGAACGTCGATCTCTAAACTCTTTTTCCTACAACAAGAC AACATCGTTAATCATTTTCTTCTCTTTGTTCAGCTGGAGAAATCGGTTGG AGACGACATCAAAGTCATGGTTCACAACAAAAACACTAATGATGTCATCG CCACAGGTGGTCAGGAAAATGACCTCAAATTATGGCAACTCAAATCTCTG GATAAACCTATCTTCACTGCGAAAAATGTAACATCATTCTTCAGTCTATC ATTTTATATCGTTTTTCTCTCATTCTACTCTGCGCATGACTTGAGTTATA AAAAATTCCCGTCAAATCTACATTATTTTATTCTTTTCTCAAAATCGTTC TATTTGAAGCCATATTGACCGTGCAAAAAGTGAGGTTTGAATGTCTATGA AAGAAATAGAGCTTGTAAAACATTGCAGTTTGTTAAACAAATCATCCAAA CAAACAGTGTGTGTTTCATTAAAGTTAGTTTCGTTGACGTAAAATTTACT CAGAAAAAAATCATTGATCTTAAAAATCGTAGAGTTGACCCAATTCGTCC TATTTCAACTCAAGCCTGAAAACAGGCTTTTCGCTATTTTGATAGTCTCT GACCAAACGATTGAATTTCAATTTGAATTCCCGTCAAAATTTTCTCCTGT ACTCTTAGGTGCCAAATAAACGGGGGGGTTCGAATAAACGGGGGGGTTGG AAAAATTTTGAAATTTCAATAGACGGGGGGGGGACCTAATTGCCGGGGGG GTTGGAAATTGTACTTATGAAAACCCCAAAATAAGGTAAATATAGGCTAA AATCAGGCTTTTTGGAGCAAAATAAGGGGACTTCTTTTAGCCAATTGAAA ATATTCTTTAAAATTAATAAACGGGGGGGGGACCTAATTGCCGGGGGGGT TGGAAAAATTTTGAAATTTCAATAGACGGGGGGGGGACCTAATTGCCGGG GGGGGTGGAAATTGTACTTATGAAAACCCCAAAATAAGGTAAATATAGGC GAAAATCAGGCTTTTTGGAGCAAAATAAGGGGACTTCTTTTAGCCAATTG AAAATATTCTTTAAAATTAATAAACGGGGGGGGTCCTAATAAGGTCCGGG GGGGTTGGAAAATTTTCGAAAAATTAACAAGCGGGGGGGACCGTTTATTT GGCACCTAAGAGTAAGGTGTTTTGATGATTATNAATTTGAATTCTCGTCA AAATTTCCTCCTTTAAGGTATTTTGATGATTATCGTTTATGAGTATCGTT TCAGGTAAAGAACGACTTTTTGAATCTGCGAGTTCCGATATGGATAACAG CAATCGACTTTTTCAACGAAGACAACAACCGTGTTGCAGTAGGTTCCGCA AACCACGTTGTTCGTGTCTATGATCGGAGGGAGAAACGTCGTCCTGTTTT CGAGACTGACTGGCACGAGCACCCCATCACTGCACTGACGCTCAAACCAA ACAACCACTCTATCTTCCTTGGTAACAGTGCAGGTCACATGTCAGAGTTG GACCTCAGGAGCGGTAAACAGTTAGGCGCCTTCAAAGGAAATGCAGGCAG CATTCGAAGTATCGTTTGTCATAAAACGCAACCTTATATCGGTGTTTGTG GCTTGGATCGCGTGTTCAAATTATATGATACTAACAGGAAGATTGTTAAA CAGGTGAGAAGTCAGTTTCAATGTAGTGAATTTTTTTATCTGAAAATGTT ATATATTTTTTTAAAGAAGAGAATTTCAAAATAGGTCCATTTCATTTGTA CATTTGATAAGTGGAGTAGCACGAAACTCTGAGTAGTGTACTTTTTTACT TTCTGTTGTGAAGAAAGATATCTTTTAATATTTCTTTCTCTAGATTTATA TGAAGTCCAATCTCAATTTCATTTTGATGCCCGACACTGAACTTCAGGTG AGTCTTAACTATTGAACATGGAGAATTTAAAAACTGAACATTCGTTGGAT ATTTTTTATACAATGCAAAACAGTATTAAAGATTTTGAGTTCTGGAAAAT TTTAAACTCTCCNCTTGTAAAACATTGCAGTTTGTTAAACAAATCATCCA AACAAACAGTGCGTGTTTCAAAGAGTTGGCCCAATTCGTCCTATTTCAAC TCAAGCCTGAAAACAGGCTTTTCGCTATTTTGATAGTCTCTTTGACCATA ATATTTAATTTCAATTTGAATTCTCGTCAAAATTTCCTCCTTTAAGGTAT TTTGATGATTATCGTTTATGAGTATCGTTTCAGGTAAAGAACGACTTTTT GAATCTGCGAGTTCCGATATGGATAACAGCAATCGACTTTTTCAACGAAG ACAACAACCGTGTTGCAGTAGGTTCCGCAAACCACGTTGTTCGTGTCTAT GATCGGAGGGAGAAACGTCGTCCTGTTTTCGAGACTGACTGGCACGAGCA CCCCATCACTGCACTGACGCTCAAACCAAACAACCACTCTATCTTCCTTG GTAACAGTGCAGGTCACATGTCAGAGTTGGACCTCAGGAGCGGTAAACAG TTAGGCGCCTTCAAAGGAAATGCAGGCAGCATTCGAAGTATCGTTTGTCA TAAAACGCAACCTTATATCGGTGTTTGTGGCTTGGATCGCGTGTTCAAAT TATATGATACTAACAGGAAGATTGTTAAACAGGTGAGAAGTCAGTTTCAA TGTAGTGAATTTTTTTATCTGAAAATGTTCTCGTTTTTAAAAGAAAAGAA TTTCAAAATAGGTTCATTTCATTTGTACATTTGACATGTGGAGTAGCGCG AAACTCTTGAGTAGTGTACTTTTTATTTTGTGATGAAAGATATCTTTTAA TATTTCTTTCTCTAGATTTATATGAAGTCCAATCTCAATTTCATTTTGAT GCCCGACACTGAACTTCAGGTTAGTCTTAACTATTGAACATGGAGAATTT CTCCAGAATAGCCTTAATTTAAAAAACTCAACATTCGTTGGATATTTTTT ATACAATGCAAAACAGTATTAAAGATTTTGAGTTCTGGAAAATTTTAAAC TCTCACCTATCTTTCAGTTGACGGAAGTAAGCGGAGAAAAACGTGAACGC GCGACCGAAGATGGAGAGGAAGCGGACGTTTGGCAAAACATGGAAACAGT TAACGATGAAAGCAAAAGTGAAAAACCTAAGAAAAAGAAAAAGAAATAAT TTTAAAAGGAAACATTTTTTACACTAAAATTATTGATTGGCTTTTGTCTA TCACTTTTATGAAACTTGATACCTTTAAATAGCGGTGGTGATTGGTAATT TGGTCACAAAAGAATATTTTAATTACTTTCCTCCGCCATAGTTTCAAATT AATTTTCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00049440TCONS_00049440Clytia hemisphaericatranscript
TCONS_00049439TCONS_00049439Clytia hemisphaericatranscript
TCONS_00049438TCONS_00049438Clytia hemisphaericatranscript
TCONS_00049437TCONS_00049437Clytia hemisphaericatranscript
TCONS_00049436TCONS_00049436Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00049436-proteinTCONS_00049436-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_159supercontigscaffold_159:57391..66798 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
WDR74PREDICTED: WD repeat-containing protein 74 isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
232.98 230.5 277.5 294.2 168.82 139.27 205.47 218.71 238.08 223.38 210.87 226.7 176.98 172.89 193.6 210.25 263.2 291.47 109.19 106.19 258.9 257.41 215.83 207.45 194.55 203.21 218.42 204.32 184.11 172.68