XLOC_032467 (gene) - C. hemisphaerica

Overview
NameXLOC_032467
Unique NameXLOC_032467
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_20:191562..195605+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032467 ID=XLOC_032467|Name=XLOC_032467|organism=Clytia hemisphaerica|type=gene|length=4044bp|location=Sequence derived from alignment at scaffold_20:191562..195605+ (Clytia hemisphaerica)
cttttttgtactCGACTCAGGttcgaggagggcctcaaagtagaggcttt
cggaagaagaaaagggggCAGAGTTGGGTAAAGTGAGTGAGTTTAAaaat
actctttcacagcaaaaagcgttcgtgcacatcaattttggttagtcttc
tCTTCTCCCTCTTAAGTAGTTTGAAAGGAAGACCTGAGAAGACAGAGgtc
gtaagaactgcaagagggagaagaaaaggggacagaggtgggtaaatTGA
GAGAGTTCAAATATattctttcacagcaaaaagcgttcgtgcacatcaat
tttggttagtcttttttTTTCCCTCTTACGTAGTTTGAAAGGAAGACCTG
AGAAGACAGAGGTCATAAGAACTGCAAGAGGGAGAAGAAAATGGGgcaga
ggtgggtaaagtgagtGAGTTTAAACattctttcacagcaaaaacgTTTT
TGAAATAcgattttggatgccttttcttcttttttgtactCGACTCAGGt
tcgaggagggcctcaaagtagaggctttcggaagaagaaaagggggCAGA
GTTGGGTAAAGTGAGTGAGTTTAAaaatactctttcacagcaaaaagcgt
tcgtgcacatcaattttggttagtcttctCTTCTCCCTCTTAAGTAGTTT
GAAAGGAAGACCTGAGAAGACAGAGgtcgtaagaactgcaagagggagaa
gaaaaggggacagaggtgggtaaatTGAGAGAGTTCAAATATattctttc
acagcaaaaagcgttcgtgcacatcaattttggttagtcttttttTTTCC
CTCTTACGTAGTTTGAAAGGAAGACCTGAGAAGACAGAGGTCATAAGAAC
TGCAAGAGGGAGAAGAAAATGGGgcagaggtgggtaaagtgagtGAGTTT
AAACattctttcacagcaaaaacgTTTTTGAAATACGATTTTGGATGCCT
TATCTTCTTTTTTGTACTCGACTCAGGttcgaggagggcctcaaagtaga
ggctttcggaagaagaaaagggggCAGAGTTGGGTAAAGTGAGTGAGTTT
AAaaatactctttcacagcaaaaagcgttcgtgcacatcaattttggtta
gtaTTTACTTTTCCCTCTTAAGTAGTTTGGAAGGAAGACCTGGGAAGACA
GAAGTCATAAGAACTGCAAGAGGGAGAAGAAAACGGGTCAGAGGTGGATA
AAGTGAGTGAGTTTAAAAATGCTCTTTCACAATAAACAGCGTTcgtgcac
atcaattttggttagtcttttcttctccctCTTAAGTAGTTTGAAAGGAA
CCTGTCCAGAGAAGACAGAGATcgtaagaactgcaagaaggAGGAGAAAA
GGGGgcagaggtgggtaaagtgaaagagtttaaaaatactctttcacagc
aaaaagtgttcgtgcacatcaattttggttagtcttctCTTCTTCCTATT
GAGTAGTTTGAAAGGAAGACCTGAGAAGACAGAGGTCGTAAGAACTGCGA
GAAGGAGGAGAAAAGGGGGCAGAGGTGGATAAAGTGAAAGAGTTTAAaaa
tactctttcacagcaaaaagcgttcgtgaacatcaattttggttagtctt
ttcttctccctCTTAAGCAGTTTGAAAGGAAGACCTGAGAAGACAGAGGT
CTTAAGAACTGCGAGAAGGAGGAGAAAAGGGGGCCGAGGTGGATAAAGTG
AAAGAGTTTAAAAATACTCTTTCACAGCAAAAAGCGTTCGTGCACATCAA
TTTTGGTTAGTCTTTTCTTTTCCCTCTTAAGTAGTTTGAAAGGAAGACCT
GAGAAGACAGAGGTCGTAAGAACTACAAGAAGGAGGAGAAAAGAGGACAG
AGGTGGGTAAAGTGAGTGAGTTTAAAAATACTCTTTCACAGCAAAAAGCG
TTCGTGCACATCAATTTTGGTTAGTCTTTACTTTTCCCTCATAAGTAGTT
TGGAAGGAAGACCTGGGAAGACAGAGGTCATAAGAACTGCAAGAGGGAGA
AGAAAATGGGgcagaggtgggtaaagtgagtGAGTTTAAAAatgctcttt
cacagcaaaaagcgttcgtgcacatcaattttggttagtcttttcttttC
CCTCTTAAGTAGTTTGAAAGGAAGACCTGAGAAGACAGAGGTCGTAAGAA
CTACAAGAAGGAGGAGAAAAGaggacagaggtgggtaaagtgagtGAGTT
TAAaaatactctttcacagcaaaaagcgttcgtgcacatcaattttggtt
agtctttacTTTTCCCTCATAAGTAGTTTGGAAGGAAGACCTGGGAAGAC
AGAGGTCATAAGAACTGCAAGAGGGAGAAGAAAATGGGgcagaggtgggt
aaagtgagtGAGTTTAAAAatgctctttcacagcaaaaagcgttcgtgca
catcaattttggttagtcttttcttttCCCTCTTAAGTAGTTTGAAAGGA
AGACCTGAGAAGACAGAGgtcgtaagaactgcaagaaggAGGAGAAAAGG
GGgcagaggtgggtaaagtgagaGAGTTTAAAAATactctttcacatcaa
aaagcgttcgtgcacatcaattttggATAGTCTTTTCTTTTCCCTCTTAA
GTAGTTTGAAAGGAAGACCTGAGAAGACAGAGgtcgtaagaactgcaaga
aggAGGAGAAAAGGGGgcagaggtgggtaaagtgagtGAGTTTAAACATa
atctttcacagcaaaaagcgttcgtgcacatcaattttggttagtctttt
cttctccctCTTAAGCAGTTTGAAAGGAAGAGCTGAGAAGACAAAAgtcg
taagaactgcaagaaggAGGAGAAAAGGGGgcagaggtgggtaaagtgag
agagttcaaacatactctttTACAGCAAAAACGTTTTTGAAATGCGATTT
TGAatgccttttcttctttcttctactCGACTCGGTTacgaggagggcct
caaagtagaggttttcagaagaaaaaagggGATAGAGGTGGATAAAGTGA
GTGAGTTTAAAAatgctctttcacagcaaacaGCGTTCGTGaacatcaat
tttggttagtcttttcttctccctCTTAAGTAGTTTGAAAGGAACCTGTC
CAGAGAAGACAGAGGTCATAAGAACTGCAAGAAGGAGGAGAAAAGGGGGC
AGATGTGGATAAAGTGAGAGAATTTaaacatactctttcacagcaaaaag
cgttcgttcatatcaattttagttagtcttttcttctccctCTTAAGTAG
TTTGAAAGGAAGACCTGAGAAGACAGAGgtcgtaagaactgcaagaaggA
GGAGAAAAGGGGTCAGAGGGTGGGTAAAGTGAGTGAGTTTAAAAATTCAA
AGAGTTCAAAAAGCGTTCGTGTACATcaattttggatgccttttcttctt
tcttgtactcgacTCAGTTTCGAGGAGGGCCTCAAgtcaaagtagaggct
ttcggaagaagaaaagggaacagaggtgggtaaagtgagtgatttaaaaa
atactctttcacatcaaaaagcgtTTTTGAAATGCGATTTTGGATggctt
ttctttatttttgtactCAACTCAGTttcgaggagggcctcaaagaagag
gctttcagaaaaagaaaaggggacagatgTACTCTAAGGGTAGAGAATTT
AAGTTAAGCAGATATAAATCATTTATGGTGAAATGTCGGTGAGATTCCTT
CACGGTTGAAAAAGTTTAGTTCAGTTACCGCTTGGTCGAATGATTCGTCT
TTATCTAGATTTCTTTTTTGCTCATTTCTACGGGAGGGAAGTTTTGAGGC
TAAAACGCAAACGTCCATATTTTCTCGATGAAATATGCGGTAGCTTGGTT
ATCAACTTATGGCAAATCGATCATAATAGTTAGCATAACTTGTGCAGTCT
GTGTTTCCATAATAAATCACGGGtttcacttaaaaaatatttccactTTG
AAACTGTAATCGATTTCAAATTATAGAGAGATTTTtctctgattattttc
aacgtTTTAAAGTCATGATTTGATTGGTTCCAGCTTCATCGAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00051218TCONS_00051218Clytia hemisphaericatranscript
TCONS_00051219TCONS_00051219Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_20supercontigscaffold_20:191562..195605 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.89	1.05	2.77	2.24	0.44	0.25	0.54	0.45	0.36	0.74	0.43	0.41	0.19	0	0.13	0.52	0.28	0.29	0.25	0.1	0.18	0.13	0	0.15	0.3	0.9	0.71	0.28	0.1	0.27