XLOC_031956 (gene) - C. hemisphaerica

Overview
NameXLOC_031956
Unique NameXLOC_031956
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_172:18733..27829-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031956 ID=XLOC_031956|Name=XLOC_031956|organism=Clytia hemisphaerica|type=gene|length=9097bp|location=Sequence derived from alignment at scaffold_172:18733..27829- (Clytia hemisphaerica)
ATGTTGAAGTATTACATGATAGGGTATAAAAGAGACAAAAGGGCGAATGT CAGTTAGTAAAAGAACTCATGCTAATGTCATTGCGAGTGAGACCAACATT TTCAGTTGTTAAACACAAGTGATCAAGTTGTTAACTGGCTGAGATCTTTA TATGTATGTCATTTCCTTTGTAGCGGATCTCCATACAATTTTTATACATT ACATGTGAAATAATTATACAAAACCACGGCAAAACGAGGAGAAGCAATTC GTTTAGTCGATTTATCACGCTCACTTCAATCTTTAAGTGGTCCTTAATAG CATTGAGTAGTCTACGCATATTTTTGGCAACAGCACTCTGGCGCGTATAA GTGGAAGGATGGCATTTATATTGTAAAATTATATTTCGTTGTTTTGGAGG CTTTTTATTTTTATTGGGAGCCGTTTGTGCAGAATATTTTCTACAAGATG GGTACATCAGATAGTGAGATGTTGTATCATATTTGTGGAAGGATAGCTTA TCCGGTGAAGGTAACCATTTAATAAACTCAGTCTTTTTAAGGCTTATTTT GCTAATCGGAATAACGTATGTTTCACTGAAATGACCCGTGAAACGATCAA AATTCCCTGAGGAAAATTGGTCACAGTTGGGAATACTACAGTTGCAGTTG TACTGTACACGTTTTTTTTTTTTATAAGAACAAACTATATAAGAACATAA GGCTTCGAGGCCCAAAAATTTAAGAACATTCTAAGAACATTCTAAGGCTT TGGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAATAAGAACATTTT AAGAACATTTTTAGGCTTCAAATCCAAAAAACTAAGAACATCCGAAGGCT TCGAAAATTTTTGACGTTCTTATGAAAAAAAAAACGTGTACTAGATAAAA TTGTGCATGCAATTTTCGGGGCGAGAGTAAATCTGGAATTTACGAGGAGG AAACTGAGAGTAAAGATTGATGAGCCACGGGTTGAGGAAATTTAGGTATG AACCCACTTGGGAGGTTTTCATCCATTGTGAATTTGTGAATTTGAGATAT GTAGGTGAAAAGACGGACGCGCAACATTTAGTTGATCTAAAGCTATTCTC ACGCATCCTTGAATCACATACAAAAATTCCAGAAACATTATTCAGGCTAT TCAAAGTGCATTTTCGATCTGTTAATGTAATGAGAAGGATAATTAGAAAA CCATCAATATAATTCATCCTTAGAAAAACTCATCGAAAAGCTCGTGATCG ATACATCTCTAAACAATTAATAAATTTCAAGTGTAGAAGGCATGCTATCA AAAGCTATTAAGTTAGATCCAGCCAACTCGTTAAAAGTAATTGGAAAGTA TCATTAAATCAGACCACTGTTAAATACATCTGTTTCTTGTAGAAATTCTT TCCAATCATTTCCGTAACTTTAGAACTTTAACTGATGACCATTACATAGT ATAAAGTTCCCGTTAAAACTTATCAACACCCCTGTCTCACAGCCCTGGTG AAACTTTTTCCTACAGCGGGCGTAAAAGTTTCGATTGAAATCTCAATGGG GATAAAAAATCTATTGTTCCAAGATTAAAAAATCCAGTGGGAATGGTTTT GGAGTGCTATTTCTATAAACAATGAATTTCGAATGTGGATGAAATCAAAG TCAATTTCTCAGTGGGGCTGAAATTCAAGGGTATTTTTCCCACCGGGGAC AAAATTTTTGCCAAATTTTCCAGTGGGGCTGGGGCCCCAGCGGGTCTGTA ACACAGGGATGCTTATCAATACAACAGATTCCCACTAACCTTTGAGCCTA GTGATTGCGAGAGATTGACATTCTTTGTTTCTTGATTGACGTGGTATAGA TAATTCCCAAAATTCATTACGCCTAATAAAAAAAATACTTTATTGAGATT TCTAACCCAATAAAAATACGTACACAAAAAACTATGCTCTCCTGGCGACC AAATTTGCTGTTGAAGCCATCGCCATCATAAAAATCCGAAAGATTGGATT AAGAAAACGAGTTTTCGTCGCCAGAGATTTCTGGGCTAATATTAATGTCA CAAGCTAGATAACAGTAGTTTAAATGGCAGACCTCTACATCCAACATTGG AAAATCATGTTCGATGAATTGTTTTTTTTCAAAGAAAAAAATAATTCTGG CAAAGAAATAAATATGTATTTTTTATGAAAAATTATTCGTTGTGTATTTT GAAGGAAAACAATTTGCGTTCTTTCCACAAGGAAAGTAATTTTTGTGCTT TAAAAGGAAAAATAATAGGTCCTAATTTTTAAGAAAAATTTATGAAAAGA ATTAGTGAATTTTCAAAGGAAAATACTTTGTGTGTATTTCGGTGTATTTT CAAAGGAAAAAAGTATATGCTTGAAAATGCTTGGTGTGTATTTTGCGAGG AAAAACAAATTTCAGTGCTGTTTGAGCTTTAAAAGAAAATGCTCAGTGTG AATTGTTGAAGGAACATAATTCGAATATTTTTCAATGAAAAACACAATAA TTTGTGTGTATTTTTCGAGGAAATGAAATGTGTACTTTTAGTACGCTGAG TATCAGCAGAGGCCGAGTATAGAATCTCGATTGGTCGTCACAGGTCGGAA TATGATTTCGGCATGTGCTTTTAGTGGAAAATGCTGTAAATATTTATTTG GAACGAAAGCTAAAAGTCTTTTGCTCGTATAGAAGGAAATTTTTCATACT CAATTACTTTCCTGTTTTGTTTTTGCAAGCAAAATCGGTAAAATCATGCT CGCGTGAGTAGTTATTTGCAGTGAAAACACTTGAGTGTGATGATACTTCA TTTTTTGAGAGAAATAACCCTACATTTTCTTTCAAAACATCTTACTGAAC AAATCAAACATTTGATATCAAATATCACTTCAAAAAACCTCAAAACTATT AATATTTAATTTGATCTCAATAGCTTTTTGTTTAATCTGTTTGGAATGAT AATAAATAGCCAATTTTCTCCTTTTTCTCTTGCCGGGTGTCGTGGCGTGC ATCTGTAATCCAGCTACTAGGAGGCTAAACTCTCGGACGGCTTGAGTTCG GGACCACTATCGTGCAGTTGTCTATGTCGATCAGGCGTCCACACTAAGCT CAGTGTCAACATGGTTATCATGCAGGAATGCGAGATATACCAGGTTCGAT AATGAAGAACGTACCGGCCCAGGGCGGAAACGCAGCAGGCAAAAGTTCTC GCAGTGAGCAGTAGTGGGATAGCGCTTGTGAATAGGTGGTGTACGGTAGC CCGTGCAAGACAGTCGAACGAAGCTTTTATTCGATGCAATATTTTATAAC AAATGTATCAATCAGTCAAGAAACGGCAACAATGAAATAGAACAGAACAG AATTTGAAGAATTTCATAATTTTCTTTAAAGTTCAGTACTTATAATAAAT TAGATTTAGTTTTCAAATGTTCATGTCTAAATACGTCGATATCTTTTAAA CGAGGTTCATGGCGCTGTCGACAACATTTTAGAAATTTCTTGAATTTTTG CAGTTTCGACTCTTTAACATCATAAGGTCCTGGACATCTCTTATCAAACT TCAAAACTTTTTATTTCTTTCAGGCACAAAATGTGATAAGGTTATAAGAC TATAAGGTAGAACAAAATCTACAGGCCCGGCGAGGAGGGCGAGAAAGTGC CTACTTCGCAACATTAAAAAAGAACGTCGAATTTTAAAAAGAACGACAAA TTTCTGAGCCTTTCAACAAAGCGACTACGAATATAAAACACATAAAACAG CTAGTGTGAAGGTACACGAGAATTTAGAGGACAATAATAGAGGCCCCCCC AGCGGACCCTAAATTCACGCATTCACGCAAAATTTTTTCGCAATTCTCGC ATTCACGCAAGTTTTTCTCGAAATTCACGCAAAACCCGATTTTTTGGGAA ATCGGGGAAATTTTTAGAAAAATCGGGGAAGTTGTCAAACATTTCTACAA ATTTGGGTGAAAAGCCAGTTTGCAGAGTCTGAATTATCAGAGAAGTCGTT TGTTTTTGTTAAGTAGTCGAGAGTGGGGCAGACGTTAGACATTACAATCC ACTATAAATGGTAGAATGCCCTCGTATACGAGGCCCCCCAGTGGAACCAA AATGGCAAGGCTGCTACACTCGAGATATTGTTCGACCGGATCTGGTCATG CACTTGAGAAAAACTTAACTCAGTAGTGATTTTTTCCTGTACACCTGATT ATAAGCACATTAGCTTAAAGCGCTACGTAAGTTTTTAACTTTAATCATAT GCCATCACGCAAAATATTTGATTCTTCTAACATNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGAAAAGGTGAAAC TTCTCCAGTTAAGGTATCGCGATAGTAAGTGAAAAGATATGCGCCGCAGG CGAATTTTTGTACAAAAAATATCTTAATCATTATAAAAAATAGGTCAAAC AAACTCCAGGGTGACACCATAATGCTTAGCTAAGGGGTAAGGAGGCGCAA CCATGGTTTTCGCAGAGAGGAAATTTTTTGCATTTCTGTCACCTCGCGTT TGGATAAAAATGCTATCTTTAACACTATTGAAAAAGAATGTAGTCTAAAT TCGTTAAGAGGCGAGGTACGATCGCTTGATAGTTTGCAAAATGAAGTAAA AGGATGAACATTTGTTGCGAGCGAAGCGAGCAAACAAAAATTTTAATCAG GGCTCGCGTCTTGATTTCCTAACGTGGAGGGGCCGAAAACATAGTGACTA AGGGAGGCGCAACCATGGTTTGCGCCGACGGGTAAAATTTCTATTTTCAC ACTCTGATGTGCTTAAATACGACTCCATTTCAGACTGATTTTGCCAAGAA ATGAGGTTCTCAAAAGTCTGCATCATGGGTATTAAATATTTCTTTGAATT AAAAATTTGTGGTGAGGCCTGACTAAACTATACTTGCACTCGACTTTTGG TGACTGCTGCACTCAAAATCTCGAACAAACGTGCCACGTTCTGCAAACTG GGTGAAAAGGGAAATTCCCCGAGTTCACGTAAAAAACAGGGCAGATTCAC GCATTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN CGCATTCACGCAATTTTTTTTCAATTTTCACGCATTCACGCAACCAAAAA AGCCCATTCACGCATTCACGCAAACCGCTGGGGGGGGCCCATAATAAAAA CCCCATACTCTAGTGGACATAAGCGGTGACCCCTCGGTGACCCCGATCAC ACCGTTACGCTTAGACTAGCAAGCGTCTGCCTTTCCTTTTATCTGACACC CAGGTGCAGAAATTTCATCGGGTGAGCTAATGCTATCTGGAAGGTTTAGA TTACGGAGTTTTGCAAACCGCGTCAAGGATTTTGCAGCGGGAGGCTCGGT AACCACGCCTTCGTTTTCGGGGATTGGCTACCGTGAGCACAGGCCGATAT CATATATTGACCTGTGCCGACCACCATCCAAGATCTTGGATGAAGTTCAA AGTTGATATTTTTATTCCCGTAGTTGAAAACACAACTCAAAAATGTCATC AATGCTTTTTAAAAAGAGTCAGTGATAGAGAATCGTAACATAAAGTCTGT CTATCATTTCGATTCAATTAAAGTAACATTTCAATAATTGATAGTTTAGT AATTACTGTTATACATTTGGGAATCATGTAAAAGATTTCTTTCGAGAGAA ACTCATTTCAATTACACTTGGAGGTTTCTGGGGAATTCGTAAATAGTAAA CTACATACTGCAATACAGTCTGCTAGACATTAATATGGTAATATTTGCTC TTTTCATCTTTGATTATTTCTAGAGTGATTAGATTGACACATGCGCGATA GAATTTCTATTATTGGTCTTCAGAGGTTGATATATTCCCCGGGGGGGGGG GGGCNGAAGAACCAATATACTTTTGGAGATCAAGAAATTAATGATGAAAA AAGAAAAAAGAAAAAAAATATAAACTTTCCGTGTACCAGGAATGCGGGAA AAGTGCTTGCCGCGTGAGAGTGGTTTGGAAAGCCACTAGTTGTATGTATT CAGTGAACGTAGCGAGCCCATTGCAAACTAGGCTTCTGTATACTCCAGCT TCTTATAGAGGAAGTATATCTTTAAATATTTCTATGCAAGCGTAAGCTAC ATTGAACTACAACGACGTGGTTTACTAGGCTACATCACGCCGAAAAAAAT GTCTTTTCACCCCATCAAACCAAAACAATTCTCTAGTCAAACACTTGGCT GCACGCACCCTCTCTGGCGTTTAGATATAAAGCCTAGTCAATCACTCACT GGGTCAATCAAGCATCACGCTTAACTCATACTGTACCGGGAGTAACGCCA AAAATAGGCCGAACCACGGAGAGGGAGAGCCTTGTAAGGGACTACAGTTT TGTAAAGACAATATATCAGATACATGCACTTTACGGTTTCCCCTTACCTA TTCCGACAAAACATTTTGATATTCTGCATTTCAGCCTCCAGTTGGAACAG TTCGACTCGTATTTTTCCGTTCTTTTACAATCCTCTTCACATTGCTAACG TTGATCTTAACATATTTATCATTGGTGTTACAACCATGGAAAATCGAATC TGTGGGCGAACGTGCTTTAGAATTTGGTGTTTGGCAGATCTGTAAATTTG ACTTCGATGATCCGCCCATTATTCAATGTTTCACAAAGTTTTACCAAGAC GCTGAAGAAGATAGTAAGTACAAATTCTTTTTAAAAAAAATATGGGAATA AGAAATCACCCGAAATCAACATCAATCTCGCTTTTGGAAACGGCAGCCTC TCTCTCATACGAATCCAACTTCATAAAAAATAATTTTCCTAGTAAATATT AAATCAAAAGAAGCCAGGATTTGAGCTGCGATTATATCACCAGGCTTTCC CTCACAAGCTAAGTATTTGAAAAAACTACTTTCTGAACTGAAGAAGTGAT GAATTAGGGGATGAACACGATTCTCGATGATTTTAATTTTTCAGTGTGGT TTCAAGCGTTTCGGTACATGATGCTGACTGGCGCGATTATTCAATTGGTC AATCTAATAGCCATGATTGCACTCACCACGTTTAAATCTGACAAATTTAA AAAGCCATGGCCACTCTTCTCATATGGATTTCTAATAGCAGGTAAGAGAT TAACAACATTAGTTGTCGTAAAGAAAACAACGCAACAGTATATTTGAGGC GAATTTCCGGTTAATTTGAGGAATTCTGATTTCCTGAAAAAGAAGGTGGT AGGTGGTTAAGGTTGAGGCGCCATCTTCAGATCAAAAAAATATAAAATAG ATGATTTACTATTTAATAGATCAGATTTACAAAATGATAGAAAGCAGTCT TTCTTGGATTGAATATTGAATTACCCCATAGCGAGGCAGACATTGATGAT TTCTATTGAGGCCATTTTTGAGGCCGTGGCCAGTGGATTGCAAAAGTTTC AAAACACTCGTTTATTATCATCCCATCTAGGTGCGTTATCCTTTGTTGCA TTGGTTTTGTTCGACATTGAGTTCGAATTTGCGTTCGCAGAAGACGCTCG CGTTCTCATGGATTGGACAGAAGAAACTGACATAGAAGAAAAATTAGGGT GAGTTTTAATTGATTCTTACTCTCTTTTCCTTGATTTCCCAGAGACTTAT GGAAGGTCGAATAAGTGAGGTTTTCCAATATAGTTTTTCATTGGAAGAAA TAGAATCTTTTTATAAATTACATATGTGGAAAATCATTCATTCATCCTAT TCTTCTCCAAAAACAACAAACTTTTTCCGTTGAAGAGAAAAGAAACATCA GTTTTAATTGACATGTGCATTTGATTGACAGTTGCTTCCTTTGATTGACG TATGAGTTTTGATTGACAGATGAGTACTTTGATTGACAGTTATGACTAGA ACATTGAAATAATCAAAACACGATTTGCAATATAAATTACCAAATCTATA ATACCTTACAGCCTCGACAAATCTAATCGCACCATATCTCCTTTTCCTTT CCCTTCTAGATATGTGTATATTTTAGCCTGGCCGACAGTCGGTTTGGTCT GGATCAACAGTTATTTATGCTACTACACAAAATGCATCGAAGATAATTAC AACGAACGAGGAATACACTTCAAACTGTTAGAAAATAGACAACTACGGAA AGACCATAATACTGGATTTCTAGAAAACGGAAATGAAAATAATAACGGAC ATCTATAGTGTCGATGGTGTATAGTGCATAAGTATGGGTTTTTCTATTGT TGCAGCAAATAATTATCCATCAGAGATGATAAATGTGATTTGGATGAATG ATCTAAAGAGACATTGAAACTCCCTGTTTTCTAGGCGCGCATCCAGATGA TTCCAACTTTCATAACATAAATGGTGATGGACCAAATTCTTAAACAGGTG AATTAAAAATACTTCAAATATGTACAATAAAGTATGTAGGTACAATAAAG TATGGAAGTATATTATAGTTGTACGAAACAAGATATTCCTTGAAAGTAGC GTTTATTTTTTTCATTTTATAACTACATGTAGCTTTTGTAAAAATTCTAT TCGTTTTCAGAATACTGACTCATACAAATTCTTAATTAAAGACATACATA TTTTACAGTCTCCAAGCGTTGAAAACAAATGAAGGAGTGGTCGATTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00050461TCONS_00050461Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
Putative cnidarian restricted proteinTCONS_00050461-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_172supercontigscaffold_172:18733..27829 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.18 4.2 2.47 2.52 1.64 1.32 0.25 0.39 2 1.96 0.6 1.58 2.91 2.55 5.24 3.58 17.93 21.18 2.74 1.98 15.37 14.54 3.24 3.87 2.92 4.25 4.01 2.54 0.16 0.64