XLOC_031402 (gene) - C. hemisphaerica

Overview
NameXLOC_031402
Unique NameXLOC_031402
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_16:196067..200979-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031402 ID=XLOC_031402|Name=XLOC_031402|organism=Clytia hemisphaerica|type=gene|length=4913bp|location=Sequence derived from alignment at scaffold_16:196067..200979- (Clytia hemisphaerica)
ACAAAAAATGCTGAATCATCACCATGAGAATGCTGAATCAGCACTTCCAC CAACACAACCGGCACCACGTGTAAGACGGTGTAGTTACAGTCAAGTGGAT TTTATTGAGAGATATGACGCAGAACAACAACAACAGAGGAATGAGAAAAC CAGAGGTTTGATCGTACACGAAACTTTTTTGAAGGTAAAAGAATTTATTT CATCTTGTCTCGTGTATTACTCCCCAAACAAAAAGGTCCTTTTACTACGC GTAGATCCAGCTAATTTTTTAAAACATTCTGCTAAATTTTTCTCTTAACC TACTTATGGTCAAGTCTCAAATCTTGATTGTGGTAAAGTCTCAAAACCTA ATAAGAATTGGAAATTTAGGCTTCCCTATTCAGGCTGTCAGGAAATTGAA CGAATTTTCGTCATCTTCTTTTCTTAGCTGAAGGAGATGAACAATGAATT GGATCGACATTTGTTTTTGGACGACTATATTGCTTTCATGGTCAATACAG GTAAAAGTTTTAATTTTTTTTATTTCAGCTCCATTCATTCAAAGGCGGTC GAAGAGTCGAAGAGTAGATCCTAATCTTACATCTTTTTAAGCGTATCCAT TAGCTTACACAGCGTTTTCAATCAACAAAAAAATGGCTTTTCCCGCTTCC CTACCTAACCGCACGAGCACAAATTTTTTTCTTAATTCTACTTTGTCAGT ATGAGCTGTGCGGCTGCTTTTTATATAATAAAAAAATAAATTTTCTTTTT CAGGAGATACTGAAATCACACAGAAAATTCCGATTGTTGGAAAGAAATTA TTAGATCTGGTTGATCTATATCGATTGGTTCAAAAACATGGTGGCTTCGA AAAGGTATTGATTTTTTAAGAATTGATCAAAAACAGAAAGAAGATTGAAC AGGAAATCTGTTAAAATGAGTACTGCGCTAGTTGGCTTTAAAACTAATAG CACTCAATAGAAAATGTAACGCATTTCGTAATACTCTTAACTATCTCTAT GGTATTGTTGTGCCCAACCCTTGTCCCAGGTGTTGAATCTCTAAGCCAAG CCATTCCAATCCAATGGTAATAAATTGGACTCATTATTTACACTCATTTT TCTGTGATAATGAACACCTGCCCACTTAACTCTCTCACGATAATTTCATT CATCTCTCACTGCAATCCTCGAACTTTAACTCGAACAAGTTGTTTGGTTT CTCCAGTTAACCCTTATATAGCCAGTCCCCAGCCAGGCAAAGCTCGAAAC GAATTAACTTTCCCCGAGTACCTTCGACTTTTAAAAACTCCAATACTTAA TTTCGAATCTAAAAAAAGGAATTTCACACGAATTTGATATAAATTACAGC GGAGGCTCCATAATTCGAACACGCACGATGAACACAAAATTTGTTCGAGT TAAGGAAATTTCGAGTTATGAAGTAAGGTTTATAAGGCATTGTTAACTGA AGGGACCATAAAAATTTTCAAGTTAAGGAGGCATTCGATCTAAAGAGGTT GGAGTTAAAAATAGAGGTTAAAGAGATTCCATTGTACAAACACATTTAGA TCAAAGCAATATTCTTCGTTTTCAACACCCGTCTGATAATTCTTCTTATT TTTGACTCAACTTATTCAGGTTTGCCAGAAACGTCAATTAAGTGCTGTAG TCAGAGAATTGAACTTGCCAAAGACGATCACCAGTGCAGCTAATACATTA CGAAACCAGTGAGTATTTTGCCTTTTTTCAATGTTTCAACTTTTCTATAG GATTGCGACCATCAAGATAAATTATGAATGAATGAATAAATTATTGTATT ATTACACCGGAAGCTCACCNCGATAAATTGTGAATGAATGAATAAATTAT TGTATTATTACACCGGAACTGATGAGGCTCACCTTGCCGTGAGCCCACTT CGGTCCGTCGAACGGACACTATGTCTGTAATGATTTTTTACCTGCTCAAG AATATCTACAGCTGACAATTTTGCACATTCAAGAAAGTGACCATTTGCAT CTTAAGCCTAATAATGCACTTAGCTGGGTATAATTTGAATTTACAAGCTG TTAAATTATTGTCAAATATTGTGTCTCCAAAATTAGAATTAATGAGATGT AGTTGTCTTGGCTACACTTTACCCTTGTGTTATATTTTGGCATTTTAATA CTCTAGCAACATCTAATTTTAACTTTGATAGATTTTTGCAAATTAAGTGT TGGTCTGACGACGTTTTAAAAATATTATTAAAGTTATGCATTTCGAAGTA TTTACGTAAATTTTGTTAGAAGAATTTTCGGGATATCTCATAATCTCGCG TAAATAGTAGAATAATGGATTTCTAATTTTTTTGTAGTTATTGGGTTTGT CCACAGAAATTAATCGGGATGTTTTACTTTATTGTTTTTTTATTTTCAGA TTCGCACGATTTTTGTATCGTTTCGAATGTTATCAAAGAGGCGTCCGCGT CAACGAGCAATTTCTCCGTGAACAATTGGATAGTCCTAAACCAATCAAAG AACAGACTCCTCAAATCCGACCAATCAAACAAGAGGATTTTTATTACATG AACGAAAAACAGAAAACACGTGGTGTCGACGAAATGCATCCTGCTTTCCC ACAATACTATGCGCAACACCCCGAAAATCCTTTGCTTCGTTTATCATCAC AACCGTTGCCAAGAGATACAGTTGCTCAGCGATCGACCTCGATTTCACCA CCGGTTTTGAAACGGCCAAGAAGTACTGAGATTCAACGGAGGAAAAGTTA TGAAAACGAACTGGCTCAATTGGTAAGATGATGTTTTACTTTTTCTTCCG TCTTGTCTTTGGAGATAAGATTTCGCGTTATGGATTCTGCATTATTCCAG TTAAACTCGGGGGGGGGGGGGTNAGGGTTGCGAGCTGACGGGTATGTGCC GCCCGACTTTTGACCCTTGGACCCTTAGCGGGACTAAAAGAGAGTCTAAA TAAGTCTTAATTGGTTTTCTAGAAGGGGTGATATATTAAAACATCATCAT TACTCGAACCGAGTGACCTTGAGTCATCAACAAAAAATTGTTTTTGCTTA CCAAATCATTATAAACAAAGAAAATGATAAAAATAGCTCGGAAGGATGAA GGTCATTGGTACAATTTATGCTTCTGATAATTAAATGATCTTTATTTTCC ATACCCTGCCCACTATTCTAAATTTATTAATAATGGTTGTCCTAAATTAC TAGTCATATATTTTGCGCTAAAAAGATGTACGGTCAAAACGATTTTTATT TTGCTGACACGCTAATTATGATTATTCATATTTCTCCAAGGTCATTCATG CCAAAATTTATACGCTTATTAACGATGAAATTGCATCCTAGTAAAACTTT TCCTTTTTTTACCTTTGTATTTTTTCGTCAACTGTTGTTGCCAAAAAATG TACATTTTTGAGAAGTTTTCTTCCTGTAAACTTTTTAAGTTCTTGCGAAA TTTTCTTATTCTCAAAAGTTTCTTATTCTCAAAAGTTTCTTATTCTCAAA AGTTTCTACCATTATCACTTAACATACAATGTTCTTTTAAAAGGACAGAC TCGGCTATTCTCATTTTCTTCTCAAACTCTAAAAATATTCTTAATAATTT GCTCTTATAGGAAGAGGAGCGTTCAAAGTCTGTCGACGAAATCTACTCCA TTGATCGATTGGTCAAACGCCGAAGACTGTCATATGAAAAGGAGGGCGGT GAAAACATCAGGGCGGAGCGAATGCCATCAAAGGAAGAGGAAGAGAGTGT ATGGGCGGCCAATCATGAGCAATCGCGCCCACCATCAACATTTAAACGAT CCCCTACCCCTGAAGATCGTAATGAGACTATTACGCATGACAAAGAGAGG TCTATTTCACCTTCTAATGAAGATCGTGAGGAAAGAGAAAAATCAGACAA CGAAGAAGAACAACAACAAAGATTTCAAAGTGATAAAGAAAGAGAACGCT ACGAAGAACGAAAATCACCTTACGATGAAACATGGAGAATAAATAACACA CCACCCATCCACCCACCGCCACCATCTTCTTTTGAACACCATCGAACGTC TTTTACTTCCATGGCAACCGAACATAACAACCAACGGCAAATGGCAGCAA GATATCACCACCAGAGACCAGACTACGCAACACAAAGAAAATACTTACAA TCTGTCGTCACGTCAGGGCGACACTCGTCCTCAGCCCACTTACACGCGCC GTATCCTGAAAAATGCCACTGCGACGATTGTGTACAAAAGAGTTATTACA TGATGCGTGCTAATCGAGGCAAACCAGGCTACATCCAACCTCCAAAAACC ATTCATGACAAAGAGCGTCCACCAAGATTACCTTACAATCACGTCCGACC TTTTATCAACACTCGAGATTTCGAACCCAAAGAAACAAGATTTAGTTCAG AGCATACAAAACCTTATCATCGACTACCTAACGACTATCGCGGTAGTTCT AATGCTGTTAAATTGTCAACTAATCCGACAGAAATGAACTTGAACATTAA GGAAAGAACTGAAAATGCATTAGTTATATCTGTTGTGGTAGATGGTATAT ACTATAGTGGTACTCTTTTGACAAACATCAAACGTTAATTCCCTTCAAAG AAGAGAGACAATAATAGTTTGGGTAGGAAAAAAAAGTTCCCAGTTACTTC GGATGCAAAACGTCTTATTTACGCTACACTTTTTTTTGTACATATTATTT TAAAACAACAAAGAGATTTTTATTATTAAGTATTTTATTGAGATATTTTT TGCGGCGGATTTTCATATATTGATGTTTTGTTTGTATATTGCGGACTTTA TTATAAAAAACTTTATTATATTTGGTGCGACACAAAGTTTTTTTATACTA CTACTAGTACAGTTTTCAGAATGCATGAACAATTTTGTTTCGCGTTTTGA TAATTTTTGTACC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00049503TCONS_00049503Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00049503-proteinTCONS_00049503-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_16supercontigscaffold_16:196067..200979 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3 3.02 0.67 0.32 3.49 3.11 1.76 2.22 1.36 2.14 2.69 1.73 2.9 2.18 2.11 6.38 16.01 20.71 0.4 0.66 0.75 0.52 2.85 2.4 2.19 4.09 5.67 0.57 1.8 2.04