XLOC_032556 (gene) - C. hemisphaerica

Overview
NameXLOC_032556
Unique NameXLOC_032556
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_201:150399..155276+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032556 ID=XLOC_032556|Name=XLOC_032556|organism=Clytia hemisphaerica|type=gene|length=4878bp|location=Sequence derived from alignment at scaffold_201:150399..155276+ (Clytia hemisphaerica)
caggaaaccATTGAATCAAAGATCTTCTACTCAAGTTTGATTCTCATTGC TGTTGGGTCAGTTTCAACCAAAAATCTCATCCTCGTTGGCAAgaatcaaa aaacatttttaacgcATTATACTGAATTTCACACACccaaaatccaacat tgtttCTCAAAGTGTCATTACGATAAATCATGCTACTCTTTGGAGGTTGT ACAGACTACATTATACCATTGCAAGTTCCATAACCAGTTCATTAAGCGAT CAAACCGAACAACAGAATCGAACACAAATATCTACTCAGAGATACGAAGT TGTGACGATCTCTTCGATATTGGTATAAGGAATGCAGGTGCttatgaaat gaattttatgggTGAAGGCAAAAAAGTGATCCGATGTTATTTTGATGAAG ATGGTGGCTGGCTAGTGTTTCAACGAAGAGTTGATGCTTCAGTGAATTTC AACATTGGATGGGATTTCTACAAAAATGGTTTTGGTGACCCAAGAGGTTG GTTTTGTACTTTTCTCATgcctttctttttttcaaagtcCGCCCAAAATT GGCTGtataacagacggacggacggacggacagacagacggacagacgga cagacggacagacggacagaTCGGACAGATCGGACAGATCGGACAGATCG GACAGATCGggcagacagacagacagacagacagacagacagacagacag acagacagacagacagacagacagacagacagacagacagacagacagac agacagaaatACCAACTATGCTAATAAATAAACTGTTTGTTTCTATTCTG TTAGGGAGCTTCTGGCTTGGTAACGATCTGATTCACGAAGTGACCAGTCA AGCACAACATCAAATCAGAATCGTTCTGACCAATTTTACTGGAGGTGTTA GTATTTCAAAATATGATCACTTCGAAGTCGCAAATGAGGCAATGAAATAT CAGCTAACAGCAACGGGTTTCACTCAGGGGTTCAAGTTATTCAAACTCTG CGATGGTATGTTTTTTACTACAACAGATCGCGACAATGATATAAAGCCTA CCGGAAATTGCGCTCAACGAAAAACACGTGGTGGTTTTTGGTACGACAAT TGCGGTAACTTTTTTCCTAATGGTGTTTACTATGAAGAAAGTGATTCGTT TAAACCTGACCCTTATTTGTATCATGGCATTAGATATGCAAATTGGAACC GTCTTTATACTTTGAAATCAGTTGAAAtgatgatcaaaagaaaagagTAG CGCATGACTGGGTGGCTTGAGAGAACTTTGGAATTCTGGACTTAACATGa cgatttttttctaaacaactTTATTGTAGATCCTTTCGGAGAGGCAGAAA TGCCTGCGAAGGGGAAttcataaaatatttaaataaattaTTTGCAGAAC CCCATATTCCGATTTTTTAAAAGTTCCGTAACTTAAGTAAAAGCGGCCAT TAtatggaaaaattcaaatttgtaCAAACGATTCCTTATGCAAATccaac gtttgcttccataatttTAAGAAACCTCGACTTTTCATCGACAAACTTGA TCGAGAAATAAAACTGATGGCTCAGCAAAGGTCTGGTTGCCAAGGGAgaa gggggtacttaggcaaacggagggtacggtatgttcCACCCTTAAGGGCa cattttttggatttccaaagtcccactaaggTCGGGGAAAtcacaaaatc aaatttcagtcccactaagggtcggataaataggaaaatttcatcttttt acCCCTgtaaagatcgaaatttggtcaaaattggtcatatTTGTCCCGAT AAGGGTcgtaattcaaaaattttttctttgttttctctatTTTAGTCCCA TTAAGGGTCCAAGgtggtcgaaagtcgggcggcaccccccccccccNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNcccccccccccccccggcagctcgcaaccctagtacccc cgggtaCTGATGagtctcaaaaaaaaaacttttatcatGAACAGCGtaaa taaacatatttttataagtcttcaaaacaatggaaatggaaagaatagta taatattttgtagtgaggattggtttaatTGGCTGTTTTCAGTAGGGGAA AAAATTGAAGGCTAATTTCCCATGCTACCAGGGACGATAATTTGGCCAAT TTGTCAGTGAGAGGGGGTGTTTAATTTATGACCAAAAActctcaattttt ttcttgtacacgctttttttttttataagaataNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNgaataccgtaagaatatttttggatg attttcgccaaaaagttaagaatatccatgatgaaatgaaaaacaccatt cttataaaaaaaaaagcgtgtagttgtAAATCTTTAATTAGCTTTCATCT CAACAACTTATTTTTCCCAAGCAGTTTAAATATTAGGCGAAATTTTCTAC TTAAATTCGTCTTGTTAATTATTCAATGACTTATTCATATAAGTTGTCAT CGAGTTAGTTGCATCAGCCATAACCATAACCCAGCAACTGGAAGAGAATA AAGTAAGCTGATAATGAAACAAGCattgaaatgaatttgaatttgtcaTT TGTTTCTCTCAataataaatctaaaattaagtttttaatttgtttttctt cttcattttcgcaAGGAACATTTAATAAAGTTTCTTGATTTGACCAGTCT AGTTTTGAAGAAAGTTCGTACACAAAAAAATGGTAAGTTTGAACTTGGAC ATTATCAGTCAGAACCACTATatagaaatggcaactattgccttaacggg aaggtgaaaaacttcccgaaatggaTAGAGTTTCCGAATCAGGAAGTTAA CCAGTTATTCCCGATCGGGAATGTGACCTCTGCGCTCTCCGGAAAAGGTC GTGGAAGGTAAATAGCTGATGCctattgtaaaagagggtgaatAAATACC TTTCACCGGGTAGTTAAGAAATCTACTGGGTAATcgcttcttaattctac tttccccattcccaattaaaaacttccctatttggaaactttttctcgat cgaggagaaacaaaaatttgctttgtttacaaaattatatttcccGTTTG GGAacgatgaaaagttcttgaccaaaacgggaaacaaaaaagtgatgaaa ttttcaatctggaaaaagtttccttttcgggttattttcaccttcccgtt tgggaaatatttcccgttaaggcaatagttgccatttccatgtagtggtt ccgactgATTATTAAAATAAGATAATGTACTTTCGAAGTTTTGATCTGTT AAATTACTtccaaaatttaatttattcacAAAAAGTGGCAATAATACTCT AACGCTTTCAAgtctaaatttttttcaataatcttAACTACAATATAGAA TCTCCATAAATAGAATACAAGTTTTAACTAGGAGTGCATCAGCTTTTGAG GAGCTGGTAACTAAAATACAAGGTTAAAACGATAAGATATTTCATCATAT TTCCAGGATggaaacatcatattttcaaaatatttctaaattttggaaat atcatatttctaaAAGTTGGAAAtactttgaaaatatgatatttaaaTGA ATTACATATAAtacaaatatataaaatatagaaaagtcatatttacATAT TTTTCGCACAGTGCTGCTCTTCTGTACTTGCATTCTTCCTTTTATAAAAT TCCAGGAAAATATTGGATCAAAGATCTTTTACTCGAGTTTGATTCTCATT GCTGTTGGGTCAGTTTCAACCAAAAATCTCATCCTCGTTGGCAAGAATCA AAAAACATTGTTAACGCATTATACTGAATTTCACACACccaaaatccaac attgtttCTCGAAGTGTCATTACGATAAATCATGTTACTCTTTGGAGGTT GTACAGACTACATTATACCATTGCAAGTTCCATAACCAGTTCATTAAGCG ATCAAACCGAACAACAGAATCGAACACAAATATCTACTCAGAGATACGAA GTTGTGACGATCTCTTCGATATTGGTATAAGGAATGCAGGTGCttatgaa atgaattttatgggTGAAGGCAAAAAAATGATCCGATGTTATTTTGATGA AGATGGTGGCTGGCTAGTGTTTCAACGAAAAGTTGATGCTTCAGTGAATT TCAACATTGGATGGGATTTCTATAAAAATGGTTTTGGTGACCCAAGAGGT TAGTTTTGTACTTTTCTCAcgactttctttttttcaaagttcagacagac agacagacagacagaccaACTATGCTAATAAATAAACTGGTTGTATTCTT TCTGTTAGGGAGCTTCTGGCTGGGTAACGATCTGATTCACGAAGTGACCA GCCAAGCACAACATCAAATCAGAATCGTTCTGACCACTTTTACTGGAGGT GTTAGTATTTCAAAATATGATCACTTCGAAGTCGCAAGTGAGGCAATGAA ATATCAGCTAACAGCAACTAATTTCAGTCAGGGGTTCGATTTATTCAAAA GCTGCGATGGTATGTTTTTCAGTACAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00051375TCONS_00051375Clytia hemisphaericatranscript
TCONS_00051376TCONS_00051376Clytia hemisphaericatranscript
TCONS_00051378TCONS_00051378Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00051375-proteinTCONS_00051375-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_201supercontigscaffold_201:150399..155276 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.17 0.17 1.08 0.62 0.12 0.15 0 0.1 0.14 0 0.79 0.23 7.66 7 1.81 0.82 0.39 0.69 6.11 6.11 1.15 1.09 0.85 0.63 2.21 1.78 0 0.12 0.1 0