XLOC_032367 (gene) - C. hemisphaerica

Overview
NameXLOC_032367
Unique NameXLOC_032367
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_193:46818..49979-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032367 ID=XLOC_032367|Name=XLOC_032367|organism=Clytia hemisphaerica|type=gene|length=3162bp|location=Sequence derived from alignment at scaffold_193:46818..49979- (Clytia hemisphaerica)
CGCGAATGGTTTCAATCAAACTTTTTTTTAGGGCGTTCGCGAAGGACGCA
AAAGCATTCGTCACGAACGGGTAACCCGTTCGTCGCGCATGGAAAAGCGT
TCGTGTGTCCGAATCGAACGGTTTCTGACCCAGTAGTGATGCCACGCAGA
GGTAAAAATGATTCACTTGGTTTGTTTCCATAGTTCCCATATTTTCGTAG
GAGCGTCAATGGTTTTCTTTTTTTAAATTTACCTTCAGCTGTTCCATGCG
TAATATTGTGATTTCTTGAAGTGCTTGTCTTGTGGTTAACCTTTAATTGT
TACTATCAACATCAAATTTTCAGGTTTGCGAGCTCATCCTTTGATCAATG
GACAAAGATTCACAAAAGTTACGGCAGCTACGTCAGTGCATTCAATCTTC
AACAGAAAGAATGATAATACGTGGCAGTACATGATCATGGGTTCGGATTT
TGTGATCGATCTACTAGCCATCATAGTCATAATGAAACCTTTGCGCACAT
TGATATTGCTTGTTCAGTCGCTGGACTGCCCAGTCTGGAAGCTTAAAAAG
CTCTATCAAACGGTGAAGAAACATTTGCAACAAGCATGTAAGAGTTATTC
TGTAATTTCTTTCCAATTCTTTAAATTTCGACATCTATTTAAAATTATAA
CATTGTTTAGGCCTACTTTAGACAGTAGACTCTCTGCTGACTTTCGTCAA
AATTGAGGGAAGGCAAGGCAGAAAGTCGGCCGTCTAAACTAGAGCTTAGT
TACATATCTTTCATAGTCAGGCTGTAAACATCGTTTTTGTAGCATCATCA
TTCCTTATAAAGCTTGAAGACTGCTTTAGATAAAACGGATGTCTTTTTTT
AGCTTCAAAATATGACAAAACAACGTACCCTACCCTTTTCAAACACAAAA
ATTCCCTTGAGCCTGGAAAAACGTTGCAAGATGTGACTTTGATGGAAGGC
TGGTTGGTAAACACGTCCCAGGGGAGAAGTGGTGTTAAATGGTACATAAG
AAACAAAACTGAGATCAAACGGGATCATTTACGGTAGATACTATTGTTTA
AACATTTTATATAAGTAACCAAAGTTTGTGTATTTTTTCTAATCAACTAT
GTTACCCACTTATAGACAAATCTCAAACTTGACACAGCCAGATTTATCAA
CATACCTCTAAAATACTGACTATTGACTATAATTATAATATATTCATTTC
ATTTCTTTTTTTCAGCTTCGCCAAAGATCTAATGGAATCCCTGGAAAAAA
TGATTACTCCAGTCTTGAATCAAGACCATATCAAGGCGCTTGAAGTGTTT
GATATGGGGGAGCTAGTGAAACTTAATTGTGGAACAAGGATTGGAGATCG
TATTCAATTTACAAGAGATGAAGGGGAGTACGAAGAATATGGTGTCATCC
AATGCAAAAAGTTTATGTCATCCGTTTGCAAAATGCCCAGCTTAGAAGAA
TTCGGCATCAATTTAGACCCTAGGCTAAGGTATTTGATTCCTCCTATATT
TATTGTCTTGACAGGTGTTTGATCAATCAACGACTGATTATAGTAAGTAT
GAGGGTATGAGGGGACTGGTAGTATTTTTAAGATACATTGGTAATATTAT
CAAATGAAAATGTTTTAGTCATATCATGATAATATAGAAATAGGTACAAG
ATCTAAAAATATGAAAATGATTTTTTACAGTTCCAAATACATGCGTCAGT
TGAAAGATGCAGTCCGTTTGGCAGTTTGGGATGGCCTCGTTCCAATGTTT
GGTGTGAGTGTTAAAGATGTTGAATCTATCTCTAAAATAGAAGATGAGCT
TTCTTTCGATCTCCAATTCAACCTTACATTCAAAAATGGAGAAGAAAAGG
AAGTCAAATTGAACGAGCAATTGGTCTATGAGAGCTTTTATAATAATGAA
AGCCTTTACAAAGTTGCAGAAAAGCCAGTATGTGCGATGATCGACATTGC
TCTGGCAAAAGGTGGACCTGAAAGCATAGCAGAATCGTACTATGCATGTA
TGCGTGGCCAGCAACAGGCTGGTGGTCAAAGCAACGACACATTAAGCTTG
AGAACCAAGTTATCGTGGTGTCTCCCATCCTTTGAAAACTGTCAAAACGG
GGGCTTACAGCGTCCCCCAGTCCCCCCTGAACAAAAAACGCCTACGGCGT
TTTACACGCCTCGCCGCCAGCAATTATATACCCTTGCCATACCATTAAAG
TTTTCACAAAACACCTTCTGCGTCAAATTTCGCCGATTCCATACTGGTTG
GTATCTTCGTTGCGTCACAGCGAAAGGTTTGTTTTTATTTTAGTTTGTAT
CTTTGAAAGACCCCATCGGATTTAGGCAGCGCTGTCGGATTTAGGACCTC
TCATGGAATGATTTTTTTGTCATGTTGTCCATACACGGTTCAGCGTATTT
GAGTAAACGCTTTTACGACAAGGATCATAGATACGCCATCGAATATTGGG
TGATTGCGGTCAGTAACATTTGTTGAGGAGGTATGCTGCGAAGAACAGAC
ACATTATTTATTATTGGACCTTTATTGAAGTTTTTGACTTTTCTAAAAAA
GCGATGCATTGTGGGATTGTTTCAAGTGTATTACAAATAGGAACTTAGGA
ACTCTTAGGAACTCCTCGAGGGAATTCTATTGTAATACACATCGCTTTTT
TAGAAAAATCAAAAACTTCAATAAAGGTCTATTATTCAACACGACATAAG
AAAAACTTTCCCATCAAGATTCAATATTAATATTATGTAGCTACGTATAA
TATAATGCAACACAAGAAGGGGGCAAATTGTGAATGTTTTGGTGGTACAT
GGGATGTTTTGTGTGTGACAAAACATGTTAAAGCAGCAATCAGAAAATAC
ACTTCCATTTTATTTTTAATTTTTTTATTAAGTCAGTAGTAGAAAATTTC
AAATTCACTGCTGCTGGTGGTCATTATTCAGTTCAAACACTTTAAATAAT
TTCCAAATAAAATAAGCTCTTTCACAGCATTTTCCTCATAATTCTTGAAC
ATGTTACTGGCAAAATGAAATGCATCCGTAGAGGTTCGCTTTTTTGATTG
CATGGATGTATGAAAACTAGTAGTGAATTTATAAATTAGTGATATTTTTG
TAAAAATGGATTTTATTCTTTACCACTTTTAGTCATAACATCCTAAACTA
TCAAAAAGTCCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00051066TCONS_00051066Clytia hemisphaericatranscript
TCONS_00051065TCONS_00051065Clytia hemisphaericatranscript
TCONS_00051064TCONS_00051064Clytia hemisphaericatranscript
TCONS_00051063TCONS_00051063Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00051066-proteinTCONS_00051066-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_193supercontigscaffold_193:46818..49979 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.3	0.47	0.38	0.3	1.47	1.03	1.31	1.92	0.89	0.44	0.33	0.86	0.96	1.03	1.74	1.99	2.32	2.36	1.88	1.7	1.68	1.36	0.55	1.34	0.31	0.49	1.42	1.8	1.98	1.62