XLOC_031574 (gene) - C. hemisphaerica

Overview
NameXLOC_031574
Unique NameXLOC_031574
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_166:404529..413538-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031574 ID=XLOC_031574|Name=XLOC_031574|organism=Clytia hemisphaerica|type=gene|length=9010bp|location=Sequence derived from alignment at scaffold_166:404529..413538- (Clytia hemisphaerica)
TAGCTAACTCAAACAAAATAGAAATCAAGGAAAGTCATTATCAACCAGAA CCGAATATGGAAAAATGAGATTCAATCAATTTTAAAGAATTTTGACATCA TCAACGCGTTTGAATCTAAGATGACACGAGTAATTACCCAAGATTCCGTG GAAACTTTTGCATGGGTTTTCTTACACAAGAGAAACTTCTTTCGTCGAAA ATTGATCTCACTCGTGGGATGGAGGTATGAGTCATTTTTTTATTTGGTAA TTTATAACTTAACTCAAATCCAGGGGATAGACCTTTTCATAAACTACGTC AGCAGCAACGCTTACTTCGTTTTCATAATAGTTGCTATGGTAATTGAGGC GCCCAATTTTGTGGTTGGGGTTAATTTTCGTTTTTTCTTTGTAGTATTAC CAAAACTTCTTTTCCGTCTCGAAGAATCTTTGGTAATACTTTAGAACACG CTTAAGTACGTTCCTCCACTCTGTTTGCGTTGCAAATAATATTGAGGTAA TCCAGGATAATCCACTGACCTTCATATAACCCTGGACCAAGCAATATCTG CCATCTTTGATTGGAGTTTTTTTAGAATTGGTACCCATGGAGGAGAAGCC ATTGTAATGCTAAAAATTAACGTCTAACGCCGCTACATCATCAAAATAAT TTGAGGAAAAGTAGACCTAGCGCTCTCGATGCATTTACACCGTTATCGAG TAGTGCCGACATTAGGGTACCAATCACTGACCTTTATATAACCCTGGACC AAACAATATCTGCCATCTTTGATTGGAGTTTTTTTAGAATTGGTACCCAA GGAGAAGCCATTGCAATGCTAAAAATTAACGTCTAACGCCGCTATATCAT CAAAAGAATTTGAGGAAAAGTAGACCTAGCTCTCTCGATGCATTTACACC GCTATCGAGTAGTGCCGACATTAGGGTACCAATTTTCAAAAAACTCCGAT CAAAGATTTTGCTTGGCTGGGATTGAGAAGCTTTGTCCAGGGTTATATAA AGGTCAGTGGTACCAATATATAAAGGTCAGTGGGATAATCACGACGATCG ACGATCGGCGAAAAATTTAAGGCTAGTGAAAATACGCTATTTTATTGCTT GAAACTCACTAGCCTGTTACATTTTTCGGCCGTTTTCGTGATGATGCCGA TTTGCTAGTTAACCTCACAAATATTTAGAGTGTAGAGTCTGAGAGTCTTG AGAAGCACTACTGAAAGGTGAAAACAACAGCTTTTTAATTGGATATTCTT TTTCCGGGAAATCTGTTAGACAAAACTAGAGTGCCTTTTCTGGGTAAATA TGGGATGAAAATTCCATTTTGCGTATGAAGATAAAAACTTTCTTTTGACC ATTGTTTTTTGAGAGGGAAAAAGGGGTGACCAAAAAAACACCCCTGTGTC ACAGACCCGGTGGACACCCCGCCCCGGTGGAAAAATAGGCCAAAAAATCG TCCCCGGTGGAAAAAATACCCTACATTTTCAACCCCACTGGGAAATTGAC CTATGATTCTATCCCCATTGAAAATTGAATGGAAAAAATTGGACTCCAAA ACCATCCCCACTGGAATTTTCGAGCTGGAACCACTGAGGGAAAAGGTTCC ACCGGGGCACTGAGACAGTGGTGTAAAAAACAAGGGGACAAAAAAAGTCT CAGTTAATAATTCGTTGCTCTTTTCCTATATTTGCCTCCCAAGTTTTATC AATTTCTTTAATAAGTAACTATGCTTCTTCTCTTGGCTTAAAAGAAATCT TACTGCCGGGCTGCTTGGAATCCTGAAAAAGATCAAATCTCAATATTGAT GGTAGTAAAATCACTTTTCACTGCAATCTTTTTATGTATGTTACTTTTCT CTCCCCCCCCCCCCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCAAAAAAAAAGGAA AAAGTAAGGCTCAAAATGTTGACTTACAAAATAGAAATTTTTAAGAAGCT ATTCAGCAAAAATCTCAATGTCTGCTTTTGAGGGGGTAGGCTCGGGACCC TGGAGGAATAAGGTCAGACCACAATATGGTGGTGAAATCACTTTTGACCG CAATCTTTATATATCTGTTCTCTATTCCCTTCCCACAAGAAGAAAAAGGC TCAAAACTTTTTAACAGACAAAATAGAAATTCCATAAGGTTCAATTCTGC AAACAAGCTTGACGAAACCGCCTGTTTTTCTTCTTCTTCTTCTTCTTCTT CTTCTTCTTCTTCTTCTTCTTTCTATATAGAAATAAAATAGAAAGTAGAT TCTTATCTGTTACACTCCTCTAAACCACAATATGTACACCGGATCATTTC GTATTCAGCTTATGTAACTTTAAATTGAAAACTCTTAAGAATTACTAAGT TTGCAAAATGACGGGTATGTTCGAGCCAAAGTTTGAAAATTGACCCTTAG AAGACTGAATTTCGAAAATTGTCCATTTTTTGATGTTTTTGCCACCCTCA AAAAGTCGTTTTTAAGAATCTGTGTCTCTTTGAGGGAGTCAACTTTGGAT TTTCATAATTTTGGAACCCTTAAAGAGACTCTATTGCTTTTAAATGGTTT TTGTAACCCTTTGCGGGACTTTCGAGGGTGTGATAAAGGACACTTAAAGA TCGCAAATACCCGGCACCTATTTTGCCTAAGTATCCCCCGCCCCGGTATA CACCATGAAAATAATTTCAGGTCCTGTAATTATTTTCCTTTAAAAATACT CGATATCTACGAAATTTGAAAATTTATTGCGTAGAGGCTATTATGCTACG TGTTATACGTGAGATAATTTGATTTGAATACACCTTGAGAAAAGCGATAA TACAAAAACAATAAGAAGACTTTTACTTGTCAGCTCCGTACCTCACCAAA ACATTGCCTCCTTGTTACTACTGCAAGAAAAAAACTGTTTTATTAGAGCG GGAGAATCTCAACTCTAAAGATGACCGTTTAGTATTGTTTATAACTTATA TTGGATCATCCATTCTGGGCGTGCCACGCCCTGTTCTGACGGGATATGGC GAATATGAAGATCTGACCTGGTTGTTCAGCTGAACTATTCAAAACGATGT TGCCTAAAAACAAAAGTGACTGTTTTTGTTTTTGACTACCGTTTGATTTT GATGAGATTGTCCAAAATCTGGATGAAAAACATTCAAGCGGTCCGCCAAC CTGGGTAGATCTTTTTAAATAGCCATAGCCTTCAAACATGTCATGCGTGG AGTAACTAGGATCTTCTATGCTGTGAACATTAAATGGACGCTTTATTACC CAACTGGCACACAACGTTGTTATAACGTTCAAATAACATGGACGTTGTTT TGACGTTGTGTGTCGTCTGGGTAACGTTTGCCGCTGCTTTGGTAAAGGAT AGATTTTCTCAGTTTATGGATTTGAAAGAAACGATCTAGTGAAGAGGGCG ACCTGACCAACTAAAGAAGACGGTAAAGAAGCACTTTTACCGTCCTCGAT TTTATTGTTCAAAACTGCGTGACTTTCCAAACCGCTCCAGTCCCTTTACT GTCCTCAAAAGAGAGAGAAGCTGACCCTCCGATATCATCGGACCGGGCCC TTGCTCGGGATAGTTTCCTACCCCCTACATAGGGAAATCACAACGCTTAC CAGACATTGTATTCTGTGCTCGCGACACATCAGAGCTGTGCTGTATCGAT GATGATACTCGAACAGTACTATTATATAAGTACTTAATATATAAACTCCC TATTTCTTTATTTCAGATGGTTTGAACGTATCGTCATTCTTGTCATCATA CTAAACTGCATCATGTTAGCGCTATACAACCCTATGGATAAGTATTGCCA AACCAGTCGTTGTTCAATGTTAGAGAAATTGGAACATTTCATTTTCTCAT TTTTCTTGATCGAAATGCTAGTTAAAATGACTGCTATGGGAATTTTTGGA AGCAAAGGATATTTTACTGACCGGTGGAATTTGTTTGATTTCCTGATTGT GGTTACAGGGTAAGTTTGCTGATCCATTTGGCCAATGATCCCTAACTACT TGACTATATAAAAGCGTATCAAGTTTTAAAGCTGACTAGTCCTTCATATT ATTTTCAATTCTGGTCGTTAGCAAGGTGATGTGAATGTTTTGAAATTCGA ACGTCCGAAAATCTAAGGTAAAATAGAAAACAGCATGGCGGACTAGTCGC CTATCACGTAAATTAGAAAAACAACTCGATGGAACATACACACACCTTCT AAGAAGAGTTAAAAATCTTTCCTGGCGCGATCATCCCACTAAAAACACCA TCTATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNACGTGTTCAGTTTGCTGGTCATTGCC TTCGTGCATCCACAGAAGTCATCTCCTCTCTCTTACTCTGGAAACCCAAG CGGCTGGTTCAAAGATCGAGAAAGTTAACTTTTACTGACGCAGTTAGCAG GGACACTGGACTTCTTTTTAGTGACCTGGAGACAGCCATGCGCGACCGCG ATTCTTGGCGCCAGAGGGTGGAATCCATCATCTCGACCGCGGCCGAAAGA TGATGATGATGATGATGAACTAGAAGTCACTGAACTAGTATTTGAAGGAA TATAGCATCTGTGCATTTGCCACACAAAGTCATTGGAACGTTTCTTCTAA AGCTGTATATGTTGTGGCCACTAAATTGACGTCATTTTAACGTTCTGTGT GAGCTAGAATATGATCAAAATGGTCTTCGTTCCCAGCGTATTAACTGCTT TTCGATGTTTACTGATGCCAAATATAAATTATACTGTAAACTAAAGAGTA ATTTAGATTTACGTACCTTATCGGCCCTTTTTACGCCGGCACTAATTTAA TGCCGGCCCCTTTAACGCCGACCCTTATTACGCCACAAGCCCAAAAATAA CGCCAATAAGGGCCGGTGTAAAAAGGGCCGATAAGGTATTTGTTTGATTT TGCAGTGTAATTTCTCTTCCCGTCTCGGACGGATTTCCGTCTCAGCGAGA TTACATTAAGAGGCTTCCCCGTCTTTAAATTCTGAATAATTGAAAAGAAA CTTGTCTTATTTGTTGTGTAAAGTCCATTTCTGTCTGAGGCGAAAAGACT TTACTTTAAACCCCGATTTTGTTTATTCATTCAAACAGGATTGTTGAAAG CTTGGGTACGACTGGTGGATTTTTGACGACGGTTCGATTGTGTCGTATTC TTCGGCCTCTTCGCGCCATCAACCGCGTTCCTAGTAAGATCAATCTTCAC GGTTCTTCACGTTTTACTCTTAAAATGTTTCCATTTCCGTTTATTTTCAT TAAAACTAATGTAACTACATTCAACTCTTTTCAATTCGAATTTCTTTTAT CCGAATTCTATTTTCAGAAAGCTGTAATTCAAACTAAAATATTGGTCCCC TCAGGTGGAAAGTGGCTTTAATTACTCTCTGTAGTTCGAATCCTTTTCTA ATTCGAATAAAATTATTGATCCCTTGAAGATCGAACTAGAGAGAGAGTCA ACGGTGTATTTATTTTTTACTACAGATATTCGGATCCTGGTTAATCTCCT CATGGATACAATCCCAATGCTTGGCAACGTTTTGATTTTGGCGTTCCTTG TTTTCGCTTGTTTTGGAATCCTCGGTGTACAGTTGTTTCAAGGGAAACTT CGAAGCCGTTGCTATTGGTCAGGTGATACGAACGTAGATCATTCTCTCAA TGATACTCTGGCTGTTAATAGAAGGTAAGTTTTAAGCCTAATACATAAGT ACAGTAGGTTCGCCAGAGCTTGAAATCTTCTTAAACGACTGTTAACTTCG TAGCGGTTGCTATTGGTCAGGAGATGCGGATGTTGAGCATTCTCTCGATG ATACTCTGGCTGCTAATCGAAGGTAAGTTTTAAGGCATCGGGCAAATTGT CCGGGAGTAATTGTTGAAGGGGAAATTGTCTTAGAAGAATGATCCAGGGT GGGGCAACTTTCCGGAGAGAAATCGTCCCTGGGACAATTCTCTTTTCACG GTTTTAAGGCCTCATAAGTGCAGTAGGCTCACAAGAGTTTGAGAAAACTC ATCTCCATAAACGACTGTCAACATCAACGTCGTAGTCGTTGTTATTGGTC TTGAGTTAAGTGGATTGGTCTTTCTCTCAATGATACTCTAGCTGTTAATA GAAGGTAGGTTTAAGGCCTCGTTATTTAGAAGGTTCACCCAAGTTTCTTG GTTCACCAGAGCTTAAAATGCTGAGCTCGACTGTTAACTTCGTAGTGGTT GTCATTGATGCTATCTAGGCTTTTCCATGTTGATAACAACGTTGTTTCAA CGCTCTTATAGCGTTATATATGGACTTTACAGTCCGTGCAACTTTTAAAA AGACTCTCTCTACAAATCGAAGATTCTATTATCGGACCAAGATATCTTTT AAATTTAGAACACATCTCTCCATAGCTCAAACATTCCTCATTAAAGAGGA ACTTGATTTCTAGGATATATATTTTGCCCAGAAATCAAATCTTAATATCA TACAATTCATCACCAAAATATACTTCAATGTCTTATCATTGATGTTTGTA TCATAAATACACACTCTTTGATAACCATTCCTTATGAATGATCGTCTTTC TATATTCAGCAAATTTCCAGAATTCTACATTCCGACGACGTCAGTAGACT ATGTTTGTCATCTTCCACATGATTTTGGTTCAAGGTCATGTGATCAAATA CCCAAACACTACGATTTCAAACTTTGTCAGGTAAATATTATAAAATGAAT TTTTTTTTTTGATTTTACTATTCTTGATATACATGACGTAATATTTTCTA TGGAAACACCCTGGTTTTTGCTGTAGTGGCAAATATACATAAGAACACCC CCTTCTCACAGACCCACTGGGAACCCTTATCAATGGAAAACTTAGCCAAA ATATCGTTCCTAGTGGAAAAATGTCCTCCATTTTTGTAATAATCAAAAAA ACCTGCCCTCGCTACAAAATATGATGCCCTCTGAATTTTCTGACTTGTAA ACAAAAGTATTGAAGTCCCAAGCCATAAAAAAACATGGAAATATCAATCC CTATCGAGTTTTAGTCCGTTGTTTTTATTTCCACTGGCTGAAAAAATCCT TCATGGTCTGTGAAAAGGGGGTGTACAAGAGAAAAATTGTTCAAAGTTTA CCACTACTGGCGAAACCGGGGTGTGTCCGTAGAACATGATAACGTCATGT TATCATGAATTTCTCGTATCAGACCTTCGGATATTTACTGAATTTTCAGA ATACTTTAACATTTGAGGTTGGACGAGATGTAAATCTCCTACATACTGAG GGATAAACTCTGGGATAAAGTAAAGTGCTTTTGCAATTTCTAGAGAAAAT TAGAAAATCTAGCAAGGTTACAGACTTTCTTTATCTTTTGAATATTAACA AGATATTCACCCCAACGCAATCGCCAAGAAGTGGCACTCGGAAATATTGA GTTTTTATTTGTGTGTGGTTTTTAATAGTCGAGGCAGCTTTTTTTTGTTT ACAGAAGTCCCAACTTTAATTGTCAAGAACCAACCTCGCTCATTATCTGT TTCTGATGGTTACTGATAGCGCCAGATGATATAATCTCTGGCGTCTATCA GTAACGTAAATAAAGCCTGGGATACACAGGGACGAGGTTGGTCAAGAACG TTTCTTTTTTTTCTTTTATCCACAGACGTACTACAATCTATATGACCAAA AGTTTGAAAATGCCACCGCTAACAACTCGTGTTTAGATGCACGCCGGTAT TACCGTTCTTGTCGACAAGATGGACCTAATCCGTATTACGGTAGTGTTTC TTTTGATAATATCGCACTGGCTTTTGTTTTCATATATCAGGTATGTACTC CCCTTTGATATTGAGCTCTCTAAATATAATAACCATAATGCGGGGGTAAA ACTTAAATTTTACTTTTACCGGGAAAAAGTCGAGTTAAAAGTTTTTTTTT TAAATAAGAGTGCCATTGTTTGCTTACTCATCCATTTTAATTCACAAGCT TTTTCACTATGGATTGACACGGATGTGGAACAAGATTGGTCAGGAAGAAG AAATGGAAAACTTTTTTTTTTGCTTACATCAGAATAATATAACCATAGGC AGACACTATCCCGATATGAAATATGTGCCTAATATGAAACGGGAACACTT TTGTAAAAATAAAAAAGAACATCCGAAGGCTTAAAAAATTTTGGGTGTTC TTATAAAAAAACGTGTAGTGTAATTTCCACTGACCTTTATATACCCTGGA CCAAGCCTCTCAATCCCAGCCAAGCAAAATCTTTGATCGGAGTTTTTTGA AAATTGGTACCCTAATGGCGGCACTACTCGATAGCGGTGTAAATGCATCG AGAGCGCTAGGTCTACTTTTCCTCAAAATCTTTTGATGATGTAGCGGCGT TAGACGTTAATTTTTAACATCGCAATGGCTTCTCCTCGGGTACCAAATTC CAATAAAACTCCAATCAAAGATGGCAGATATTGCTTGATCCAGGGTTATA TAAAGGTCAGTGGTAATTTCCTTAGAAGGCATAAACGCTCTTATTCGTGA TAAGCAGCATTGCAATGTCTTCCACGGACCCAACAGCTGATTGGTTGAAA GTGACGTATTGACTTATTTTACGTTACTTGCAACCAATCAGCTGTCGGGT CCGTCATGTAATGTCAGAATACCTTCCAATGGCGCATATCATGAATTCTA TTCTGAACTTTCTAGGTGGTGACATTAGAAGGATGGAGTGATCTGATGTA CCTAGTACAAGATTCTTACAGCTCGTATGCCTGGATCTACTTCATCACTT TAATTTCAGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00049811TCONS_00049811Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00049811-proteinTCONS_00049811-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_166supercontigscaffold_166:404529..413538 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.08 0.11 0 0 0.15 0.04 3.52 4.44 2.53 2.78 4.82 3.55 1.19 0.81 0.71 0.6 0.4 1.26 0.24 1.18 1.91 1.24 0.48 0.95 2.2 2.22 4.22 4.12 0.68 0.47