XLOC_032474 (gene) - C. hemisphaerica

Overview
NameXLOC_032474
Unique NameXLOC_032474
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_20:73461..80436-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032474 ID=XLOC_032474|Name=XLOC_032474|organism=Clytia hemisphaerica|type=gene|length=6976bp|location=Sequence derived from alignment at scaffold_20:73461..80436- (Clytia hemisphaerica)
ACGTCTTAGCAAAATAAGGACAAGTTGTGCTCTGCTGTCAGGTTTGTTTG AAAATTTCTTAGAAAACTTCTTTACTTTGCTTTAACTTTGCGTTGCTTTG TTTTTTTTTTTTTGCTGACAGAACTTTCGCTTATCTTCAGCAAAAACGTG CAATAAAGTCCCTGTATTTCAAACAATCTTTTTCTGCTCAGTCATTTCCA GTACAGTATTTTGTTTTTGAATTGCCAATTACATCAAACGCTATAAGGTA CAGATTCTTTCTTTATAGTTATCAACTTTTTCCTTCGATTCTTGAATCTT TAACATGTTTTAGCCTACTATACCTTAAAGGTTTTGTTTTTAAATAAGGG TGATATCGTTTGCTTACTCATCAATTTTAATTCACAAGCTTTTTCACATT GGATTGACTAGATGTGGAGCAAGATTGGTTAGAAAGAGGAAAAGAGAAAC ATTTTTTTGCCTAAATATCAGCACAATATAACAATTTTTAGATATGATCT ATGTGTCTGATATGAAACGAAAGCACTTATGTAAAAATAAAACCTTTAAC TTGACTGAAACCATACATTACTTTCCTTTATCATCTTCCTTATTTTAGTA GCGCCATAAATTCGTTTTTCCTTACATTTCAGAATGAATAATAACAATAT AATACCATTGACCACACATCACGACTTGGAATTACGTATAAAATGTTTAC TATTGAATTGTCAATCGACGTTAGCAGACCTTCTTCGATATTTCGTTTCT CAACCATGGGAAGACATCCAGCGTCGTCCAGGTGATGAAGATTTTAAGCT TCAAGAGATTCTGAAAGTATCCAAAAAGATTAACGATGGTATCTTAACAA TTACTGTGATTCCAGGAAAAAAGACTTTTGCGTTCGATCCCTTGGCTGAA AAAATTGAAATCGACAAACTAGAATCTGTAGAAATTTGTGCATTGTTGTT ATCAAAGAATCCGAGGTTTATGAGGAGTATTCGGTGTTGTTACAGATCAG AGCATCAATGTCTAACCTGTATTGGAAGTTCACTGGAACATCACATAGAT TGTGTTTCTTGTTATAAAAAGAGATGTACTTTTTGTGGACAAGATTCCAA AGAAGAGATTTTCATCAAATACTTAGTATTGATCAGACGATTAGCTGAAT TAGTATCCGATATCCAAGACCCTGAAGTTTACGAGTGTTTCCGGCGTGGC GAAGCAATTCTAGATAAGGACCAACTAACAGATTTCAAGTCTTGGGAACA GCTGTGGCAAGGTGTCCAAAAAGGCTTTGCAACATTCAATGATTTCCTGG TCTCGACTAACCAGATTCGTACTTGTGATTGGAAAGATCGCGATATGTAT GTTCGGATTGTTCTCAAGGAGAGAATGGAAGTACTACAGTTGATGTTTGG TTCTAAATGGCGACAGTTGATGTTGAAAGAACCAATCAATAATCGAATAC ATCCTGGAGGTGCTATATCTAGATCAACCACCGTCAGTAATAGCGATGTA GCACTCGATATTTCATCTCACCAGGAATGGCAAACACCAGCTCGTCAAGG AAACGTCGATATATCAGAAGAATGTAAGAGCTCTAGTTTGGTAAAATCTT CTCTCTTCTTTGATTGTCAAACGCAAAGCTTTGATGTGCCATCTTAATGT TGGAAAAAGCTTTCTTTCAATAAAAGTACATAACTCAAAGTTTCGTGCTT CTGCACTTGTTCAAATGTACAAGAGAAATGATCTAAAAGACTGCATGTGA AAAGTTAAAAACTTTGTTACAAAATGTTTGTTAAAATGTTACAAAAGAAT GAGATAAAGGTAATTAAAACATTTAGCTTAGATATCGTGAGTTCTGCCTA TAAGTCAGACGATCCTATCGTCTACACAAGATCACTATAAAAGGGAATAG TTTAGGAAAGGCGTAATAAATTCGGGTGGAGTAAGAAGTGTCGGAGATGT TTACAGTGTACGTTTTGTTCCAAAGCTCTACCGCCACTTTTTTCCCGTAA ACCGCCCTGACGCCCTAACTCTTTCCCGCGTTTACTGGCCTCTAAACGGA CGATAGTATCGTCTACCTATAAGTCACCAATCTTTTGGAATGTTAAATCT TCATTTCTATTTCCAGGTAAAGCAGAGAGGAATCGGCGAGAAAATAATCG TCTTCTTAACATTCAATCAATGCCGGCGGTATTAGACGAACGTGTTCTTT CGGACGTCTATGTGCAAAATGATCCACGGATAGGTAATCAATTCTGTTTA TATTCTTTTACATTGGTTTAGCCTGTATTTTTTGTTTGTCGTTCTAGTCT CAATTTCCTATCCAGGGATTTTAAATCACAGAGAATATCGAAGGGAGAAG AGGGAATTTATTTCACAATTTGAAAATTAAAATGACGTTTTCTTTTAGTG AACCAAACAGTTGAAACAACTCCTGAGTCTACGAAAACAGAAGATGAATT AAGTGACCAGTATAGTTCAGCTATATCAGAGTTTAACAACAGCAATTCAA ACCTGGACTATTCATCATCATTCATGGAAACTAGCAGTGCAAACTCTTCA ATTGCCAACCAGTCCACACCACGAACTGACTTCCACGGAGCTTTTCGGAT TCAACAAAACCTAGCGACTTCTTTACCAGCACAAAATAACACTCATAAAA AACCTCTTGAAGAGATAACAGCTCCAAACCGTCAACATTTTTCGAATCTA ACATCAACAACTGAAGCAGTTTACGCACCTCTTGATACAGAGGATACTAC AGAGTATGCTATCCAAAGCTACCAAAACACTCAAGAACCATCATCTTTCG GTTATCACCAAGGTATAGAATTCTCCATTGGAGATGCTATGCAGGCTGCA CATGGCTTGGATCATTTGATGATGCCAGGGCCTCTAGTAGGTGAATCAAC TAATGCTGAACAAGAAGGAGATATTGTTAATAGCGCCCAAGTGTATTCAC GCCCTGATATGGGCACGCGGTAAGTATAAAACACATCACGTATATTATAA GCAAAAAATCAACGAAGAAATTGAAAGTTTTCATTTCGAATGTGACTAAA ATTCTCAGTGTTTTTCACCATCTATGATTTTAACTTTTTTTTGTAAGGTC TCCTCTATATACGTCTATTTGGGAATAAATACAAAAGTTCTGATAATTTC CGCTTACAAATTTACCACTGCAAATACTTTTTCTTCTAATTTTCTTTTTC TTTTTAGATTCTGTTCTGAAACACAGGACGATGAGGGTAGGAATTTAATT TGTTTTCCATTTTAAATCATTATTTATATACATACAATCGCATGTTCAAT TATTGTTAGTTTGAAAAATTAAATTGTTTTCAGAAATATAGAAACTTCAA AATTAAAAGTTTATTCGAAAGTTTAGACCCTGGTAAAAACGAATCTCATT TACCTACTTTCAAACCTGTTTTTCCATTTCTCAGAAAGGACCGTTCAATC TATTTCAACATCGATGCCTGCAGTTGCTCAACAAAACCAAGCTGCTGCTA CGATCGTACCAGAGAGTATCGAGGATTTATCAAGTGCAAAACTACTTTTT CTTCTCAGAGGGTTACCTGGTAGCGGAAAAACTACAAAAGCGATGTAATG TTTCACTTTTCCTTAACGATAACTTACCTGTTGCCTGGTAACAAAATTTT TCAATTGGAGAGATTATAAGAGAGTCTAAAAGTTTTGAGCAACCTATTAA AAAAAGCATCGTCGTCCAAAATATTTTCAAAACTTCATCTTTCTTCTGGA AAGTTTTTGAAACTCTAATTCTGGCATAGAGTGATATGACACGTTTCTTT GTTTTCTTAATGATAGGCATTTGACAAACAATGCAGAAATGGGTGTCATT TTAGCCGCTGATGACTATTTTACCAACGAACAAGGGTAAGTATTGTATTT TTGCGACGATTTGAACTCTCTGCTTATTGTAGGTCGGGGTTTGACAAGTT TGACTTAGTCCTATTAAAAATTCCTTTTTAAAGCAATGGATTCTACTATT TACTCTTGATAGTTTTGTCGTTTTTGTTAAAAATGTACGGAAAATAAAGT CTTTTGAAACACACAGCATAAGAGGCTAAACTTGGGAGGAAAGAAATCTT TCTAAAAAGGGGAGTGGTATTTTAGTATTATAATTTGGTTAGATAATCAT TTCATTTTTACTTTGTAGTGTCTACACTTTCGATAAGAGTAAAATTAAAC ATGCTCATGAATCGTGCAAACAAAGAGGTATTGTTTTCTAAAACCTTTTG GGATATTGTTTTGAATGAATGTCACATTTTTCTGATTACATTATTGCACG TATTCTTTTATCATTTCGTCAAGCTCGACAACATCATTTAGAAAACTATC ACTATCATTTTAAAGGTAGGAAACCTATACTCTGGATCACTGTCGATGAT TTGGGGTATTTTTCGGTGTTGTCGTTTCTTCGCTATTAGATTAGATAACT TCTTTGTAGATTTTGTTATTTTTTCAAACGAGTTGTTACTCTCAGGTGTC TAACAAACAAGGGAGAGTTGGAATAAACGGTTGGCACCTAATTGACGGGG GGTTTGAAAATAAGGTAATTATAAATTTAAAAGCAGGCTATTTGGAACAA AATAAGAGACTAATCTTTCGTTGGCTGAAAATGTTTTCAAAAATAAGCGG GGGCGTTTATTTGAAACCTAACAGTACTAACTTGGGTTTTTTGTTTGATC ATAAATTCTGTCCATTTCAACGATTGTTCGGGAGACAGCCAGTAAAAACT ACCAGCTAGATTTAAAACGGCTCGTTTTATATCGTAATAGTGTAACATAG TTTTAATGACTTTTAATGACTTTAATCGTTTTTAGACTGATAAATTTGTA TTTTTTTGAGTTCTGATTTTACTATCTACAATGGCACTGATGATGGCATA AGACCGAAAAGCTTTTGCTTTTTAAACAAATGTTGTTCTCTTTTTTCATC AAATTGATATGGCAAACGTATCGAATTCGAATTAAGTAAAAAATTGGTCA CAATGTGTGAAGCATCTTTGGAAGAATGGCTGTAAATTGTAGCTTGAAGA TTTTGTATCAATTATTGACCATTAAATCCACCAGGGTGGTACACGTTTTT GAAGCTTTGAATGTTCTTGACGAATTCTTTGATCATTGCTTTTCTGCTTT TTTTCCAGCCAAGTCGAATATGGAGAAAGGTGTTACGCCAATTTGCATCG ATAACACAAACACTCAAAAGTATGAAATGAAACCTTACGTTCTCATGGTA TGAAATTATGTCTTTTTTTATTATCATCAACATTTACAAATATTCAGTTT CCCATTAACTTTTATTGATTTTACACGGTTTTGAATATCTTCTATTTTTT GACAGTAATAAAAAAGGATTTGTCAAATATGTTCTCCTATACATCAATCA GGTGTTTTAGCTTATCGAACAACCATTCCACATTCTGCATGTGTTGTAAA TAGTAAATAGTAAACAGTGATCTAAAAACTGGATTTACTGGTCTCGAATC TCCAAGTGGATGAGTTTTATTCTCAAAGCCGACTTTTGTTTTGTTACATT TCTTTCACTTCAGGCTGAAAGACATGGTTATAAAGTGAATTTGGTGGAGC CAACGACAGAATGGAGATTCGATGCAGAGATTTGCCACCAGTAAGTTTTC AATAATCATTACACAGTAGAATCTCTTTAGCTCGAACCTCTTAAGATCTA ATTTCTCCTAACTCGAACAAATTTTCTTGTCCCTTCAGTTAACAATGCCT CATAAACCTTACTCTATAACTTGAAATTTCCTTAACTCGAACAAATTTTT GTTCCTCGAGCGTGATCGAGTTATGGAGACTCAATTGTATATGATATTTT ATACACAGATAGCAGTTTGATATGATACGGCCAAATAAACATATAAACAT ATAAAACCAACCTAAAATCATCTGTTGTAACCTACTATACACCCCCTTCT CACAGACCCGGTAGGATTCTTTGAGCCAGTGGTAGTAAAATTAACTCATC CTATGCTTTTTCATGATTGGGGATTTCAATTCTTTTGTTTTCAAGTCAGA AAATTCAGTTGGACGGAAAAAATAGCACAATATTTTGCAGTGAGGATTTG CTTATCTGGTTATTTTCAGTGAGGACAAAATAAGAGTACAATTTTCCACT AAGGACCATATTTAGGCCAATTTTCCAGTGGGAAGGGTTCCCAGTGGGTC TGTATGAATGGCTGCAAGTTTTGACCATGAAAAAGTCCCGCTGAATGTTC TGAATTTATTCTCTTTTATTGTAAACTTGTTTTTGTAAACTCTCTTTTTT TTGAATTTATTCTTCTACAGAAAATCTTCGAAGAATCATTCATTGAGAGT GGAAGACGTAAAAAAGATGAAGAAGAGATATCAAAGAAATATTAAAATTG AAGACATTAAAAATTGTGAGAATCCACTCAACAGAAGATAATTGAAAGCT TAGAAAAACCCGATCTATTGGAAGGTCTTCATTTAATTTGAGATTTGAGC ACACGATCAAAATGTCTGATTTTGAAATTTTCATCATAAGTTTGGCCTAC TGCAGCTTTCATTTTTAGATGCAACAATTTGTTGAGATCACCAGGAGATG AATTCGGACCTCATTCTCTATAGTGTCATTGATATGCAATGTCAACGGTT GACATGTTATGGAAGGCTCAAAATACATATTCATCGGTTGTCGGTTGACG GTTTTATAGCATTTAAGTAGCACCTGCCGGAGCTGGAATGTATTACATCC AAAAAACAAATAGCTTTCTTGGGTGGTCTCAAAATGCCATATAGCAATTC GTTAATATTCGTAGTTCTTTTTTTTCATTGTCTTTTTTCTAGGGGGTGTA ATTTTTCCTTTGCAAATTTTGTAAATGATATTTCTATATAAGATTTTGTA TTATAAGTTGAATTTTAATTAACATTTTATATTTTATATTCAAAAATACA TTACATCTCATACCCGACATGAGGGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00051231TCONS_00051231Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00051231-proteinTCONS_00051231-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_20supercontigscaffold_20:73461..80436 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.35 5.39 2.79 1.71 13.57 9.46 15.74 19.34 10.6 25.81 9.58 8.41 17.95 17.49 20.63 21.3 11.27 12.02 17.23 21.64 10.24 8.77 11.16 11.69 20.77 26.18 13.8 9.51 8.74 8.01