XLOC_031672 (gene) - C. hemisphaerica

Overview
NameXLOC_031672
Unique NameXLOC_031672
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_167:1698945..1705548+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031672 ID=XLOC_031672|Name=XLOC_031672|organism=Clytia hemisphaerica|type=gene|length=6604bp|location=Sequence derived from alignment at scaffold_167:1698945..1705548+ (Clytia hemisphaerica)
AGAACattccaaaacaaaatggctgctcGCTGGATGCCTTTCGAAAAAGT AAGTGTGCAAAAATGCTCCTATCTGTATGACTGTTTGTTTAGAGGTTTCA TATGACATGAAGATCTTTGATTTTAGAGGTTCCTTCATGTTTTGGAGCAA ATCTAAGGGAAtcagtaaaataattttgttttgatcataATAAGAAAATA AGGGTGTcaaaaattagaagagggatgtatGTCGGATATTAGcaattaga ccaacttacggtatagcTTCGTAAATAGTGCTGTGTACATCAGTGgttag tattcaattatcatcccttttattttcatttctgaaaCATTTTTTCCCAA TGTGttagacagttacatcaatatgccttcttacctgtctttaaaaatat aaataaaagtaatcaccgaaaaggacgcgaaaaaaaaagacataagtgtg agaacagagtaatcaaactcgttagaaaaagtaccattagaagtcataaa aaatcaacctgaataaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNt ctgttttatttaccccctggtgacttaacaaaagagacttaactcgatgt tacaatccaattattgaaagtttgtctcggcctttttataatgagcgaga cattcgttctctgattacgcaattttcatattgacatttttgaggcattt tgatgtaactgttagACCtttcagtgaagtcaagtttgaaattattctgc attagaaaaatggttaaaagcagtcaaaatgCAATTTACctttacctcct gagtttgtctttgttatgctaaaatataataaacctttgtcatgctgtgt aatagaccttttcgcctttccatctgccatcttgaattgtatgcaaaaat agagtagaggaacgaaaaagccgtggttggatttagttggaatgtatgca aaacatatgcaagtttacacaaagattaaaaagacaacaaagcatcttat aaataaatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN Natcttataaataaatattataatcattagaacaataaaagatggaattt cttaatccaaaaagaaatattcacagaacaacaaaagccttttataaatt tattcttaaagacatagcatattctgttttcatgccattaagaaattccg agaagacggagtacacacatcaaaccttcaaaacacgcaaactgaaaagc agtaattatgacgtcacacattatctatctatatatttcatactaAAAGG TCCTAGGACCCCATTATCCGTACatttgtttgttaaaaaaaatgaaaaat gaataaataaataaatgaaatgtTAAAGAGCAATAAAATAATcattatca ttgttttgatttgatcatttggcggctctattcccaggagaataatttac agtcagccgaataaggattattttttaccttcgctggtgatttttcagtt tgagtttagGTATGTATAATGTTATggatttttgaagtgcttgttctaag agatgagcgaatatatttattttaattttcaagagaagcaaatttaatga ttcttctacaagattacacttaatataatgccaattatgcatgtaagttt tatattaatactttctttttgcatatgttttgcatacaattcaatatggc ggatggaaaggcgaaaaggtctattataaaAATCTCATCACTACCGTAat tggtcctaaatccgacagcccttcctaaatccgatggggtctttcaaaga tacaaactaaaataaaaacaaaccttttgctgtgacgcaatgaagatacc attaccaaagtgtcaactagactgagagatttgatacactgaaccaattg aaccaaaacattaattgcttcttatacaaagcATAAttctttattacaaa attgttactGTAACGTTTTAAACGTGAGCAatggattcagaataatagag gtaattatttttaaaactcacactttttttaccacattaattgacatatt gacattttagtcatcttgatagatgttttgtttcgagagttcttgcaata cagtttattgttcaacttggagagggaataaaattttttttcatagcagt tatttggggggggggttgaatttaggcagggctgtaggatttaggaccac tcatggTACTTCTctgccatcttgtttcactttaaataccgtgttttaaa attccttagctacattatatgtacggaaaaggttttctccaggttttctC AATCCCGGGATGAAATTACAAGGGCGGTTCCGCCCGCTTAtagcaataag caaaaagctcatCCCAGCTTTTGAAAAAACTACTTAAAAGCACTATAGCT CTCACCCAacaaaattgtcaattttgaaaattaaatatacAGGAATCCAT TTAAAATTTAGCTTTCAATGATAACGtagtcgtctaagaaaacagctata ttattttttagaatcttccttacaatctagttttcatatttatagaaact agattgctgacgtgtggaaaagAATGTCGGCATGACtgatctttttgttt tgataataacatcaaagcggaaattaattttcttctcgtttctttctttc ctttttctttcttattagtTCACGCTTTCCCTCACTACCTACAGCgtgtg gttagctcaagcgtATAGATTGTCTGTCTCATATTCATGGGATTCCGAGT TCGATTCTAATGGATGtccaattttccaattcttgattttgtttttgtga tactctcatcactttaattttgaatcacATTTTCATTAGAGTGAAGAGAT ATTGACGtgttatgtaatgttaattgctattattaattacgcgttcaatt cgaatctatgatctgttccctccTAGTGAGGAGTTTAATACCCTTATAAC AACTGTACTTTTATTCAAATAAcgaccacgcaagaaagataagcaaacga ttggatcaagtgtcaaacattttgacccggaaatcaattattattctgcc tttgaaagaagttatttgacaattctcttacaaagaattgctcgctcact cgctggctgaaagtgaaagtgaaagtagtgaaactgaaactgtcagtcaC TAAACACAGGCGCAAACGTCAATacccgttcttctatatctcagccttga ataatcgcttgtggcaaaaaaaagattgaagaaaaaaaaacttaaaaaag ttcttattaagtgatgctatcatagcttatctaaaccttagacagagagc ggaggtaatatatgctagctacttgtttgattgaccttcattataaaaga gggttaaaaaaagaaaattgaagaattgaaaaattggacatCCATTGGAA TCAAACTCGGAACCCTTCGCTTATGAGGCAGACaatctaaccgcttgagc taaccacgctttgtAAGTGGCGAGGGAAAACCTGAACTGATAAGaaataa aaaggaaagaaagaaacgagaagaaaattagttcccgctttgatgttatt atcgaaacaaaaggatcagtcatgccgaaattcctttccacacgtcagca atctagtttctataattatgaaaactagattgtaaggaagattctaaaaa ataatagctgttttcttagacgactaCGTTTGATATATAACATCATGGGG TTTTGTGAATGTGCTGGAAAGATATTGGTTCTTGAATGGTCAATAAATGG CCCATTTTGGCCCAAAATTTGATGAAACAGTGAAAATCACAAATATgaat aatatattttctcatCTTATTTCAACATgttgtcatcaaaatttttatta aatcttTCCTAAGGCATGTATTTTCCAAGATCAAAAATCATATACTGAAA AATTAGCActgttttaaaaaaatggatatttttggaaaacaatTGGAATG AAACATTAACAAatctgttaatatttttcccTTGACTATTTCTAAGGTAt gaataagtttgaaattaaagTTTGATAGCTAAATATCATCAGATGACTTG TTTGAACATGTCATATAAATATCAAGTTGATTGATGAACAAGTTTTGgag aaaagataattttaaaacaccgACCAGGATTTTCTGTCACGGCGCAACGC AAACCTAAAAGTGCACTAAAAGATTACCTTGGTGTTTTTAAGTGAATTCT TTTAGTGATTCTCAACAGCCCTATAGGTctaatattttaaacatttaaaa aatgaaaaaattctgctttgttcaattttttttttaattatgattTTCCG TCATGGCGCAACAAAATTTTAGACCCCCAAAAAACTTCATTGGACAACGG AAATGACTTAAACTCTTCAGTAACTTCCAAATTATCAATATTTAAAACAT TTGGTAAAGTAAACTACTTTGTAGCATTTATATGcccattttgtaaaaat cttgatttttgttAACTTTCCAGGGATTTTAGCCCAGAAATCGGAAATTT GGTCATAACTTTTCAATAGAGCATGTTCCTGCTCtgattttttcacaaat tattCATGAAATGATATCCTTTAtgtctatataaaaatttttgactttct gaaaacttcattttttgccatttttcagactttttgggacaagctttttg cttattgcttTATTTTCCTTTCGATGTTGAGCCCCGGGGATACTTAAtaa taaagagattttaagattaatgttgaaatgtgtattttttcgatactcaa caaaaaataaggtggttttaaacaaatctttgacaaattagcgtttcttt ctgttctaatgcAAATCACATTGAAAAAAGAGTATATTTCCGCcgttact ttcactttcactttcgtgttacgcgaatctgattggatgaataccgctcg ctaacaaattctgattggctgtaagtctttagattctggattctgattgg attatTTCCTGTGccacggttgaattttgattgaggTACAGGGTACCcat tgctaagaccttatgttatgTTGAAAACAAAACCGATTATGGCAAAAATT CCTCAAAAACAGGGATTTttgtaatacctcaaatattgatacttgactgt actgcCTTTATATCTGTAAATATGGATGGCAggtttcattgaaaataaac aaattttttatGGTTTAAGCCAAATATAATATTCTGGGTACTGCATGGTa gatataatattttttcttgtcaTCCTAACCTATAATCTCTCTTAATACCT TGGATTCACAGTAACAAGAGGTGAAAATACAACTGTAGAATGATTGCTGG GAGATTTTTTGCAAACAACTAGCAAAGAGTTCGAATAAATATGAGTGCTG ATTCAGAATACCAGTAAGTTTGTTTCGTCATAACCTTGCTCTTTACTGTA TTTAGTCTATGAAAATGGACCAATGTTTGAATATTTTAGGTGTTTTATGG AAATGATTACTTACAATCACACCACATTAAGTGTAATTCCTAAGAATTTG ATGAgtggttttatatttttcaagtttgaaaGGACTAGCTGATAAATAGT TTCACTAATTTTACTATATTTACCTCATTTTCCTCCTTTATTGTTCTTTT AGTCACCTTTAgattattttattgttttcagaGAAAGCCTCAAAATCAAG CAGGAGCAAGATGAGGAGAGAAGGTTTGAGAATCTACTATTTGTCTTTTC TATCCCCCCCCCCTTCAGACcctgttttttatcaaaatctacCTTTATTA AAAATGGATATATTTTTGTGGTTAATAAAACTCTTGTATGTACgtaattt ttgtgaattttttggCTGAACTTCCTGAAATTTTCTATCATTCATAAATT GCAAtataaaaaatcaggaaattctATACACAACATTATTGCATTATGAT CTCTTATGATAATGTTTTTGTCTCCTCTTTGTCATTATTTCCTCATCCAA TATAAGATGCTGTAAtgatttttcttgtttcatCATCATATGTCTTATTA ACTCAATCACAAAATTTGATACATGCTGTGCTACAAGTTTCCCAGGAACT CACAATCTCGCAAAACACGTTTGTTGAAAAAAAGTCACAGTTTGCAGAAA AATTAGTACTGGCAATAAACACTTTATTCAAGGGTTCAATTTGGTTTGCT TTTCTaaactttaatttaaaaatataatttcgaaCTGTCTTAGGTAATCT ATTTGTTTGTTATTTGGAAATCGATTATTTATATAACATATAAacaatta gaaatattttattcatGATTGTTTTGTGatgatttattttgattcaGGGG ACGAGAACATCAACAATGGATGGAAAGAGAGCACGGACAAGAGCATAATA CTCAAAGGAGACCAGAAGAGGATGAAAAACAGCCTCATAGAGAGGAAGCC GAGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00049990TCONS_00049990Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_167supercontigscaffold_167:1698945..1705548 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
40.93 41.84 14.71 13.52 130.57 101.92 81.97 87.17 40.46 38.62 40.67 26.47 28.01 30.99 28.61 30.46 49.64 39.67 17.99 22.77 26.64 29.51 37.46 34.87 43.1 45.63 21.05 6.91 25.77 26.7