XLOC_031904 (gene) - C. hemisphaerica

Overview
NameXLOC_031904
Unique NameXLOC_031904
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_17:159442..169311+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031904 ID=XLOC_031904|Name=XLOC_031904|organism=Clytia hemisphaerica|type=gene|length=9870bp|location=Sequence derived from alignment at scaffold_17:159442..169311+ (Clytia hemisphaerica)
agaacatggaaataaaaataagaatttgacaCAGCTactctttttttgaa ataatggcAATGAATAATTTGTATGGATCTACAATGTCTTTGGATTGTGG GGGTAACCTCAAATCATCTTTTAACCAATCAACACTGAGCTTGATAAGCG TCAACACTACTACTAGCTCAATCAGTACTAAGGTACATGACTTCAATACA AAAGGTATGGAATGTAGGTCAGTCGGTCAAAGAAAAAACTATTTTGACGA TTTATGAAAGTTCAGTTTACATTTGGGTaatattgaaatgaaaatggaaG AGCTAGAAAGGGAATTAACGATACTTAAGCTCAAGACGGACTTGCATAAT AGAGTGTACCTCTATAAGAAggacaatagaatttttaatttgaagaaaag gTAGGTAGGTTTCGATGTAGGGTCAGTTTGATGACAGCAAACTGACATTT TTGTCcagcctgaaaaaaaatttaattacgTAGTGAACAATGGCTAGCTT ACTTTTCAACCTTGCAAAAATTCTTCCTGGTTTTTGTTGTCCTTGTGAAG TGACATCTATAAACACCTTtacataaataaaaaatgaactGCTAAAATTC CTAATATTTGTTTAaacttattttcagattttgtatTTTGTCTAACAAAC AAATCGTTGATGCAAAATAAAGATCTGATGGCAGCAATCCAGGTATTTTT TCATCGTGTAGCCTCCAAAGTTCAGTTATGATTTGCTCTTAAATAACGTG CGttcgataaaaaattttttttatcaatctcAATAGATTTCATCAGCAAT TTTATTCTCATGATTTAGTACTTCAAACCTGAATACACGCTGGTGGACAC AGATGAAAACCTTGAAGTTATGTCAAATGAGCGCagaaaatacttttttg tgtGTCAAAACTTTGATGACGAGCGTTTCAAGACTTTACGAAGGAAGAAA TGTCGCATTTGTGGGCCACCTCTCCTCGTATACTTACACAGCCGAAAAAG AGCTCTCCCTGATACCTCACGTCCCTTGTTTAATGGCTCAATGTTCGGTG TAGCTGTCTGTTTTACTGGCTTCGCTTCAAAAGGGAATATGGTTAATCAA CTGGCAGATCTTGTTCATTTTATGGGTGGAAGTGTTCGAAGAGATTTCAG TGGCAAAATTACACATCTTGTAGCTAACCTTGCACAGGGTCAGAAGTATA AGGTAgttatttaaaatttaattttttagctGTGGAATGACACTGttata atttaagtttttaaaGATTATGTACGTCGCTTGCTGCTTCTAAATTCTAA TGAAGATGCAAAACTTTTCCTCTTTAAAATACTAGGTTCATTTTTTCTGC GTATCACTGTTAGAGCTATATTGGCTTTTCTAACTAATTGCGAGAAACAA AATCATATAAGAGTTCAATATAGCTAAACACGTTATCGAActttaaaaat cataaaatatcagATGTAAGATTTTAATTCTCTGCGggagaagaagatga agaagataaCGAGGAAAAAATTCACATTGCAAACCATAAAGTCATAAAAT CTCTTCTATCCATTTCACTCTTTTGATCGTTCATTTCTCATCTTTAAGAA TGCAGTAAATCTTGGCAAACATATAATGACTGATGGCTGGGTGTTGGAAG CCTGGGAGAAAAGACATACATCGTAAGACATTGTATTCCTATTGATCATT TCACTTTTTCATAAGCCATGAAAATTTACTCATGAAACGCCTGACCAATT TAATTTCCTCTTCCTTATAGATCTTTCAAAGCATCCGAAAGCTCATTTGT AAGTTTCATTATTTTAGGTTTTGAAGCCAAGTAAGATATATTCAATCTAT TTGTATGAGATCTACCGCcccaaagatttttttcttcaaatcgaAACCGC TATTATCATCGTGTCAGTCTCGTTCTATCCCAAGCTTAAATATCGTGAAT TCTCGTGAATGTTGTGAATATCGATATTCTCGTAAATATCGTGAATGCAA ACTTTTCATGAATTTTCATAATcgtcgaaataaaaaataaattcgaCCCA CCTCAAAAAATGGGGCTGGGTGATGGTAAACCAGcatttttaagtccagc ctgatTGACTGGTTGATTCGTTGGTTTGAGTGAAGTCAAGATATTCTTCC AAATGATTTTTGAGCTTGATTTTCtatcatttttcataactttcaaaTTT CTATTCTTTCAGGTCAACTCGTTCAACATGAAACCTTTTCATGGATTGAA AATTAGCTTTTTGGGTTTTTCCCCTGACGAAACTGAACACATGCAGGACA TAACTTTACAAAATGGTAACAAATGTCTTCATTAATGTATTTTCTCTATT TGGCATTGACCTTCAATAAGCGCCGCTCttattagaatttcaatcctCTG ACCATATGTTGACATTTAGCTAAATCCTGTCTCTTTTTCGTTGTAATAAG GACGTTAAAAGTTAAAACTATCAAAATAATGGAGCATATACAAGCTCTTA GcttaaaaatagaaagaaaatcCATAGTTCTGTATTTATTTGAACATTTA AAGTCCTCAGCGGAGAAGAAATTTGTCAGTGGACTACGGGAGAATCTCTT AACCCAACGAGAAGAAAACATTTGATCGTTAGCTGTAACTTCGTTGCAAG ATTATAATTTATATGTGatactttttctattttttcttagaTGGTCACTT CGTGCCAGTCGGTGAAGATGGGTGCACTCATTTAGTGATCGAAGAATCTT ATTCTTTGGATTTGACTACTGAATCTGTCAAAGCTACTTTCGTCGTCAAA CAAGAGGTTTTTTTCCCTTGCTTATTTCGTCAGTACTATAAATATCCTTT GATGTACAGTATTGTATTGTCCTCTTCATGCAAATTGTTCATTCTTTAAA ATGATTCCTTAAATGATTCTTTTAGTGGTTTTGGGCAAGTATTCAACTGG ATGTATGCGCTGAAGAAAACATGTACTCGTACATCGACGTAAGTTCACTC TCCTATTtacttttttcataatttggaaaaaagattttcaagattCCGAA ATGTAGATGTATTTTAGAGCTATTTTATTTGTATCAGCTTTTTTGTCGAC GGAAATGATTCTTTTTATGCTAATTCCTCTTATTTCAGGACAAAGGCACG CCTCTTGGAACTGGTAGTCAACGACGCTTCAAGAGAAAACATTGCAACAT GTCAGGGTTAAGTGATCTCTTGTCGCCCGGCTCGCCCTTCTTTATCTCCA ACAAGCGTCAAAGTCGTGATGGAGCCCTTTCTTCTCTTTCCTCTGCTACC TTTGATTCGTCCATGGGTTCCCCTCTCGCTATGATCGACTCCCCTATCGT TAAAGAAACCAAAAAAGAGATTTCAGCTCGTCAACAAAAATGCTTGGAAC TTCAGCATACCGAACGAAATTATGTTACCATACTACAAACTATCATCAAG GTACTTTCTTTCGTTGTTTCTCTCTTTCAAAAATCTGCTGTCTCTGAAAC CACGTTGGGACCAGGGTAGTCTCGCGTTGCAAGACTAGAATTAATCGTTT GAAATCTTTGGTTGAAGTTTAGTGTTCTTTGGTCTGCTAACTGTCATact caattttctttcttttaggtCTTCAAAGAACCTCTTGAACAATCAGCAAA CCAAAGAGGCGGTGCCCTGCTAGCTTctgaagaaatcaaaacaattttcg gTGCCATTCCTGATTTGCTTGATGTCCATGAAAAATTATTTGTAAGACTT CATTAAATCAAAATAATGGATGCAGTTTAGTGTACTTCGTTTCTTTCTTT AGTTGTCTCATCGTCTCTCAAAAGTCTCTTTTAACATAACTATACCGCTT TTCTACCTACCTAACtttaaaagtcacaaaatcaaACCGTTAGTGGAACG AATTTAAGGCAACATTTTTGTCACGAACTGATCGCCTTTTCTCGTCTTCA ATTTCTTATTACAGGCTTCAATAAACCATTTGGTGGACAATTGGCACGAA GAACAACTCATTGGAAAAGCTATCACCGATTGTGTAAGTGCTCTTTTCAA TTGCGTCCATGTTTCGAAGCTACCCTGTTAATTTTGCCAGTGACATGATC TTATTTCAAATTTGGTGTTTTCTCTAATATTTCAGGCGGAAGGTATGATG AAAGCTTATCCAGGATtcgtcaattattttgaattcattAAAGAAACCAT CAACAGATGTGACAAAGAACGACCTCGATTTCATGCTTTCCTCAAGGTAA CTACAACTCTAAATCAAGTTGATAATGATCGATGATGACTTGAATTTCTT GATTCGATAtgagtttttggacctaccccggtggggtggaggtcctataa attcacctctgtccgtccgtccgttcgttaccagcttttctcgagattga atcataggaatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNTTgttcatgagggcttacttttgaaaaatatgt gtgtttagacatgaaattttggttgcttggcgtgtttttatagaaaaact ggccaagttcaatattttttataagcacattatcNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNag gtattagcttttctcgagattggctctttcattctttaagactttttgca caaagatgcataactataaaccctcgaatgtgatggagcccaattttcga gaaaaaaaatgtttttgggcaaatttgggccaaaaaacggctaaaaagcg gggtttttggactttgtaaaaaaatggatcattgattttttctgattttt tgcatgaaagtagggtaccgtcataggtaaaagatggctcaagcagattt ttgcaaaaaaatttatttggcttaaaaaacgcatgtttatctataagaat cactgttaataagcatacatcaatgttcttagtcaaattactcaatttct ttatgagatagatgtctttttttgctcacgagggttTACTTTTGAAGtat atatgtgtttagacatgaaattttggttgcttggcgtgtttttatagaga gTGGCCAaactcgatatttttttataagcacattatcaattattagcttt tctcgggattggcgctttcattctttatgattttttgcacaaagatgcat aattataaaccctcgaatgtgacttagcccgattttcgaaaaaaaatgtt tttgggcaaatttgggccaaaaaacggctaaaaaaagggttttttggaca ttgtgaaatattggatcgttgttttttttctgatttttttgcatgaacgt aggtaaaagatgggtcaagcagatttttgtaaaaaaacttttcagctcaa aaaacgcatctttatctataagaatcactattaataagcatacatcaatg ttctTAGCCAAATTACTCAATTTTTTGATGAGATAGATGTCTTTCTATGC TCACGAAGTcatgaatatgaaagaatatttcacgagcatgaaattttggt ttctaaacgtttttttataagaaacaaacgactaattttaataaatcgtc actatttgtgttctgaatgattgtNatgctcacgtagatatcaattatat atgtgttaaatgcataaccaggtaggtccataaaagtatcacttgtttta tataagaaacaAAGAGAAAAGTCTTTTCAATAGTTTGCCCAATTAATCGG TGCCCATCATTTTGTCTTTGCAGTTGAGCATGACGAACCCTGACTGCCAG CGTCAAACGTTGACAGAATTATTGATCCGACCCGTTCAAAGGTTGCCCTC CATGAgcttgttgatggatggtgagTGAAAGAATGCACTATTCCCAATAC ATTACAATGTTTTTGAACACGTTTTCGAACACAAAGTAATCAAAAGAAAT GCATTAAACATAGGCATATTAATGTCTGAGTAAAATTATGTCTTAATAAA TGCGGCATTAAAATCATCATTGATATATTGTAATCATGTTTAACTGCAAG CTGTTGAATTGTTACTCCCCTTAACCTCATCTTTCCTTCAACTTAGACAT CTTCAAACACACGAAAGAAAACAACCCTGATCATGCTTATGTCAATGATG CCAGAGCTGCCGTCAAGAAAGTACTGACGTAAGAAAATCTTCCCTTTATA TCCAGTAATGTATTCGATTTTTAATCCTCTCCTAATGCGATGATGTTTTT CCATACAATGAGCTGTTTTTTTATCTAAGGTTTATCAATGAAGACAAACG GAAGACAGAAACACAAGTGCAAATGTTTGAAATTCTCggagaaattgaaa attgcccGGTAAGAATGAATATTGGCCATTTAGTGATTAGATAAGTAGTT GAAGAGTGTCAATTCATCATTTTCACTTGGTAACTTATCAATTCATTCAC CGTTCCCTTTCAGCCATATTTATTGTCGGCGAAAAGAAGTTTGATATCAA AAGTGGACTTGATGGAAGTAACGGAAGGATTGATACTGAAGTGCGAACAC CTAACCATGTTTCTCTTCAATGACTGTATCGAGGTAAAGTAGCTACGTTG TTCGCTCTTTATTTTTGACATGTTCACTGCTTAGATCTCCAATCAAGAAA TCGGTATCACAAACAAGAAGTTTGAAACAAGAAGTAttccctttcttttt tattgttttatgtCTTTTATCACTTCTGATCGGGTTTATatcgattttat tttatttattttattatgcAGATCGCAAAGAAGAAGAATCGTGGAGTGAA CTCGATGACGTACAAAAGCCCTGCTATCCAGAACATCCAGCGTGGTAATG TGCAAAAGAAGTCGTACGATCACATGGAATTCATCGAAGCACGTCACCTC AAACATGTTGTGGACATCAAGGATGACACTGGTATGATACTTTTCGGTTT TGGCGCGTGGAGAAAAATAAATGACCTAAAATCTGCCTTCGTTGGAGTTT ATCATCTTACTCCTTCGTATTTCCCGGTCCACTTTGTACTAATTGAGATA TAGCTTATCCTGATACCTAATTTTGTTTTGCTCCTTTATCTTGAAGTTTT TCACACTCTTTCAATCTCTTCAGATTTCAAGGAGATGTTTGGTCTGATCC ACCTTTCCAACATCACGCAAGCCGACCAACTCAGCATCTTCAAGATGGTG CCAGGAACCACAAAAGCTGAATGGATCAACAAGGTCGTCCAACGCTTGAA AAGCAGCAAAGCTACCGCAGATGCCGTGAGTTCAACAATATACGTTTAAT TTAAATGATGAAGAAACGTGATTTGATTCAAAACTCTGATTCGCATTTGC AATAACTCTATTCGCGTAATTCAcgtaggaaaagaaaaatagagagAGTC ATTTCAAATCCACTTTCTTCTTTCAGGAGAATTTATTGATGGGAGTGGAA CCATGGGAGCTGTTGTCTGACAAAAGCGATACCAGTCAAGAGAAAGAAAG ATCTGGATCTTTGAGCAAAGTGTTCAAGTAAGCAACATTAACTATCTTCT AGTTGTTTTGGTTTAATAGTAGGAGACCATGCTTTATCGGCACCGTGAAG TCTTTTCATTTCATCCTTTTAGTATGCAACcacataaatttgaaaatgac atCAAATTCATTTACTTTCAAAAGAAGTTGATTTGATTACTTCACCTTTT TAAGAAGATTTCTCCCTCTAATGCTATGATAAAATCATCTTTATACAAGG GAAAACCCTCGAAAAGATCAATCCCTTCTAAAATCTACTGATTATTTTGA ATACCAAAAAAGTGTATACGTAGAAGACATGAactttctcttttctttct tcACAGGAAAGCGAAGAGTGGCATCACGAAGAAGGTAGTGCGTGCTTTAT CGCAAAACAAAACACCGAAGAGCCACAACAAATCCACCTTGCGAAGAGCA ATGGCCAAGTAAGTGTGCCTTCGTTCAACACCACTCTCCTCTACTTTTCC TCCATTCACATTCTTTGCTTTCTTGCTTTTTCCGGGTAAGCTTTTTAATT AAATCCACCTGACTTTTGTCCAATAGCACAATGACGTCCACGAATAAAGG GTTCCGTTCAACGTTCAATtcataaacattttttattttgttagtGTGAC GCCGAATACCTATCCATCAACACCCGGCAATACATCAGGCTTGGTCAGCC CTACGCCAAGCGAATACACTATCATGGATTTCTCTGTTTGCGAAGAAAAG GTACAGCGatgttcaattttttcgctACTGCAAGATGTTCGAAgttttaa agtgacgtcaaaaatcgTCACGTGACTTTTACAGTAGTTGATTGCTTACA AGTGACATGCTGGGAAGAGAGTAGAAAGCAAAGCAGAAAATCAGAAACAA GGGTTGTGCTATGCNATGACTTGCTGGGAAGAGAGTAGAAAGCAAAGCAG AAAATCAGAAACAAGGGTTATGCTATGCGATACAAGCACATTATTATTCT TTCTGTAATGCTTACAATtaagttttcccgatttttaagCTAACCATTCA TAATTTAGTTTGCATTAGCCGCCAGAAAGGAGTAAACATCTTAGGCCCTG GCTTGTGATCATTAACTTCTTGATTTTTAGTGATCACTGGGAAAGAAATG TGAAATCTTGAATCTTTTGCATACTTCTCACCCGATCCGATTGCAACAGA CTGGTCGTCGTTGTCGTACATTCGAAAGATGTATCCTTTTCTCTATTGGA CCAATGGATGGTAACATTGCTGTCACGTGATGTTCACCATGAAGCTCCGC TGTGGAAGACAACTTTCTTGACAAAAAATGAAACTCATTTAAAATGAAGA agataatatatatttttaattttagtcGACAAAAATTTCCAGCTTTCGAT CTTAATGTTACGGATAGTATATGATGGTTGTGTTTTCGCTATATTTCACA TGCTTATTGATCGTTATGTAAGTAGCTTGGATTTCAATGTGTAGTCCGTT AAACTTTACGATATTGATGATGACCTTTTTGCTCTTTTCAAATTTAGTCT TGTTCAGCAtttcttttcgattttttaatgATACTATTACCATATATAAA TAATATTTTAGTAACATTTATTTAAGTTGTACTATAGCTTTTTATTGTAA AACCGCTCTCCATTATCTCACGCATGACGTAAATGTTTGTGAGGGTGACT CTGAGACAGTTTCCGTTTTCTTTTATTCttcttctgttctttttttttca cataaCAAACAAATAGATAAAAAGTGTATAATATTTTAAAGCAGTAATAT TTTAAGAAGTTGTACGAGGTATCAACGAAAAGTGTATGTTTTTATGAAAC ATGAAATACAAACTTCTAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00050382TCONS_00050382Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00050382-proteinTCONS_00050382-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_17supercontigscaffold_17:159442..169311 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
ECT2PREDICTED: protein ECT2 isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
26.91 24.18 31.52 29.43 93.67 73.36 44.16 46.19 29.92 41.57 29.2 21.62 14.74 13.58 25.99 33.55 60.94 47.54 7.79 9.6 19.92 18.83 39.02 35.29 64.04 63.39 14.26 8.17 29.09 28.82