XLOC_031926 (gene) - C. hemisphaerica

Overview
NameXLOC_031926
Unique NameXLOC_031926
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_171:170016..174490+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031926 ID=XLOC_031926|Name=XLOC_031926|organism=Clytia hemisphaerica|type=gene|length=4475bp|location=Sequence derived from alignment at scaffold_171:170016..174490+ (Clytia hemisphaerica)
CACTGTTTTCCCGGAATTCCCTTTTGTGATTATTCATTTGAGGAGTTTTT
GTCAATCATGTCTACAATAATTGTCATATTGTTCGTTTGTGTGCAAGCCA
TCATTTTGAATTCTTTAAACTGGAACCCATCAGTTTTGCAATGAAATTCT
TGAAACTGGAACCCATCAGCTTTGCAATGGAATTCTTGAAACTGGAACCC
ATCAGCTTTGCAATGGAATAGTATCAATATGAAGCGTGGAATCCGTATAT
ATCTATCCTGATCATTTTATGTTTACGTGGTAGAGGTTGTTTGTGGTTTA
GTTCTTTATCCTTCAGAATGGCATACTTTTATTTGGCACTGTTTTCCCGG
AATTCCCTTTTGTGATTATTCATTTGGGGAGTTTTTGTCAATGATGTCTA
CAATAATTGTCATATTGTTTGTTTGTGTGCAAGCCAACATTTTGAATTCT
TGAAACTGGAACCCATCAGTTTTGCAATGGAATTCTTGAAACTGGAACCC
ATCAGCTTTGCAATGGAATTCTTTAAACTGGAACCCATCAGTTTTGCAAT
GGAATTCTTTAAACTGTAACCCATCAGCTTTGCAATGGAATTCTTTAAAC
TGGAACCCATCAGTTTTGCAATGGAATTCTTTAAACTGTAACCCATCAGC
TTTGCAATGGAATTCTTTAAACTGGAACCCATCAGTTTTGCAATGGAATT
CTTTAAACTGTAACCCATCAGCTTTGCAATGGAATTCTTTAAACTGGAAC
CCATCAGTTTTGCAATGGAATTCTTTAAACTGTAACCCATCAGCTTTGCA
ATGGAATTCTTTAAACTGGAACCCATCAGTTTTGCAATGGAATTCTTTAA
ACTGTAACCCATCAGCTTTGCAATGGAATTCTTTAAACTGGAACCCATCA
GTTTTGCAATGGAATTCTTTAAACTGTAACCCATCAGCTTTGCAATGGAA
TTCTTTAAACTGGAACCCATCAGTTTTGCAATGGAATTCTTTAAACTGTA
ACCCATCAGCTTTGCAATGGAATTCTTTAAACTGGAACCCACCAGCTTTG
CAATGGAATTCTTTAAACTGGAACCCATCAGCTTTGCAATGGAATTCTTG
AAACTGGAATTCACCAGCTTTGCAATGGAATTCTTTAAACTGGAACCCAT
CAGCTTTGCAATGGAATTCTTTAAACTGGAACCCATCTGTTTTGCAATGG
AATTCTTGAAACTGGAACCCATCTGTTTTGCAATGGAATTCTTGAAACTG
GAACCCATCTGCTTTGCaatggaattttttaaactGGAACCCATCAGTTT
TGCAATGGAATAATATCAATGTGATAAATAATTCaataaataaaaagtga
aatgttTAAATAATAATCTAAATTTTTGCTTCCAAATATAACAAAAGTTT
GTCTGTGGCTGTAAATATTGTATTTGAGGTGGTTGTTTCTGATGTATATT
TTGGTGGTGAGCATTTTGGTGGCGTGGAATTTGGTGGTGAGCATTTTGGT
GGCGTGGAATTTGGTGGTGAGCATTTTGGTGGCATGGATTTTGGTGGTGA
GCATTTTGGTGGCGTGTCCGGGATTTTCTACATAATgataatgtttttta
tttttttcatttttcttcctaagtttattaactttaaaatttaatttatt
tatctCCTTTTCTTCAATTTAAATTTTGTTATCTTTgcttttgaacattt
tgttaaaatttctagTATCATATTTTGATTTGAGCTCTCTATTTTCTAAA
ACTAGCCTGAGACATCTTCTTTTTAAATAGTGGTTTCTCGATTGAAGGGT
GTAAACTTGACTTCTTAAGCAAAATTCAGAAGTTTTATGAGAATCTGAAC
GCAATGATTTCGCCAGAGTTGGTCAAAACATTTCTCTGCGTGTGCACATA
GGATGTAGGTATTCCGTTCTAATTCtttaattttgtcatccatttgTTGG
TTTTCACTTGCTGGTAGCTTTTTTTTACAGTGTTtggatttttagatttt
taataaATTCTTGACTTTTGCTATCCGATATGATCCTTTTTACCTGTTTT
TCAAAACTTTACCAACagcttgaaaaatgtttctgctttttcttttattt
caaacctttttgttttggtttttgttgCCCACTTCCCAGTCCCCCAAAAA
GAAACTTGGTACTATTTTCATACTGAAAAATATGAGATACTGCATATCAT
TCCTATGCTCACAAAACTGTTATTTTTTGAATCGATATTCAAGAGTACTT
CACATCGTCAATGATTCCAACTATTTCTGCAAAAATCACTTACCATTATT
TTGAACATGCATGATGGACAAGAATGTTGAGACAAAAGCTAATTCTAAGC
TGCTTCTCCCCTTTCCCCCATTTGCAATGTTCATTTCTATTTCCATTTCG
ATGCTTGCATCCTTTCTTCAACATTTTTACTGCAAATTCCtgtgtttttc
tcaaacatttttgtccatgattgcagTTTGGTGTAATATAAAAACAATAG
AAGTTGAAAAGCGATTTAAAAATAAGTAAACTGTAGTAAAACCCTCTTCG
TACCTTCAAGAATTTGTTGTCCATTCATCCATAAGCACAACCTTTGTAGA
CTCAGTGGTCTGTGAATCTGCCTTCTTGAGTGACACCAGCAATGTGTTCG
TCTGAAATGACTTCTAAAAGTAACGAGAACAGCATACCTTGATTAAACAA
ATCTTAAAATACAGGGTGAAAGTTGAGCTCATCAGGAAATGCTAGGATTA
AACTTCAGTACTATTATGGTAAAGAGTAGTTAAGAGTTGGTAACATAATC
TTTTAATTATTGCGGTACCTTTTTTTTGGTGAGGAGATGAATATTGATGA
CTATTGATGTTTAAGATAATATTGGAATCAAatacaatagacgatatcgg
ctttacatgaaaactcagatttgatccccgaatattgcccacaatgcttt
gcgcagAAAAATGTTTAcagtgaaattttttccgcacaaagcattgttgG
GAATTCTCTGGGATCAAATCGGACTTTTCAtgtaaagccgatatcgtcta
ttgactCTTGCTAATTCAAAGTTCTATTAGTCCAAGCTTTCTATAATTCA
ATTGCTAAATTGGCTAAATATACAGATACTTGCAGTACTAAACAGCATAT
GGTTATAAAGTCTAGTGAGTTTTGGAAAATAGCAAATGAGTATAACAAAT
AACAAAAATGTATTATCCTTCAGAATggcattattttttttatttggcac
TGTTTTCCCAGAATTCCTTTTTGTGATTATTCATTTGAGGAGTTTTTGTC
AATGCTGTCCACAATTATAGTTGTCACATTGTTTGTTTGTGTGCAAGCCA
ACATTTCAAATTCTTGAAACTGGAACCCATCAGTTTTGCAACGGAATTCT
TGAAACTGGAACCCATCAGCTTTGTAATGgaataatataaatattattGA
TATTAATGCATTGATATTAATGCGATTGCCATCATGTCAGCCAGTCGGTC
AGTATTATTAGCTTGCTTAACCTTTGCTAAATAAATACACTTGCAGTACC
AAACAGCATATGGCCAAAGTATANGTCAGCCAGTCGGTCGGTATTATTAG
CTTGCTTAACCTTTGCTAAATAAATAAACTTGCAGTACCAAACAGCATAT
GGCTAAAGTATAGTGAGTTTTGAAAAAGagtaaattgaaaaagtttatat
aaaaaatgtattataccTTTTCGTCGACTTTGTGCATCAATAATCCATTC
TGGATCCTGCAGGTCTTTGCCTTGTTTTTAATCtttcttagatatttttc
acatttattgTCTAAGTTTTCCCCCTTCAAAGATTTGATAACATCACGAT
AAAGCTCCTCTGTGAATATTGTTTTAGTATGTTGTTCTTTTAGATATTCA
TTGAATGCATCCATCAGTCAGGATTTTGATTAATATCTTGGCTTTTGCTC
TATTCTATGGTTCAATAATTACACCATCCTCACTCATCCGGACTCATGCA
TCTTCTTTCAGAACAGGATTCTCTTTGCTGTAAATGTAATGTAACCAATT
TTCATTGTCAAAAGGGAATACAATATGTTGAATTCCTTGAATaacaaaaa
atgttgataaatcTCTCACTAATCTTTCAgtgttggaaaaaatctcaagc
TCTTCAATCCTATTTCTATAATAAAGTTGCTATTTCAAATATGAGACCAT
TATTGCCTTTCCACCTGTTTCCACAGGATTCAAATGTCtacgaaaacaaa
aaaagagacAATTAGCTTACATAAATTCTACAATTATATGACCACTTAAA
GTATTATgttttaaaagaaatattttaaaatcacCATATTTATATCTGTC
GAAATTTCTAGGATGATTCTTTAAGAAAGATTTTCAGTCTGTAAATATTt
agttttttaactttttatgaCGCACATTATTTAATTCCTAtgataatttt
catattttttgacAAGACTTTTGTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00050420TCONS_00050420Clytia hemisphaericatranscript
TCONS_00050421TCONS_00050421Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00050421-proteinTCONS_00050421-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_171supercontigscaffold_171:170016..174490 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.23	0.28	0.12	0.13	3.17	2.34	4.05	4.11	2.57	2.47	4.05	2.53	1.89	2	0.21	0.39	0.4	0.17	0.36	0.43	0.54	0.41	0.12	0.25	4.8	5.72	0.77	0.66	0.43	0.31