XLOC_031476 (gene) - C. hemisphaerica

Overview
NameXLOC_031476
Unique NameXLOC_031476
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_164:101171..106254+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031476 ID=XLOC_031476|Name=XLOC_031476|organism=Clytia hemisphaerica|type=gene|length=5084bp|location=Sequence derived from alignment at scaffold_164:101171..106254+ (Clytia hemisphaerica)
gtttttttgtcgttttttaccagtttttactattttttagagtcaaccag caataaactttgtttgatatcttttgattgaatgaatatttttgaaaatt tttttgatctaagattgaagaatcactcctgtgaaaatggtaattatacc acatttctacaaaaagttgatttttttctttttcatttttcatcttcatt ttccttttttttctcaatttttctacttgataatattccactcacgaata tctttttaacaagcacttaatcgtaacttgattcgaattctatcaaaagt tacagccatttttgtctccagctgcaaattatttcgagacagactttaac tCATATCTTCAGATATCTAACGAATCAGCCAAAGCTTACCTAAGCGACGT TTAGCACTACAGATCTTCTGATTGATGCATTTCactatttgtgatttttt gagtCCTGGAAATTTCTTCTGTCCATGTACTGAAAAAGAACAAGAAGCTC CATACCAATTCATCAAGAAGCTCCATACCAATTCATCAAGAAGCAACAAT AAACAAAAAAGGTCACCTGATGTCTATCAATGTAAGTTATTTCCTTACCT ATGATATCTCCGATTATGGCAGGGTTGAGAGCAACTTTTCTTTCTCCTGT TGACCTATTTACTCCTCCTTGTGCAGAACACCTATTGAAGTAAGAGATAC ATAAGTTAAAggaaaaccaaaattttttatAATCGACCAACTCACTTtca caaaattcacaaaaaaaaaatataatggtAGCATAAACCTTTGCAAATCG TTGgatgaaaaaactaaatttggcgggaatttaatttggcggttgctgaa aaatttaaccttgagatggcgtcaaaacagcgaaaaattagcaaaaacac tttaaaagagatcatattttcaaaatgtttaatttggcgggaatttaatt tggcaaatggcggaaaaaagaaattttggcgggaactcaatttggcggat ttcagtcaaatccgccaaattttcttttcgccaaaatttcttcctttaag gtatatttATTACAATTCCGAGGTTTTGTAGGTTTCCCATTTTGTAAAGA ATTTTTCGCAAGCGTAAACTTTTGCTAATTGCCCTgtgaagaattttcaa agacatttactttagtgaaaaaggtcaaaatttgcaaaagtttgtaTGCT TTAAGtacctttaagggaagaaatttttgcggaatttaattttgcgaatt tgggcgtaattcgcgaaattaaattctgcgaaacaccgaaattaaattcc gcgaaacacaccaaaatggctAAACCGCGAAATCAAATTCTGCGAAACAC GAATAaatctttttagggcaaaatagggcttttcgtagacaaataattcc ctcaaccgcgaaattaaattccgtgaagtttgccattttgaaactctgat tcgcgaaattaaattccgcgaaaatttcttctcgcgaaaatttcttccct taaggtagttttTCCCTTTACCAATaaggctcagccaaagaaattttcag aatcataatttccaaaacttcagaaaataacagaaaaacgaagaagagag ttacaaacaaaattggtgattttattttgtttaatctcttataaataGCA CAGCTTGGTCTCTAAAGAATGTACACTTTCTTAACTACCCATctgtcata atttttttaccaagcatagggttaagcataagTCAAAGCTCAAAATTGAG CATCATAGCTGGCCTCAccagaaaattggagttgctcaCAAAAAGTGTGT GAAAAACCCTCATTCAACAGTCaacactctaaaatctttagttttttcGG ACAACAAGTGATGTAGGAAATAACCTTCAAAATTGggatttattttatag atttggactttttttttctttttcagtaagTGCCTTTCCTttcttaaaaa ctaataaagGGGGTCCCAATAAGGTCCAGCGTGGGGGTGCTAATTTGACA CACGTGAGtagattttaaaaatgaaaatgtgaaATGTTCAAAAGATAGTG CTACTCAAACACATATTAcctatttattaaaaaaatgtgtagggAATATG TGTTTGTGTGTATGCTGATAACGTGTAGGACCACTTTAAATAGTGTTTAG GTATCATACCCTACTAATTCCTCGTCAGTAAAAGAAAGGTCAACTAATGC TCCTATCAATTTTGACCAGTcttcaaatgattttgatttccatcTCAAAT CGTCTATTTCTTTTCGTGAGAAAACCAGTGTTGTTGTGTATGGAAGTTTG ATGTTctgttaataaaaaaataaagttttaattttaaagTGTTAAATGAT TATCACCTTAAAGCCCATCAACATTATATTTTCTAAGGTCTGAATAGCTG CTTCAAAAAGTCCTGAGCTTGCATAGAGATTATAGTTAGAGAGTTATTCC TCAAGTagattaaaacaaaaatggtttGAAAATCTCAATTCAATTTAAAT TTAACATATAACAAACTAACATAAAATGATGAAGCTTTATAATCTTAAAA CTTAGGCTGTAGATGTTTAGTTTCCTAAATATTGAAAGATCAGATGCTTA CTCTAATATGGTCAAGTTCATGCCTTTgattctaaaataaaaacacacaa aaaaaaaactagaaaaaggTTACTCCTCCTGCCCTAGCCAAAATACAAGG AGATAGTGTTGATGCCTTTCAGAAGTTGTAACCCTCTTTAAAAATTGCAA CTGTTGTAGAAAAAGAATTTTGTATTCCTCCAAACCTAGAATAAAACTTG TTTTTCGCAGCTTCTATATATTGATAACTGTTTTAGACcgcaaaaaatta atttcaataaggtaactttaaattttttcaagttttataaaGAACTACAT GATTATTACCTTTTCGAAATTACTGCCTTGACTAGATTGTTGAAAATCAT CAGATTCTTGACTGGATTCCTGAAATAATTTGTGTTCTATTTTATATGGA TTGTGATAGATAAGCCagcaaagaaaatgaaaatgaaactcTTTGTCATA ACAAGCACAATAGTAAAGAGAAAATAAGTCATTGATAAAATACTTACTGT ATCAAAGGTGTCCTTTGTGACATTATTTGGTGTATTCTGCAGCAATTGCT AAAATTAAAGTGGATTATATACTGAGTATACCAACACTATTCTACCCGAG CTTGTTGTGCCTGGTTCTTGTTTGTTTTAACTCAGTTATTTTGACCACTT GAAACaaaaatagtttgtttatttacttttgttttttagaTGAAATGGTT ACCTTTGCGGGCTTTGTCATTGTGGACGCACCAGATAGAGGTGTTTAGGT ATAtagtttaaaaagaaactagcATCAAACAAAAGATTTAATAAAGCAGG TAGACATTTTTTCATATACTTATTTGTCTTGACTGCATTACTACGGCATA TTattttaaaagtgttaattctTTTACGAAAAAAAACTGGTTTGAGGTCA ATAACAGGAGGCTCAGATCGAGCTTACAAGTTCTGTACGTAGTATAAAAG AAAACTCTCAGTGTAGCCATTTCTGTGAAGATGTCTAAAATAGATTATAT TTATATTGACCTCTTGAGAATGAGAACCAATCAAAAGAGTGCATTTGACC TTTATTGACCTAGCcagtgaataaaaaattatttttgtattctAGATCAG TGTTGTGTTACCTTTGCATGCTTTGTCATTGTGGACACGGAAGATCGAGG TGTTGCTGCTAGTTCCTAAAAGGCAttcaaataagaacaaaatgatACCA GCCGTATAAATTTTAGTAAGTGCTTGtagatttcacaaatgagaGGTGCT ATTTGCAGGAAGATCATCAGAGTTTCCCTACATTAATtaatacaaaattt attttagaatgtacaaaatgttttaaattagtgttgaaaatattcaaacc ttgttttttgtgtgtgtgGTGTTCACCTTTTTTACACCAACCAAGTGATC TTCACATCTTCCGTGTGAGCCTGTTTCTGGTACATACTattgtttgaaaa taatttacacTGGATCAATTTCCCATGACAAATGTTTCAAATAGTTATTT TGCTTAATTAAAAGATCATAAttatttaaatataatttttagtgAACTCA CATTGGTTCCACAGCTGGTATCTTCAACTGATGACTTGAAAGAATCTGTC ACCATCACAAGATCTTTAACAAGGGTTTCGAATAATTCCAACTTTGACCC TGAAAaggtaaaagaaaatttttaaactaaTATTTGTTTGACACCTACAT TCAGATTCcaatctctttttttttattctgagAGTGATGCAAACAGatag tagaggccactatgtcttctCGTGTGCAGGtttaattttgcgattttgta ttttagaaaaatttgatttaaaaaatcaggAAACTAAGCACATTATATAA CATAATATCAATAAGATAACagaagttttttgaaatgaaTTCCTTACTTT GCTTTTCGATTAAGGCTTTTGCTTCTTCCAGGCGATCTTCAACTGATTGG CAGTTTGANAACACGGAAGATCGAGGTGTTGCTGGTAGTTCCTAAAAGGC AttcaaataagaacaaaatgatACCAGCCGTATAAATTTTAGTAAGTGCT TGtagatttcacaaatgagaGGTGCTATTTGCAGGAAGATCATCAGAGTT TCCCTACATTAATtaatacaaaatttattttagaatgtacaaaatgtttt aaattagtgttgaaaatattcaaaccttgttttttgtgtgtgtgGTGTTC ACCTTTTTTACACCAACCAAGTGATCTTCACATCTTCCGTGTGAGCCTGT TTCTGGTACATACTattgtttgaaaataatttacacTGGATCAATTTCCC ATGACAAATGTTTCAAATAGTTATTTTGCTTAATTAAAAGATCATAAtta tttaaatataatttttagtgAACTCACATTGGTTCCACAGCTGGTATCTT CAACTGATGACTTGAAAGAATCTGTCACCATCACAAGATCTTTAACAAGG GTTTCGAATAATTCCAACTTTGACCCTGAAAagg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00049638TCONS_00049638Clytia hemisphaericatranscript
TCONS_00049639TCONS_00049639Clytia hemisphaericatranscript
TCONS_00049640TCONS_00049640Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_164supercontigscaffold_164:101171..106254 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.69 1.78 1.49 0.79 19.19 12.66 9.89 11.96 7.97 8.82 8.81 5.47 7.38 7.16 9.6 10.94 10.25 10.05 2.9 5.04 11.1 10.41 4.4 5.54 7.46 8.74 5.52 3.68 6.18 5.31