XLOC_032240 (gene) - C. hemisphaerica

Overview
NameXLOC_032240
Unique NameXLOC_032240
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_19:111275..120107+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032240 ID=XLOC_032240|Name=XLOC_032240|organism=Clytia hemisphaerica|type=gene|length=8833bp|location=Sequence derived from alignment at scaffold_19:111275..120107+ (Clytia hemisphaerica)
gtttttttaatttttcttatcactgttttgatgctggagtttttaaaaat tattcaatatgaCATCCTAACTAGCAAAGATATTATGCTATATGATATAA TTAAAAAGTCATATGACAATAAAATTTTGAGTATGAAAAATTAAGGAATG TTTGCCCCTCAATCTTAATTGATTGCCTACTTAATTTCATTTAGGGATGA CCAGTGACTTGTAGGTACAACTTCAAGTAACACGTTTGGTTACTTTTAAT AAGTATAATTTTTTACAGAttataaataaatcaaaattggaaatatttgA TGACAATAATACACAACTAACCAACATGGATAAAGCTGAAGCGGCAGCAA AACGTGTTGTTATTGATTGTAAGTTAGCAAGTTTGCTCACAAATGTTTCA CAAAAAATGGTtttccttttcaataaaaaaaatatgctaCCTTCTAGCTT AACTaaatttctcaagattttaCACGCTGCAaaggttttcctttttttga atattttttacttgaagGAGAAAAGAtaatatcatgaaaattttgtgCAC TTCAACTTTTGTCAATTGTTATATTCATTCGGACCAAAAGAATCCTTGTG CTTTTTTTCAGGCACAGGAAAGATTCCAGAGGTAGATTTACCAGAAGGTT GGATAGCTTTGGCTCATCAATCTGGTGGTATCGTTTACATTCATACTGAA ACGAGGGTGGTGACATGGTCAAGACCGTACCTCATACACAGGACTGCAAG TGTTAGAGTAAGAATTGTCATCTTGCCTCTCCGCTTAATTCCAAAATTTG TGTCTTTGAAATAAAACCAcgtttcatttttttatcatatGGAAATCATT TCCTACAGGAGGAAACCCAATTTTGATAGCTCTAATGATTCCATAGATTA TTCAAATAGATTAATTTCGCAATAAAATATGCAGGGCACTGATTTCAACG TTAATAATNggcattttctggccttttcaggcctataaatatgtcaaaac tattgcaaatcttatttttttcatttgctgtactaaactttatgaagaaa caacaaaataatcacattgggttgaaaattgtgcccattggagcccCAAA AGAGCCGTTTTAAGCCAATtttgggtagcaaaatgctttttaaggccaat tttgcaagttcataaactttaaactgattaaatcacatgtctgaaatttt cagagatggaagtatTCAAAacagtctttaagcaaaatgaatttcaggtt tttcacttttttcaaaaattcataatggcgtcttcaaaaaatcacttttt agcaaaaaaaatcatatttatcaaaaaatagcattttttaaggcaagctt ctaaaaactgagtttaaaaaaaatgctgactggaattttttatgcagtga tagtattctggagatactccagggaaatcaaaatcatttgggtctgggat gcgtctatgtccgccattatggaaataaaatcccagctaagagccatttt tcaggcaaaaacccaaatttaaactgaaaaaatctctaaaatgacaatag acatggacccGAATTTTcctgcagtgatagtattctgggaatactgcagg aaaatcaaaatcatctgggtttgggatttgggtatatccaccattttgga attgaaattcctgctaaaacgcaatatttcaagcaaaaatcccatttttg actggaaaaatcttgaaaatggcAACatacatgaacctaaaatctttttg cagtgatagccttctggaaatactccagggaaatcaaaatcctttgggtt taggataagggtatgtccgccattatggaattgaaNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtgtgctaaaact ggctaaaatgcaacatttcaagcaaaaaccccatttttgactaaaaactg ctctgaaatggcaatagacatggacccaaatttctttGTAGTGATAATAT TCTGTGAATTCTCCtgggaaaacaaaatcatttgagtctgggatttgttt acatccaccattatggaaatgaaGTCTCTGTTAAAATGCTACATATTTCC ATCCAATTCGTCATaattgactaaatattttgtatattatgTTACATTTA acaaagaatatgaatttacaatcctctaatttagaaatactagtTGAAAC AAATTATAGCAAAAATTCTATTCCACTCAACAATTCTTTATAGCCCACAT ACATTTCCATTCTCAAGACTTGTTCCatcaaaaaaaagattggattttgg catgaaatattatatacattttaaaactggcaTCAATTCAAAAATTGTTG TCCCAGAGACATCTTATACCTAAATAGTTTTTAGGCCTGGAGTATTTACA GAAcaatatcactgcaaaaagattatGGGCCCAAAACTATTGCCATTCTA GAAaggtttttagtcaaaaattgggtttttgcttgagatgttgcatttta gccagttctagcaggaatttcattttcataatggtggatgtaaacaaatc ccagactcaaatgtatttgttttcccaggagaattcacagaatactatca cttcaaagaaatttgggtccatgtctattgccatttcagagcagttttta gtcaaaaatggggtttttgcttgaaatattgcatttcagccagttttagc acatatttcaattccataatggcggacatacccttatcctaaacccaaag gattttgatttccctggagtatttccagaaggctatcactgcaaaaagat tttaggttcatgtttattgccatttttaagatttttccagtcaaaaatgg gatttttgctagaaatattgcgttttagcaggaatttcaattccaaaatg gtggatatacccaaatcccaaacccagatgattttgattttcctgcagta cttccagaatactatcactgcaagaaaattcgggcccatgtctattgtca ttttagagattttttcagttcaaatttgggtttttgcctgaaaaatggct cttagctaggattttatttccataatggcggacatagacacatcccagac ccaaatgatttttatttccctggagtatctccagaatactatcactgtat aaaaaaattcagtcagcatttaaactcagtttttagaagcttgccttaaa aaatgctattttttgataaatatgatttttttttgctaaaaagcgatctT TGAAGatgccattatgaatttttgaaaaaaatgataaacctgaaattcat tttgcttaaagactttattgaagacttccatctctgaaaatttcagacat gtgatttaatcagttcaaagtttatgaacttgcaaaattggccttaaaaa gcattttgctacccaaaattggcttaaaacggctcgtttagggctccaat gggcacaattttcaacccaatatgattattttgttgtttcttcataaagt ttagtacagtaaatgaaaaaaataagatttgcaatagtttcgNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNAATTCTTCTCTCATTTTCTAGAATCT CTTGTtctttgattcaaatttttaacGACACTACGTTCATAGATCATCTG TATTGATTTAATTTCAGAAACATGATCCACCCTTGATATCAATACCCTGT CTCCACGAGCGGCGCTCAAAAGAAGGAACGACATCAAATAAAACTGAAGG AAAAGAAGATGAAATTATCGTTGAAGATGAGAAAATGAGCTCTATTACTA ACGGTGGTcaacaaaaacgaaaacaaTGTCCAATGCGTCAAGAAGAGGGT ACTGGGGATGAGGAATCATcgaagaaacaaaaattggagAACAGTTTCCC ATCGCCATGTCAAAAGCCTGCGGATGGTGACCTTCAGAAAAACCATGATA TTAGTGTGACTGATTCTATCGGTAGTCAAGACGAGAGTTTAATGGAAACT GAAGACGCTTCTACTAGTCTACCGAGCTCCCAAGAAAGCAATGCAACCAG TCTTGGTGGTGGTGAATCTCAAGAGAGTTCTTCGTCAACGAGAAATAATA AGATGAAGAACGTTTTAAGCGAGTTTGAAACCGTTCATATAGACTCGGTT CATGACTATTTGGGACAATTATTCAAGTTTCGGGACCTTGAAGGGGACGA ATGGAAATTACCCCTTTTCACGGATAAAGCTTTCAACGCTTCTCAAACAT TTCTGGTACCCAAAAAGAAGGAAAGATTCGAAACCAAAGGAAAAACTAAT CTACAGGTGCTGTACGAGTACACACAAAAGGAATCGAAAACAGACAGTAA GGTCGTGTTCAGTAAAATTGAGGCGAAAGGTTTAACGGAATTTTACACAG AAACTGTGATCGGAAACTTGAAGTATGGGATCGGTAAAGGAGATACCTTC AAGATAGCAAAACATGACGCCAGTAAAGTGACTATAGATATTTTGAATCC CAAACTCGTCCCCAAGGAGGATGATGAACCTGAGATCGCTGAAGTTTATC AGGtatctacacatttttttataagcgtaaATAGCGATCCCTTATAACAC TATCAAGGCTCAAACCTTTAAAGAACTTTTAGCAATGGGAATTTGTTTCT ACCTTTGAGCGTTTTTTCTTTCTCTCAGAAGCAATAACCAAGGGACTTTT TAACACATTTTTATCGGTCAAGAACTATATTACTAAGCACGATTTTAGAC GGCCGTCTTTTTGCACTGCCTAGGAGGATAGGCATTATTAGTTAGAGAGG GCTAAAAGAGGATagaaagttggcagttaaaaacTTTGCTAGAAGAAGAT AGAAAGAAGTTATTGCGTTGACGTCAACTTTAGACAGTCAACTTTCTGCc caatttaaattaaaattcagaatgAGCAGTTTGAAAAGTGTACGGACCGT TTAAACCAGAGCTAAGAGCTTTAATAAAATTTCCCTATTTCAGTTTTATG ATGATATATTGATCGACGATGAAAAAGTTGTGGAAAACATGAGCAAGTAT GATACTGACGAGGAGGAGCCTTTGATGATGCCTTATGACATCATGTTACA ACTTCTTGAAAGGTACTCCATTTTTACCCTCTTCTACGGTGATAATTATG ATAGATTTCTTGCTCAAAGAATTTGATTAGAACTTAACGATTCATTCTAC TACTCGAAATCCTTcttgaccaatcagattcaAGTAATTATGTTTAATTT GGTGCTTacattaaaaattatataaatcaTTTCCGATCTTGGAAACCTCT GTAATGTAAATAGGCAGGATTACGTTACAAAAGATGGTGCATTTTTTAGT TATAGGCCAAATCTATCAACCATATCGTCATAAACATCAATATCTGACTA CAATCTTAAAATAACTGAATTCTGACGTTCTGACTTAAGCAAACAGGTTA AACTAATGAAATAGGTTTGCTATAAAGCGGACCTTGACATGAACTAAGCA TGCGTATTAATTTCAGAACTTTATCTTTCTGTGCTTATTATGCTTGCTTA ATTCTCCCGAAATTTTATCTACGACATGGTACTTATTAGCAGTGACAAAG TATCGtggatttgaaaaatattataacaaactttttgtttggatagtatt ttttaaaatctattcGACTCTTTTAAATGCTTTGAAGATACTATTTTACA GAGCTCATAGAATATACATATTGCATTTTCAGTTTTCAGAATCTTTGTAT TAAGTAATTGAAGTCAAGGAGTCAAACATTACTAAAGTCTTCTTTGAAGT TAACCACTTACAGATTAAACGCCGACTAACAGTAGTTTGATTTAATCTCC CTAAGCAGTGTCCTAGTGTATTCCAAGCCCTTTTGATTTCCGAGTACCTT TATATGAACCCCCTCCAGGGGTTAGGGGTGCTAACGCTACCATTATTTAC AAACTCCCTGGTCCTTTTTGTTTTCGGATATgatgtttttcactttttga cgCATAAAGTATTGACGTTTTGTTTTGTAGAAATCATGAAGATTACAAAT CAGACGATCTGACGGAGTGTTACGTCACAATGCCTGACGAGTATGAATAT TCCATCAAATATAAAGAAATTGAAGCTACGGTATGATGcagtctttttga tttttcatttacCGATTATATGGACGCTCTTCCCAGTCATTtctttcatt tgaaaaaatatctctGGTAAATATCTCCAGGGAAGTATCATAAGGCTCAA ATGACTTATCCCTTGATCCTTGGTCTTTTTGTGCAGAGGCAAAACCCTTG TAATGTACGAGGATTTCGATTATGTAAATTCTCTTCCGCTTTTTCCTGGA AACACTCTATCCTCGAATGGTGCTGATGCCAGAGACTGCAATCTTCAGCG TTTCAACTTTTCCGACTTTAGGGGAGGGGATCAGTCCAGTTGAGAGATAA CTCTATCATTTCTGTCTTACCAGTGAGAGGGTTTTTGTTCAAATCCGCCC ATATTCACAAAACCTACTTTCAACACATAGGCAGCTTTGGTAATCTTCTC TCTTTTTGAAAACAGGCTGGCAGTGGGCATATGGAAGGTTCTGGAAATCT TTTACATTATGCAAAACAGTTAGCTGCACAAATATTCATCAAGGTTTGTG GTTTGCAATTTATCAATGACAGTAAATAAGGGTCTTCCGTCTCAGCGAGT TTAGAAAAAGAGGCTTTTTCGTCtcaaaattcagtaaaattcttcaaaat ttgaagtatCTTGCCGAATTTCTTGTATCACTGTGACGATACATTCGATT CCTTTCCTGTGCACTGATTGGTCTGACACAATTTCGGCATTCAATTAGGG TCAGCCAGATTGATTTTAATGTTGAGTAAACGagtattttctttgatttt tcagGAGATGTTTCCGTTATTGAAGTACTGGGGCTCGATCATTCGATTGA GTCGACAAAGGAAGCCAGTCGTAAGTCTCATGCAGTGGCCTCTCTCTAGT TCCATCTTCAATGgggcaaaaattttcatttcattaggGAAAAGTTCGAA TTACGTAGTGTTTTTATACAACTTGTCAGCTTAGGGGACCAAGGCTTTTA AGTTGAGGTTCGGATCAGAGAGAACTGACCGCATCTATTTTTATGAAGCT TGCTTCTGTATTTTACTACAAGAACACGTGCATCTCATTCGGTCCTCTTT TTTGTCCTTTTATTTCTTTGTGATTTTCAGACCTAAATATCCATAAATCT TTTTCGTAGCTCTTCAGAAAAAAGGGTGGAATAAGTAGGGGGGTGGGTAC TCCAGAtaaaaaccaacaaaatagGGGAGTCTTAATTAAGTGCTATTGac ctgattttgctaaaaattccaaggaaaatgaaggtttttggccaattttg gcaTTTCGTAGCATAAAGGTCATAAAATGGTCATAAAGTGAAAtggggtg attttttttcaaaaattataaaatgacCCCTCCTACGATTAAGCACACGA GAGTATTCTTgaacatttttgagaaattctctTCAATTTCGTTACAATTT CCTTTTCAGGCGAAATCTAACGAGACACCCAGCAACAAATACTTGAGTGC TATGAAAGACGCCATGAGAAAAATGACAAATGAATCTTCATGAGTGTAAT CATGTTGTTACGTACGAGTTGATCCGAGTTATTTCTGTTTTAAATATGAA TGGGTCTGAGTTGAACTCCCTAAAATACGTTGGAATGAAAAACTTATTTG AATTAAGTGTTTGCAATTAAATGTTTATATTTATTTGTTTTTGGAAGAAT TTGACGTTGTGTTGTGATCTTACAGTTTTTTTTCAACCCTGAAAATACAG TGTGTCCAGAAACAAGTTAACAATTCATTTTTAATAGAATAATTTATATG CATTATTATGACCTAATGACCTGTTATGGTTGTCTTCTATAACGATTTTA CTTTATTATAAAATCTGTTCCGCTTTTTTTCCGGACGCACTGTACACCTT TTATGCCATCATTCTTTCATTACAGTTTGCGTATCATCATCAATATTGAC TagcaatttttttaatgatagtGACGGAAAGTTGAAGGGTTGTGGAGCTC TAAACATAGACTTAGCAATACTGTAAGAAATCGACCCAGATCCTGACATC CATGGGAAATGATGGTAATTGAATATTTATTCAAACCGACAGGATGTATA TGTTTTCTTCTCAATGTTGCATAAATTTTAGTTGAGTATAGTCTTTGTGT GTAACCTTTAAATATAGTAGAATATCGTTTATAATCCACTTACTTTAATT GTCGTTAAAAGTTTTTATACTACGCatttttatattcaaaattgaaattt tactttTGGAAATCAAGAAATATTACATTTTAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00050872TCONS_00050872Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00050872-proteinTCONS_00050872-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_19supercontigscaffold_19:111275..120107 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.63 8.35 5.56 3.85 12.84 10.39 11.19 12.29 7.42 7.99 6.65 5.72 4.89 5.71 5.98 4.89 9.02 6.29 3.25 3.79 5.64 6.08 7.8 8.17 101.36 62.41 3.44 2.34 4.42 4.64