XLOC_031382 (gene) - C. hemisphaerica

Overview
NameXLOC_031382
Unique NameXLOC_031382
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_159:135402..145191-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031382 ID=XLOC_031382|Name=XLOC_031382|organism=Clytia hemisphaerica|type=gene|length=9790bp|location=Sequence derived from alignment at scaffold_159:135402..145191- (Clytia hemisphaerica)
AGCTGACCAGGAACAGACCCAATGGTATGCAGTACTCATTTTGTCTTGTG
CAAAACAAATACAAACAGAAGAAGATAATCTCCAAGTCTCCGAATGTTTA
CACTCACCCAAAATAAAGCTCAAAGAAATTATTGTACTTGATTGATATCA
CGGTGAGAAGTTGGAAAAGCCATGCTAAAAGACACGAAAATGGTGATGGA
AATACGCGTTAACAAAGATAAGTAACGCTTAATAAACGCTGGCTGATTTG
ATAAATATTGACAATCACTTCAAACAAAGAATTTCACACTCACAAAAAAT
CGCACAGAGAGAGCTTGGTTGGTTCAGGAACAGTTCCTTATTGACTTTCA
GCGTGGTTTGGAGGAGCAGAGAGAAAAAAAGAAAAGGTGAAAGGATTTTT
TTGCGAAGGGTTTGAGTCATGATAATAAAACGCGTTTGTTGAGTATTTTC
GTTTCAACAAGTGATATTATTTATTATTGTACCATGAGCAAGTTGTTCGG
GATTCAATGTAAGATGACTCTTTTGCAAAACATCAATCACTTCTCATGTC
ATACTACACTGTGTACTACAAAAAAGAAAGCAAGAAAAAAAAGTTTTGAA
AAATTGATGTGTTGTTGAATTGAAAAAGCTGGAAGTTTGAAACTCGAGAT
TTTTATTGGCAATTCAGTGGTTTCGAAGTTAATGATTCTAATTATTGTGT
AACACTTTCAACCTTGTTCCTTTCTTTCTTAGACATTAAAAGAATATTTG
GTCTTTGGTTTATGAACATTATTCCACCAAATGCTGAGTTTAGAATAAAG
TGATCGTGTTATTTGGATAGGAGTGGTGTATCTTTTTTTGGAGGATGTTT
TCCACACCCTTGCTGCTTATACTTTTTACACATCTTTGTGGTGTAAGTTT
CATCTACACTGTATTTCACTGTATATCATGTNGTTTTAGGCTGAAAGCTG
AAATACAGATATAGCTGACCAGGAACAGACCCAATGGTATGCAGTACTCA
TTTTGTCTTGTGCAAAACAAATACAAACAGAAGAAGATAATCTCCAAGTC
TCCGAATGTTTACACTCACCCAAAATAAAGCTCAAAGAAATTATTGTACT
TGATTGATATCACGGTGAGAAGTTGGAAAAGCCATGCTAAAAGACACGAA
AATGGTGATGGAAATACGCGTTAACAAAGATAAGTAACGCTTAATAAACG
CTGGCTGATTTGATAAATATTGACAATCACTTCAAACAAAGAATTTCACA
CTCACAAAAAATCGCACAGAGAGAGCTTGGTTGGTTCAGGAACAGTTCCT
TATTGACTTTCAGCGTGGTTTGGAGGAGCAGAGAGAAAAAAAGAAAATGT
GAAAGGATTTTTTTGCGAAGGGTTTGAGTCATGATAATAAAACGCGTTTG
TTGAGTATTTTCGTTTCAACAAGTGATATTATTTATTATTGTACCATGAG
CAAGTTGTTCGGGATTCAATGTAAGATGATTCTTTTGCAAAACATCAATC
ACTTCTCATGTCATACTACACTGTGTACTACAAAAAAGAAAGCAAGAAAA
AAAAGTTTTGAAAAATTGATGTGTTGTTGAATTGAAAAAGCTGGAAGTTT
GAAACTCGAGATTTTTATTGGCAATTCAGTGGTTTCGAAGTTGATGATTC
TAATTATTGTGTAAAACTTTCAACCTTGTTCCTTTCTTTCTTAGACATTA
AAAGAATATTTGGTCTTTGGTTTATGAACATTATCCCACCAAATGCTGAG
TTTAGAATAAAGTGATCGTGTTATTTGGATAGGAGTGGTGTATCTTTTTT
TGGGAGGATGTTTTCCACACCCTTGCTGCTTATACTTTTTACACATCTTT
GTGGTGTAAGTTTCATCTACACTGTATTTCACTGTATATCATGTCACTTA
TTATTAAGTAGTATGTTTGAACGTTAATTAGTACAAATAACCTAAAGTTT
AGGCAACACTTTGTTTCTAAACAATTCACTTTATTTTAGAAGGTGATTTC
AACGGCCAACGGCGACAAAGGTATGAGTCATTCCTAATACAAACTTTATA
CTATGCTGCTTTCTATGACGGAAGGGTTTTTGCGGTGATGAATATTTTGT
TCTTAAAACAAACAATAATGACACCCTTCATTTCATTTTTACAGAGTCAG
TTCATGTGCGCATAAAGCGGCAACAAGCGCCACAAAACTACCAACTTCCA
CCACACCTTCGACAGCCTCAACCAAACAATAGACAACATTTCAGACTTCC
AGCTTATCTGAGACAACCACAAACCAACCCTTATCTTAGACAACCTCGAC
CTGATCCACGATATGCACCCAACCGACCAAGACCAAATCCACGTTTTCCC
AATCCGCCGAGTCCTAATACTCGCTTCCCTCAAAATCAGCCTCGACCTGA
CCCAAGGTATCAGCCTCGCCCTGACCCAAGGTACCAGCCTCGTCCTAATC
CTCGTTATCCAAACCAGCCACGCCCTACTTCGAATAGGGGTCAACCACCA
CGTAGACCTGGACCATTTCGTCCGCCTCCTTTAAGAGATTTGCATGGTTA
CCAACAATCACCAACAAGACCTGGAGAAATCTCCATCAATTTCATCAACA
AATCTGGCAGGAGAATCAACGTAAGTTTAACAACAAAGTCTTCTTATTCA
CCATTCAAAACGTGACCGAGATGAGCACGTAATTCCCTTTCCACCTTCTT
TCATTACAGATGTTCCAGTCCCTGCCTTACGGTCACGAGACACGCTTCAC
TTTCACTTTACGACCGAACGAGCCGCGAAGGGTGAGCGTACAACCAGATA
ATTCTTTCTGGCAAGCATATGATATGACGACAAGCTTTCCTCTCTACATC
AATGGTCAGCCGAGCCTTGAAACATATCTTCTTCGACAAGGAACGAGTGT
AGATGCACGAATTACTTCACGTAAGAAGGCTCTCTCAGTGGAAACAATTC
AATATCTATTTAACAAGTAATTTGAAAAATATTTAGTGTACAGCAATTCT
TCTCAAATATCTAATTTTAACTTTAATTCCTTGCAGCCAACTTACGAGCA
GAGCCAGTGAAGCGCGATCGAAGTGTTCCACGCTTTATCGAAACACAGGT
GGTGGTGGACAAATCAATGCTGGACCACCATGGTGAACAGAAAGTCATGA
ATTACACCATCATGCTCATGAATTCGGTACGTTAGAGTGCAAAACCTTCT
TCAAAGTATAATGAAAATCTTAAGAAGGTGATTGTTACCATTTTTCATCT
TCATCTACAGGTGACGCGGACGTTTTTGCATCGATCGTTCGGAGCGCCCA
TCTACGTTTCTGTTGTCAACATTCACCTTATGAAGAACAAACCGGTCAGT
ACAACATATATTGTCTCAACACCACACACAGTACCAGACCCCTTCATTCA
CATTGTATTCTTCCCTTTCACATTTTCAGTCGTATTACCGTATCGTGACC
AATCGTCCGGAAATCAGCGTTCCCGGAGCATGTCGGTATTCAAGAGAAGT
TGCTCAACGTAACAACTCGGTGGATTTTCATCTCATCTTGACAAGGTATA
CATATTGCAGCATTTTCTCTAACCATTCATTATTTTACATCCCTACATCA
ATTTCTAATAATTGATCAAGGTATTTTCCTAAGATTTTCCAAACCTTCTC
TTCAATGGCAGATTTATATAAAAAGTTGTTTATTCCTTTTCCAAGCTCTA
TCTCTTGAACTGGAGCAAGAATCATCATTTTTAAAAGAGATTTATTTTAT
TTTCAGGGAGGATATTGGACCAGCAGGTAAGTTGATTTCTTGAAAAAATT
CTCCACCAGTGATTTGCTTATATAGATTTTGTACTGCTCAAAAACCTTCT
TCACTCAATTTTATCTTTCCAACACACACAGGGTTTGCAGCTATGTATAC
AATGTGTAGTCGCAGAAGTTGTGCATTAGTCAAGGAGAACGGACCCGACA
CTTCTTTCGTCATCACTCATGAACTTGCACACGCGTAAGTTATACAACAG
AGATAGGAGATCTTTATTTATTAGCTGTTACCCGTTATATTTTCTAACGT
TGACCATGTCTACAACACTGTGTTTTCACACCTTGGTAAAGTTTAAGCAA
CCGACACTAAGGTTTGCTGGCTGTTACTTATGATAATAGTTTCCCGATTA
CCCGATTACCGTAATCCGTTTTTGTGATTCAGTTTGGGTATCGATCATGA
CGAGGACGATGGTTGTGGAAGAGAGAATTTGTCCGGTGGAAATATTATGG
TCAAAAAGTTGTATGCTACCTCTTCCAATTTTCGATGGTCCAAATGTAGT
GCGAAAATGATTTGGCAAAATTTGAAGTAAGCAAATGTGTCAAAAGAGAA
CTAATTTTATTGATGAATATTGCTTTGAAAGAGGTAAATAGAATAAATAC
CGTAGATAACTAGATAAATAGCAATTTCTTTTTCCATTGTTTAGATACTT
CACGTGTTTAAAGAACAAACCAAAAATGCTTCCCACATTCAAAAAAAGCA
TGGATTGGCTACCAGGGGAGCTGATGGGAATTAAAGATCAATGTCGAAGC
TATCATGGTTCCTCCGCTCTTCCTTGCACACCCAGGGTTTGTTCCATCAT
TTTTGTTTTTCATGTATTCTATAACAGATATACTCTACTAGAATCGTAAG
TTGACATAATTCGATGTGAACTCATCATCGAAGGACGATTTGTAGTGTAC
TCTTTCACAATTTCAGAATCCATTGACGGCGTGCAGATATTTATGGTGTC
GACCCAATCAGAGTGCACCTTGTCAACCTGTATGGTGGCATGCTCCTTTG
GAAGGCTCAACGTGTGCCAAATCAAAGGTGAGATTTCTTTTGGAGTTTAT
GTGTCTTATTTAAAGCTTACAGACAAAGAGGTAATTAATCATAAAGTTTC
TCATAAAAACATGAATTTATCGAACAATTTGTGGCTAATTTGGCTAACCA
TCATCTCTTTTTGGACAGTGGTGCAAAAGAGGGCGTTGTGTGACCAAGAT
GAAGATCAAACCAGTTAACGGTGGGTGGTCCAAATATTCGGAATTCACAC
CACCCTGCAACCGAAAGTCCACCAGATGGATTGTTCAACATCGAAACAGA
AGTTGCACCAATCCCAAGTAAGACCCAAAATAAATCTCTTCGAAGCTTCC
ATTCCAAACCCAGCCTTGACAGTATATTCACAACTGACTATCATACTTTA
TTCTGATTCTCTTTAACAGGCCGAGGTTATCAGGGAAGAAATGTCAAGGT
AGTCCCAATCAATATCGTATTTTGATCCCAGGAAGGAATGGGATTTGCAA
GCCTTTCAACATGCGACAATTGGTAAGCAATCTTCAACAAGAGAAAGTAG
AAGGCACCATGATGGAAGAAACAAACTATTCTTCTCATCACCTTTTTATT
CTTCTGATTCAGCTCTTAAGCGGAGAAATCGATTGGGAAAACATACGACA
GAACGGGTGCAGTTATAAGAATGATAACGTCACTAAATGGAGAGTTTATC
GCGAAAGCGAGCAACGTAGACAAGGTAAGATCATTATGTTTTACGTTCTT
TCATTGGATTCGTCAATGTAAAACAACAATCTCCTTAAGAAAATGAAAGT
GAACAGGCCTTTGGTGCATCTCATCTATAATTTTTATTTTGCAGTAAAGT
CGTTAAATTTAACGTGCGATTTTGAAAGCCCTGGATGCGGATGGAAGAAT
TCAAAGAAGGGCGTCAAAGGGTGGAATATTGGCAAAGGAGCAACGCCCTC
ACACCGAACAGGTCCTTCCGTTGATAACACCATCAAGACCAAGACAGGGA
AATATCTTTACTTTGAGGCGTCATGGGTGTCAGGTACCACCCCTCTGAGG
AGAGGGTCACGTGTCATTTTGGAATCACCTATCATCTTCTCATCACAAGT
GTGTATGAAATTCGCTTATCACATGTATGGAAAGGGTGTTGGCTCGTTAG
AAATACACATTCGAAGGGGCAAGCATTCACGCAAAATGTGGAGTAAGAAA
GGCGATCAAGGTGATAAGTGGTATCAAGCTGAAGTTGAACTGGCTATCAA
CATCGAGTATAAGGTTGGTCACCAAACAATATAATAACTCACTTTAAGTC
CATTCATTCCATCAAAGGGTTGACTGTTGGGATTGTTACCATTATTCTGT
TTCTCAGTTATGTCGATCAGGATGGTCAGAACACTTGCTCCTTTCTTGAT
GATGAAAAGAAGGACTTACCGACCATGACCAATATATCTCTGTTTCTTAT
TAGATCACGATCGAAGCAGTGCGTGGTAATTCATATTACGGAGATATAGC
AATTGATGATATTCAATTTTCTTACGGGCTGTGTAATGCAAAGTCAAGTC
AAGGTAGGTATTCGAAGGGAAAAGTGGGTTTCTACGATGAAGTATTTTCT
CAAACAACGTCAGATAAAATAAGTCAAGAGCCTCTAGAGCTTAAATGGTC
TCCATTTTTGAAAAACCTTACCTGTCAGTGAACTTCCTTTTCTTCTTTTC
TTTCTCAGACGATAAACAGATCTGTACTAACGTGTGTATTACCCAAGATA
ATTCAAAGATGGTTCGAAGGAGACTTCCTGATGGCTATCCCTGTAAATTA
CCAAAATCGAAAAATAATGTTTGCTTTAGACAAGTTTGTCAGGTAAATAA
ACATTTTATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNAAGATCAAACCAGTTAACGGTGGGTGGTCCAAGTATTCGGAAT
TCACACCACCCTGCAACCGAAAGTCCACCAGATGGATTGTTCAACATCGA
AACAGAAGTTGCACCAATCCCAAGTAAGACCCAAAATAAATCTCTTCGAA
GCTTCCATTCCAAACCCAGCCTTGACAGTATATTCACAACTGACTATCAT
ACTTTATTCTGATTCTCTTTAACAGGCCGAGGTTATCAGGGAAGAAATGT
CAAGGTAGTCCCAATCAATATCGTATTTTGATCCCAGGAAGGAATGGGAT
TTGCAAGCCTTTCAACATGCGACAATTGGTAAGCAATCTTCAACAAGAGA
AAGTAGAAGGCACCATGATGGAAGAAACAAACTATTCTTCTCATCACCTT
TTTATTCTTCTGATTCAGCTCTTAAGCGGAGAAATCGATTGGGAAAACAT
ACGACAGAACGGGTGCAGTTATAAGAATGATAACGTCACTAAATGGAGAG
TTTATCGAGAAAGCGAGCAACGTAGACAAGGTAAGATCATTATGTTTTAC
GTTCTTTCATTGGATTCGTCAATGTAAAACATCAATCCCCTTAAGAAAAT
GAAAGTGAACAGGCCTTTGGTGCATCTCATCTATAATTTTTATTTTGCAG
TAAAGTCGTTGAATTTAACGTGCGATTTTGAAAGCCCTGGATGCGGATGG
AAGAATTCAAAGAAGGGCGTCAAAGGGTGGAATATTGGCAAAGGAGCAAC
GCCCTCACACCGAACAGGTCCTTCCGTTGATAACACCATCAAGACCAAGA
CAGGGAAATATCTTTACTTTGAGGCGTCATGGGTGTCAGGTACCACCCCT
CTGAGGAGAGGGTCACGTGTCATTTTGGAATCACCTATCATCTTCTCATC
ACAAGTGTGTATGAAATTCGCTTATCACATGTATGGAAAGGGTGTTGGCT
CGTTAGAAATACACATTCGAAGGGGCAAGCATTCACGCAAAATGTGGAGT
AAGAAAGGCGATCAAGGTGATAAGTGGTATCAAGCTGAAGTTGAACTGGC
TATCAACATCGAGTATAAGGTTGGTCACCAAACAATATAATAACTCACTT
TAAGTCCATTCATTCCATCAAAGGGTTGACTGTTGGGATTGTTACCATTA
TTCTGTTTCTCAGTTATGTCGATCAGGATGGTCAGAACACTTGCTCCTTT
CTTGATGATGAAAAGAAGGACTTACCGACCATGACCAATATATCTCTGTT
TCTTATTAGATCACGATCGAAGCAGTGCGTGGTAATTCATATTACGGAGA
TATAGCAATTGATGATATTCAATTTTCTTACGGGCTGTGTAATGCAAAGT
CAAGTCAAGGTAGGTATTCGAAGGGAAAAGTGGGTTTCTACGATGAAGTA
TTTTCTCAAACAACGTCAGATAAAATAAGTCAAGAGCCTCTAGAGCTTAA
ATGGTCTCCATTTTTGAAAAACCTTACCTGTCAGTGAACTTCCTTTTCTT
CTTTTCTTTCTCAGACGATAAACAGATCTGTACTAACGTGTGTATTACCC
AAGATAATTCAAAGATGGTTCGAAGGAGACTTCCTGATGGCTATCCCTGT
AAATTACCAAAATCGAAAAATAATGTTTGCTTTAGACAAGTTTGTCAGGT
AAATAAACATTTTATTNGAAATACACATTCGAAGGGGCAAGCATTCACGC
AAAATGTGGAGTAAGAAAGGCGATCAAGGTGATAAGTGGTATCAAGCTGA
AGTTGAACTGGCTATCAACATCGAGTATAAGGTTGGTCACCAAACAATAT
AATAACTCACTTTAAGTCCATTCATTCCATCAAAGGGTTGACTGTTGGGA
TTGTTACCATTATTCTGTTTCTCAGTTATGTCGATCAGGATGGTCAGAAT
ACTTGCTCCTTTCTTGATGATGAAAAGAAGGAATTACCGACCATGACCAA
TATATCTCAATATGTTTCTTATTAGATCACGATCGAAGCAGTGCGTGGTA
ATTCATATTACGGAGATATAGCAATTGATGATATTCAATTTTCTTACGGG
CTGTGTAATGCAAAGTCAAGTCAAGGTAGGTATTCGAAGGGAAAAGTGGG
TTTCTACGATGAAGTATTTTCTCAAACAACGTCAGATAAAATAAGTCAAG
AGCCTCTAGAGCTTAAATGGTCTCCATTTTTGAAAAACCTTACCTGTCAG
TGAACTTCCTTTTCTTCTTTTCTTTCTCAGACGATAAACAGATCTGTACT
AACGTGTGTATTACCCAAGATAATTCAAAGATGGTTCGAAGGAGACTTCC
TGATGGCTATCCCTGTAAATTACCAAAATCGAAAAATAATGTTTGCTTTA
GACAAGTTTGTCAGGTAAATAAACATTTTATTGCAAATGATCCAGATAAA
GGTATTGAACCGCATTGAATATCTTTAATCTTTATTCTCATTCACCAAAG
AATGAGAGATAATGACAATTTATCATTCTTAATTTTTCAGCCCGTTAACT
GTCATGGTGTTATAAATGGCCGAAAATGCTGACGTTACAAAAATGATTTT
TGAGAAAATTTAATGTATTTAATCAGTTTTATTTGTAAAACTTATATTTT
TATGAAAGAGAATAGAAAAAGTTTAGACCTGAATAGAACGCTGGAAATAT
AAATAATATACTGTACATCATTGACCACAAAATGATCAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00049465TCONS_00049465Clytia hemisphaericatranscript
TCONS_00049464TCONS_00049464Clytia hemisphaericatranscript
TCONS_00049463TCONS_00049463Clytia hemisphaericatranscript
TCONS_00049462TCONS_00049462Clytia hemisphaericatranscript
TCONS_00049461TCONS_00049461Clytia hemisphaericatranscript
TCONS_00049460TCONS_00049460Clytia hemisphaericatranscript
TCONS_00049459TCONS_00049459Clytia hemisphaericatranscript
TCONS_00049458TCONS_00049458Clytia hemisphaericatranscript
TCONS_00049457TCONS_00049457Clytia hemisphaericatranscript
TCONS_00049456TCONS_00049456Clytia hemisphaericatranscript
TCONS_00049455TCONS_00049455Clytia hemisphaericatranscript
TCONS_00049454TCONS_00049454Clytia hemisphaericatranscript
TCONS_00049453TCONS_00049453Clytia hemisphaericatranscript
TCONS_00049452TCONS_00049452Clytia hemisphaericatranscript
TCONS_00049451TCONS_00049451Clytia hemisphaericatranscript
TCONS_00049450TCONS_00049450Clytia hemisphaericatranscript
TCONS_00049449TCONS_00049449Clytia hemisphaericatranscript
TCONS_00049448TCONS_00049448Clytia hemisphaericatranscript
TCONS_00049447TCONS_00049447Clytia hemisphaericatranscript
TCONS_00049446TCONS_00049446Clytia hemisphaericatranscript
TCONS_00049445TCONS_00049445Clytia hemisphaericatranscript
TCONS_00049444TCONS_00049444Clytia hemisphaericatranscript
TCONS_00049443TCONS_00049443Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00049460-proteinTCONS_00049460-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_159supercontigscaffold_159:135402..145191 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.22	0.15	0.15	0.13	1.24	0.92	10.93	12.56	10.56	16.98	13.13	5.21	42.28	51.23	14.8	14.62	23.09	44.76	57.94	58.88	35.85	38.36	23.95	34.79	49.53	48.03	2.16	2.42	14.41	15.25